Basic Information

Insect: Drosophila fungiperda
Gene Symbol: -
Assembly: GCA_035042345.1
Location: JAWNLM010000093.1:1401478-1415627[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.6 1.8e+02 2.8 2.3 3 23 295 317 293 317 0.92

2 13 0.96 66 4.2 0.7 3 21 459 477 457 481 0.92

3 13 0.079 5.5 7.6 0.8 1 23 542 565 542 565 0.95

4 13 0.13 9.1 6.9 0.3 1 21 570 590 570 594 0.91

5 13 0.0079 0.55 10.7 0.1 2 23 654 676 653 676 0.94

6 13 0.66 45 4.7 0.2 1 21 681 701 681 701 0.92

7 13 0.006 0.41 11.1 2.1 2 23 769 789 768 789 0.96

8 13 9.1e-05 0.0062 16.9 0.9 1 23 795 818 795 818 0.96

9 13 0.00027 0.019 15.3 0.4 1 23 845 867 845 867 0.98

10 13 1.1 78 4.0 0.4 1 23 874 898 874 898 0.95

11 13 0.48 33 5.1 5.9 1 23 903 927 903 927 0.97

12 13 0.0047 0.32 11.5 2.4 1 23 940 962 940 962 0.98

13 13 0.0012 0.082 13.3 3.4 1 20 968 987 968 989 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.6	1.8e+02	2.8	2.3	3	23	295	317	293	317	0.92
2	13	0.96	66	4.2	0.7	3	21	459	477	457	481	0.92
3	13	0.079	5.5	7.6	0.8	1	23	542	565	542	565	0.95
4	13	0.13	9.1	6.9	0.3	1	21	570	590	570	594	0.91
5	13	0.0079	0.55	10.7	0.1	2	23	654	676	653	676	0.94
6	13	0.66	45	4.7	0.2	1	21	681	701	681	701	0.92
7	13	0.006	0.41	11.1	2.1	2	23	769	789	768	789	0.96
8	13	9.1e-05	0.0062	16.9	0.9	1	23	795	818	795	818	0.96
9	13	0.00027	0.019	15.3	0.4	1	23	845	867	845	867	0.98
10	13	1.1	78	4.0	0.4	1	23	874	898	874	898	0.95
11	13	0.48	33	5.1	5.9	1	23	903	927	903	927	0.97
12	13	0.0047	0.32	11.5	2.4	1	23	940	962	940	962	0.98
13	13	0.0012	0.082	13.3	3.4	1	20	968	987	968	989	0.95

