Basic Information

Gene Symbol
-
Assembly
GCA_018153365.1
Location
JAECXW010000116.1:9547776-9549876[+]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.6e-19 3.2e-16 59.9 2.4 1 87 3 94 3 94 0.84
2 6 0.86 1.7e+03 -0.2 0.0 43 61 157 172 143 186 0.64
3 6 5.8 1.2e+04 -2.8 0.1 49 56 349 356 332 380 0.58
4 6 0.59 1.2e+03 0.3 0.3 22 62 417 457 389 478 0.64
5 6 0.23 4.6e+02 1.7 1.8 49 62 487 513 471 540 0.63
6 6 0.14 2.8e+02 2.3 5.4 31 62 552 590 518 607 0.46

Sequence Information

Coding Sequence
ATGAGATGTGCCGTGCCCAATTGCAGGAATGCTTTTGTCAGCAAATCAAAAAGGGATCCGGATCAACAGCATCAGATCGGCTTCTTCCGGTTTCCCAAGTGCCCAGAAACATTCAAACTTTGGCTCGCATTCTGCGGCTTCACCGAGGTCTCCTTGAAGTGGAAGAATCCGTGCATTTGCATTGAACACTTCAAAGACGAGGACATCGAGGGCTCATTAAAGTTCGAAATGGGACTGGCCAAAAAGAGAACGTTGCGACCGGGTGCGGTTCCCTGCATAAACAAAAACCAGGAAAGTCCTTCGGAAAGAGCGCGAAAAGAACGGACTCAGCGGCGCAGGAACCAAAAACTGGTGTCCGAACTTTTGGCAGAAGATGACTCCAAGTCGAATGCTCTAGCACCGTCCACGGTTGTCTGTCCAGAACAGGATAATATGGATTTAGCAGAGGCTGTAGCAATGGATCAGATGGAGAAGCGGGAGAGGTGTCGCATCTGCTACCAGGACTTTGTCGTGGACAACAGGGCAAAGGATCTCTTTGACCAGGCCAACAGTATTCTGCTCTTCCACATTGAAGTCATCAGCGGTGTTTGGATCAGCCACAAACCAGCCGAGCCTCAACTTATGTGCCCTGCTTGTGTATTATCCCTAGACCAGGCCATCGATTTCCGAGAGATGTGCATCAGCACGGAGCTTAGGATCAGTCAGTCCAACCCCTTGAACAAAATGGAGCCATCGAAAATCGAGCTTAAGGATCTGAACGAGGAGTCTTCGACATCAGATCCCGAATTGGGCTCGGATTCAGACTTCACAAATTTAGAAGAAATTGAAGAAGTCGCAGAAGATGAAGAGTGTGCCGAGGATGAAGCCAATTTGAATGACCAGTTGAGTCAAGAGCCATCCATCGAACCCGATGAGCCCACCTCACAGGATCCACTCAGTGTGGCTCTGGGGGCTAAGATCTTTAAGGAATTAATAGACCAATACACTGGGCATGAAAGAACTAAACTAAAAAAAGAGGAGACGGTTCCGAAGAAGACTAGGTCTCGACAAACCGCAGTTTGCGAGCAAAAGCCAAAGCGCAGGGCCAATCCCAAGACCAAAGAGGAGAGGAATCTCATACGCCGCGCCCAGCTGCGAGCCAAGCCGCCGAACTTTGTGTGCGACCAGTGCGGTCAAGCCTTCCGAATGTCCCATAACCTCCGCATCCATATGCTCCGGCACACCCGCACCAAGAACTACCAGTGCAGCGAGTGCCCGAAGACCTTCTACGACGCCTACATGCGCAACATACACATCCGCATTCGACACCGTGGCGAATCGCCCTTCGCCTGCCGTTTCTGCAGCGAAACGTTTGCCTATGCTGGAGCTCGGCAAAAGCACGAGAGTGAGGTCCATAATGCAGCGCCCCGCCTGATAGTGAAGCGAATCAACCCAAAGCCCATGGCCAAACCTCGGGATGACGTGCGTTACCAATGTAAGCTGTGCCACAAACATTACGCTTCCAAATACGCATTGGGCTGGCACATCAAGTCGCACACCGATGCGAACGCTTTTAAGTGTAAGCAGTGCAGCAAGAGTTACTCCGATCCCAACAAGCTCAAGCGCCACGAAATGACCCATGAGAAGAGGCCGCTGCAGTGCGACGTCTGTTTGAAGGGATTCTACCAGCGTACGCGACTGCGGGAGCACGAGCTTATCCACACCGGCGAACGTCCATATTGGTGCGAGGTGTGCAATGCTCACTTCCGCTACAAGTACAACCTCAAGACGCATGCCAACAGCAAAATGCACCAGGAGAACGTACGCAAAACTGGCGGAGTACTAATACATGAAGCAGAATGA
Protein Sequence
MRCAVPNCRNAFVSKSKRDPDQQHQIGFFRFPKCPETFKLWLAFCGFTEVSLKWKNPCICIEHFKDEDIEGSLKFEMGLAKKRTLRPGAVPCINKNQESPSERARKERTQRRRNQKLVSELLAEDDSKSNALAPSTVVCPEQDNMDLAEAVAMDQMEKRERCRICYQDFVVDNRAKDLFDQANSILLFHIEVISGVWISHKPAEPQLMCPACVLSLDQAIDFREMCISTELRISQSNPLNKMEPSKIELKDLNEESSTSDPELGSDSDFTNLEEIEEVAEDEECAEDEANLNDQLSQEPSIEPDEPTSQDPLSVALGAKIFKELIDQYTGHERTKLKKEETVPKKTRSRQTAVCEQKPKRRANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCSECPKTFYDAYMRNIHIRIRHRGESPFACRFCSETFAYAGARQKHESEVHNAAPRLIVKRINPKPMAKPRDDVRYQCKLCHKHYASKYALGWHIKSHTDANAFKCKQCSKSYSDPNKLKRHEMTHEKRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNAHFRYKYNLKTHANSKMHQENVRKTGGVLIHEAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00602872;
90% Identity
iTF_00588386;
80% Identity
iTF_00512239;