Basic Information

Gene Symbol
crm
Assembly
GCA_018153365.1
Location
JAECXW010000062.1:16791781-16795498[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-08 8e-05 22.7 0.0 2 44 98 153 97 155 0.93
2 2 0.9 9e+02 0.1 0.1 9 25 277 293 276 298 0.91

Sequence Information

Coding Sequence
ATGGAGGACCTGTGCAAGCCACCGTTAGCCGTGTCCATCGAGGAGCCCTTGCCAAACGCAAATGGCAAGGGTGTAGTGCACTTGAAGACCACTCTGCCCGAGGAGGAGCTCCTCGGCTCGGTGACCACGCACAATTGCCCGGGAACGCGGGCCAGTGCCCGGGTCATCCAGAAGATGAAACAGGATCAGACTCGACCGATGACACCGCCCCCCAGCGAGCGGGAGGTGAGCAAAAAGGAAGAGAAGGCCGCCCAGAAGACGCCCAGCCAGTTGAAACCGGGCAGTGGGAAGACCACCTGGACGAATGTGGAGCGCAATTGCTTCTTCGACGCCCTCAATGAGTTTGGCAAGGACTTCGAGGCAGTGGCCAACTGCATCAATGCCAAACTGAAGCGGCGCAACGCCAGCAGCGACTATAGCTTCAAGACGAAAGATCAAGTGCGCCAGCACTACTACCAGACCTATCACAAGATCTGCAAGTACGTGCGCTACTCGGAAGAATTGAAAAAGCCCGCCCAGGAGTTGTACACTCTGATTAACTACGGCGAGATGCGGCGCAAGCTGCAGTTTCTCACGGAGAAGCACTTTATGAAGCTGAAGCAACTGGTTTACCAGGGACAGATCACTGTGCGCTGCAAAGGCAAGAACATCCGCATCAAGACGCCATCGTGCAAGGCGCTCCGACGACTCAATCAACTGGATGATTCCCTTGAGGACATCCGTCTGCCCAGCAAGGTGGAGCTGCTGGTGACGCCCGCCAATATGGAGGCCTTCGGCCGGGTGCAATCCCTGGCCCAGAATCCGCGCGGCAGGATCATAGTTCCGCTACACAAAAAGCTAATCAGTCTCATCAAGACGTTCGAGTACAAATGGCGGAGTGCAAATCAGCGTCTGCACGAAGAGAAGTCCGTCTTCTTATCCACCAGCATCGCATCCACTGCTTCCACCATTGCAACCACCAACAACAACAACAATGAACCAGAGCCACTGCAGCCGGCTCCGTCATCACTGGATCCCTCACTGTGCTTCCAACCCAGGCCGGGAGTGGCCATCCACCGACCTTTGCTTAGCATCACCGCCTATTTAAGCAGCATTAATATCTGCCTGACCGCCTACGAGGAGCGCATGGGTTTCAAAGTGCGCAGCGAGACGTTGGGCAACCTGCCCGGCATTACGGTGGCGGCTAGCAAGAGACCCCGAACGGAAAGCGGGTCGGAGAAGCGTTCGCCGGAGTCCAAGAAACTAAAATCGGGTGCTAGTCCGCCACTGGAAAAGAGTTTGTATGATGTGCCCCTGGAGGGGAATCTAGTTAAGCTGGAGAATAGCAGCGGCGATGAGCTGGGCGAAGAGATTCAGGACTTCCTTGTTGACATAGTGGAGGCCACGGTTCAAACGCAGGGAGCCACGATTTCAGCTCTTTCAACCACACCTGATGAACAGCAACCGGCCCTTGCTGTTGTTCCCGAAACTGCCACAGATCCAGCTCCTCCAGTCACCACCGAGCAATCTACTTCCTTGGGAACCTCGTCTCTTTTAGCTCCTGCTGTCGCTCCTTCGGCTACTCTGGCACCTTCTACATCTGCAGCTGGTCCTTTAGTGGCTCCTCCGGCAGCTCGCTCCAAACGCAAGGAAGCCAAAGAGGCGGCAACGGCCCGAAATTTTAAGCCCCTGCTCAGCGACGAGATTCTCAAGCGAATCCGCAAGGGATGGACGGAGGCCAATGCGGCGGATATAACCATTGGCGATCTGTATGTGGTTTTTGGCCAGGATTCCAAGCTGGAGCTGGAGTATTACTGGTGTGAGACGGAGAGCTCGATGGCCATGGCACCCAGCACTTCATGCAGCAACTCAGTGGCAGCCGGCTCCTCGTCTGTGGCCACTCAAACAGGCACCTCCACCTCCACCGCCAGCCAAACAATCGTATCTTCCAACTCCTCCGTCGTCACCTCGACCACTTCGCTGCCCTACAATCCCAACGACTGTGATAGCGTGGAACGCGTCAAGGCCGTCACCACATCGTCGGTGAGCAACAAGCTGAAGCACCTGCTGCTGGTGGCCAATCTCAGCGAGCGTGTACGCAAGCGCCAGTGCACTTGCGGCCACACCTGCGACCGCAAGCGTGATCTGATGAGCAAGGCGCAGCAGCTGGCGGAGGCGGCGGCCGCCGGCGGAGCAGGCGTGGTGGAGGGCAACTTCCGCACCCCGATGCTGCCGGTGAGGCGACCGATATCCAACATCATCGATCCCGTGCGCCAGCTTTCAGCGCTCACTCGACAAAAGATGAGTCGCCAGGTGCTCGTGCAGCGTCGTCTTCTGCCCCCCGCCTCCATTGGCGGTCGTCCGTACGATCTGCTGAGTGTGCGCCAACTCCACAGTGGCCTCTTCGAACCAATCGATCGCCTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGACGATGCAGTTCTTCGACGAGGGAACCGCCCAGGGCGCCGCACGAGATATGCCCAATCTGGACATCTGTGTGGCCACCAGCACCACCGGCGTCAGCAGTGTCCTGACCGAGGCGGTCCAGGATGAGAGCACAACACAAAATTTCTTCCATGGCAGCGTAAGCCCGATGCACTTGCTTAAGGACTCGACTTCCAATGCGCGCTGGCTGGAGGATAATATCAATGATTTCTCGCTGACATCGCTGCTGGGGCATTTGGACGAGATTGATGCCACCAGGGATATACTGGATCCCTCGTCGAGCATGTCGGTGATTAGCGAGAGCAGCGTGGACTTCCGGCACAAGTTCCAGGAGATCGCCGCCCTGCTGCAGCAGCAAGAGAAGGATTAG
Protein Sequence
MEDLCKPPLAVSIEEPLPNANGKGVVHLKTTLPEEELLGSVTTHNCPGTRASARVIQKMKQDQTRPMTPPPSEREVSKKEEKAAQKTPSQLKPGSGKTTWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNASSDYSFKTKDQVRQHYYQTYHKICKYVRYSEELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLVYQGQITVRCKGKNIRIKTPSCKALRRLNQLDDSLEDIRLPSKVELLVTPANMEAFGRVQSLAQNPRGRIIVPLHKKLISLIKTFEYKWRSANQRLHEEKSVFLSTSIASTASTIATTNNNNNEPEPLQPAPSSLDPSLCFQPRPGVAIHRPLLSITAYLSSINICLTAYEERMGFKVRSETLGNLPGITVAASKRPRTESGSEKRSPESKKLKSGASPPLEKSLYDVPLEGNLVKLENSSGDELGEEIQDFLVDIVEATVQTQGATISALSTTPDEQQPALAVVPETATDPAPPVTTEQSTSLGTSSLLAPAVAPSATLAPSTSAAGPLVAPPAARSKRKEAKEAATARNFKPLLSDEILKRIRKGWTEANAADITIGDLYVVFGQDSKLELEYYWCETESSMAMAPSTSCSNSVAAGSSSVATQTGTSTSTASQTIVSSNSSVVTSTTSLPYNPNDCDSVERVKAVTTSSVSNKLKHLLLVANLSERVRKRQCTCGHTCDRKRDLMSKAQQLAEAAAAGGAGVVEGNFRTPMLPVRRPISNIIDPVRQLSALTRQKMSRQVLVQRRLLPPASIGGRPYDLLSVRQLHSGLFEPIDRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTMQFFDEGTAQGAARDMPNLDICVATSTTGVSSVLTEAVQDESTTQNFFHGSVSPMHLLKDSTSNARWLEDNINDFSLTSLLGHLDEIDATRDILDPSSSMSVISESSVDFRHKFQEIAALLQQQEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605513;
90% Identity
iTF_00588077;
80% Identity
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