Sequence Information

Coding Sequence: ATGAACGCGGAGTCGTCAGATTTGGAGGACACCCATTTGTGCATCAAATGCAATGCGACAATTGTGGGTCTAAGCAAGTACATTGAGCATCGCAAGAGGAATTGCCTCAGCACTGGACGCAATGAGCACCTGACGAAGCAGGTGGTGACTCCGACAACGACGTCGACGCCCACCCAACAAGTTGCTCAGGAAATCATGCGCCGCACCAACTTGGATCACACCTATGAGGGCTTCCACTTTGCGGAGCCGGAGGCACCCAGCAGTTATCTGCGCAAGACGGCCTCCAGTCATGGCGGAAAGACGTCCAAGTCCCTAACGGACTCCTATTATCAGACGTACGAGCTGGGCGCCGATCTGTTCTTCTCatcgctgcagctgcagagTGTCTCAACTGGCGGCAAGACAGTTGCACGGCCGGAGCGAGGCGCCAAGGAGGAGCAGAGCTGGCATACATCCAGCAGCTGCTCCGATCCGCTGCTGAAAGCGGTGCGGGAACACGAGGTGACCCACTATAAGTCACTGAAATTTGTGCACTCGCCAGAGCCAAGCGAGGAGGAGGAATACGACGAGGACTTCGagggtgatgatgatgagcatGATCCCGATCCCGATCATGATGAGGATTACGATGGGCGTCGCCATTCGCCGCCAACGGTGCCTGCCACGCACACGGGTGGCAAATGGAAGCCGGAGCATCGTCCCCAACTGCAACACACGCATCTGGAACGCATCTCGCCCAGCTGGGATGAGCAGCCCGAGGAGCAGCACGATCATCCGCCGGTGGAGCACACGCACGGCAAATGGGTGCCTGGCAGCAAGCAGCTGGAGTATCGCGAGAACATCGATCTGACCAAGTTGCAACAGCCAGGCGCCAGCTACTGGTGCAACATCTGCTGCCGCCGCCTCAAGACGCGCCTCAACTACGAGCAACATCTGCGCAGCGCCTACCATCAGCGGCGCGCCGATGCCGAGCGTCAACTGGAGCAGGCCAAACTGGCCAGCGCCAATCTAACACTCACCACCAAGGACTTCCCACAGACGACGCCGCCCTCGGAGCAGCTGCCTCggcgtcgccgtcgtcgtgcCCATTTCCTGCGCTGCGATCTCTGCCGGCACAGCATGCCCCGTTATCTGATGGGCAAGCATCTCATCTCCCACTACCACTATCGCcgtctgcagcagcagcagccgagcCAGCAGCGCCGCCAGAACTCGCTGCAGGACATCCTGGAGCACATGGGCAGCATTGTGAGACAGGCGCCATTCCAGTGCCTTCCCTGTCGCTTCTATGCCAACACTGAGCAATCTTTTCAGCTGCATTGGCGCTCCTTGACGCATGTGAAGCTGACGGAGCGACTTGGTGGCAGCTTCTGGTGCAGCTACTGTCAGTTCGAGTGTGCCAGCAATGAGGAGAtgtggcaacatttgctgGGCTCCTCGCACATGGAGGTGCTCTTTGCGATCAATCGTTCGGTGCCCGTTTGCATTGCCCAGCGTCGTCCAGTGAGCTGTTCCAGCTGCAGCGACACCTTCCTGTACAATGCGCAACTGCGTCGGCACTTCGCCGCGGAGCATGTGGGATTGGTGGCAACGGGCAGTGCTGCCGATGACTATCAGTGTCGCTATCGCTGCGGGATGTGTGGCGTTGCACAGAGATCTCGAGTGGCGTTGCAGCGGCACGAGAAGCACAAGCATCGATTGGCCAAATACTATTGTGCCGTTTGCCGGATGGAGTTCAAGACGCCGCTGGAGGCGCGACGCCATCGCAGCCTGGTGCAGCACAAGCGGCGAGCTTGCCGGCAACTGAGCCGCAAacgcagcaggaacagcaacagcagtaatCAGCCGGATCGCGAGATTCAACACATGCTGCACGAGGTGCTGGAGGTGgtgcagcagccagcagcagctggagaacAGTCAGCAGAACTGAATTCCAAGAGGCGTCGCCTGGCCAGCCAGTGTGTCAGCTGTCCGCTCAGCTTTGAGACGCCTCAGGCACTCGTCGCACATCGTCGCGACTCGCATCCCATGGACAATCATGCCTGTctcagctgtggcagcagcttcCAGTCCGCCCAGGCTCTGGGCAGACACACACGCTGCTGCCAGCCCACAGCGTCCACCTcgtcagctgctgctccagctccagctccagctacaGCTTCATCTCCAGCTGCATCAGCTCAATCGAAGTGCTGGAATTGTGCCCAGTGCAGTTTCACTGCTCAATATGAATCGGATTTGCTGTATCATCGTTTCTACCACACCCACGGCTCGGCCATTGGCAAGAATGAGCTACTCCAGTGTCCGCTGTGCCCCAAACAGTTCCGCAAGCACTCATTGCGTCCCCATCTGCGCAATCACACGGACGAAAGGATCTTCGAGTGCGTCGAGTGCTCGGCCAAGTTTGCCCGGAGACACAACCTAAAGAATCACATTGCCATAAAACATGGCCAAAAGGAGAAATCCTCACCAGCTGCTGCTAAGTCAAAATTGGAACAACAATCGAAGAATGTTGCCAAGCAGAAATATCAATGTGGCACCTGTGGCAAAATACTGGCTAAAAAATACTCACTCAAACTGCACGAAATGAGCCACGCTGAATTGGAGCGTCGGCATCGTTGCCACATTGAGGATTGCCAATATGCTGGTCTCACGCCGGAGGCACTCAAAATCCACCTAATCTCACATGCAAAAGGAACTCACAAATGTGAACACGACAATTGCCAATATGTGGGCAAAAGTGAGCTGCACTTGAAGCGgCACCTCAAGTCGCATGTGCCCGAAAAGGAGCTGGTCGAGGTTGGAAAATGGTTTCCGTGCGATCGGTGCGAGTTCAGGGCCCGCATCAGGGGACATCTGAGGCGGCACATGCGTCGCCACACTGGCGAGAAACCCCATCAGTGTCCGCACTGTGACTTTCAGTGCAGCAGCATGGATAATCTGCGCAAGCATATCGTCAAAACGGGCAAACATCCTGGCAAGTTCATCTACGAGTGTTCGTCCTGCGACGCCTTCAAGAGCAACAGCTTCAAGGATCATCAACTACATTTGGCCACGCATAAAAAAGAGATTACCAAATGA
Protein Sequence: MNAESSDLEDTHLCIKCNATIVGLSKYIEHRKRNCLSTGRNEHLTKQVVTPTTTSTPTQQVAQEIMRRTNLDHTYEGFHFAEPEAPSSYLRKTASSHGGKTSKSLTDSYYQTYELGADLFFSSLQLQSVSTGGKTVARPERGAKEEQSWHTSSSCSDPLLKAVREHEVTHYKSLKFVHSPEPSEEEEYDEDFEGDDDEHDPDPDHDEDYDGRRHSPPTVPATHTGGKWKPEHRPQLQHTHLERISPSWDEQPEEQHDHPPVEHTHGKWVPGSKQLEYRENIDLTKLQQPGASYWCNICCRRLKTRLNYEQHLRSAYHQRRADAERQLEQAKLASANLTLTTKDFPQTTPPSEQLPRRRRRRAHFLRCDLCRHSMPRYLMGKHLISHYHYRRLQQQQPSQQRRQNSLQDILEHMGSIVRQAPFQCLPCRFYANTEQSFQLHWRSLTHVKLTERLGGSFWCSYCQFECASNEEMWQHLLGSSHMEVLFAINRSVPVCIAQRRPVSCSSCSDTFLYNAQLRRHFAAEHVGLVATGSAADDYQCRYRCGMCGVAQRSRVALQRHEKHKHRLAKYYCAVCRMEFKTPLEARRHRSLVQHKRRACRQLSRKRSRNSNSSNQPDREIQHMLHEVLEVVQQPAAAGEQSAELNSKRRRLASQCVSCPLSFETPQALVAHRRDSHPMDNHACLSCGSSFQSAQALGRHTRCCQPTASTSSAAAPAPAPATASSPAASAQSKCWNCAQCSFTAQYESDLLYHRFYHTHGSAIGKNELLQCPLCPKQFRKHSLRPHLRNHTDERIFECVECSAKFARRHNLKNHIAIKHGQKEKSSPAAAKSKLEQQSKNVAKQKYQCGTCGKILAKKYSLKLHEMSHAELERRHRCHIEDCQYAGLTPEALKIHLISHAKGTHKCEHDNCQYVGKSELHLKRHLKSHVPEKELVEVGKWFPCDRCEFRARIRGHLRRHMRRHTGEKPHQCPHCDFQCSSMDNLRKHIVKTGKHPGKFIYECSSCDAFKSNSFKDHQLHLATHKKEITK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00528388;
90% Identity: iTF_00535679;
80% Identity: -