Basic Information

Gene Symbol
Hr38
Assembly
GCA_035042345.1
Location
JAWNLM010000093.1:4479042-4482970[-]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.0041 35 3.8 0.4 15 87 46 173 38 178 0.64
2 3 0.34 2.9e+03 -2.5 2.3 218 244 207 233 193 240 0.76
3 3 6.9e-39 5.9e-35 121.2 0.0 1 268 599 865 599 869 0.88

Sequence Information

Coding Sequence
ATGTTACTCTTGCAACCCAATAGCTCCTTTAGTTCACTCTCGTCGTTTGACAATTTCTCAACGCAAAccgtgacaacaacaacagcgacgtcggcagcagcagcagcattagcagAGAGTAGTGCtggacatcatcatcataatcaccgacatcatcatcagcaccagaatcagcatcagcaaacCCTGCAATCCCATCAACAACACAATCAACACTTGCTGCTGCCCGCATCCAGTCAGGACACATTGCTCTCCCATGAGGAGGATCAGCTGATAAGCAATCTGGCCGATGCAGCCGTCACGCACAGTGAACTCTTCTCCGATTTATTTTTCCCCTCGGACTCAAATAACTCCCTGCTCTCCCCGGTACTGGAGCACCACTCGGTCGCAAGCTATCCTGATACACAGGTGGATGTGCCGCCGCCCTCCTCCCATGAGACATTGATTGGCAGCAGCGAGGACATCACTAGCTCCATTGAGAATCTCACCAAGCTGACGTGCCTGCGCGACAAGCGCCTCTCCTCCATCCAGGATCAGCCTGCTGGCAGCTCCGACCAGGACCATCATTCGATCTGTCTGCTCAGTCTCCGCTCCAGCAGTGATCCCGCTATTGCCCTACAcgcccagcaacaacaacaactacagcaacaacaacaacatctgcaGGCAGTCCATCAgttgcagcggcagcgacacGGTGCCAGCGATTTACTGATCTCACCAATTGGGGGGCCGCTCTCGTGCGGCAGCAGCCTTCCCAGTTTCCAGGAGACCTATTCCCTCAAatacaccagcagcagcggcagcagtccTACTCCCTCCACTGCTACACCCTCCGATCAGTTGCTAACCCTCAAAATGGATGATGATTGCTTTCCGCTGACCAACACCGCTGCAGAAGTGATGGCGGGTCTCAGTTCAGGTCCTTCCTCCGGACAGCTGCAATCGCTGCATCAATTGCATCGAGCTCAACCCACACACCTCTCACATtccggcaacaacaataccaataacaacaacaacaacgcaaacaacaacagcagcagcagtggcagttaCAACTATCATGGTCATTTCAATGCCATCAATGGGGCTTCCAAGTTCTCTCCAAGCTCTTCAGCCAGCTCACTCTATGAGTACAGTGGCCAGAATGATCTGTTCtatggccaacagcaacagcaacaacatggcTATCAGCAACATAACTACAACACCCATAACGGCGAGCGTTTCTCTCTGCCAACATTTTCCACCATATCAGAGCTGGAGgcagcaaatgctgctgccgccgatGCCAATGCTGGTCCCACCTCCGGCTCCAACTCGGTCGTCGCCGTCCCTATGCCGCCCATGCGACGAGCCTCGTTGCCCGTGCAACGTTCCGTTTcgcccgctgctgctgcacacagTCCCAAACTGGCCAAGTTGACTCTTGGTCCGCGACATGCTCATGCTCATGCCCTGCAGGTGCAGTTGAGTTCCACGCCCAATTCAGCGGCCAGTTCACCAGTGAGTGGAGCTGGTACGGATCTCCTACACAGCCAGGCGAGCAGAATGCTGCAGTCTGCGAGCTCCTCGCAGTTGTGCGCAGTGTGCGGAGATACCGCCGCCTGTCAGCACTATGGTGTGCGCACCTGTGAGGGTTGCAAGGGATTCTTCAAGAGAACCGTTCAGAAGGGTTCCAAATATGTGTGCCTGGCGGACAAAAGCTGTCCGGTTGATAAGCGGCGACGCAATCGCTGTCAGTTCTGTCGCTTTCAAAAGTGTTTGGTTGTGGGCATGGTCAAGGAGGTGGTGCGCACGGATTCCCTGAAGGGTCGCCGCGGGCGATTACCGTCGAAGCCAAAGTCGCCGCAGGAGTCGCCACCATCGCCGCCCATATCGCTGATAACGGCACTGGTGCGCAGTCATGTGGATACAACACCGGATCCCTCGTGCCTCGACTACACACACTACGAGGAGCCACTCGACCCGCTCACGCCACCAATTGTGGCCAGTGCACTGGGCATGAGTGAGGCTGACAAGGTGCATCAGTTCTATCATTTGCTCACCAGTTCGGTGGATGTGATTAAACAGTTTGCTGAGAAGATACCTGGCTATCTGGATCTCACGCCGGAGGATCAGGAACTGCTCTTTCAATCCGCCTCGCTGGAACTGTTCGTCTTGCGCCTGTCCTATCGGGCCCGCAGCGATGAAACCAAAATGATATTCTGCAATGGCACAGTTCTTCATCGGAATCAATGCCAGAGATCTTTTGGCGATTGGTTGAATGGCATCATGGAGTTTAGTCGCAGCCTAAAAAATCTCGAGATTGACATATCGGCATTTGCCTGCCTCTGTGCACTAACACTGATAACAGAGCGTCATGGGTTGCGTGAGCCCAAGAAAGTGGAGCAGTTGCAAATGAAGATCATTGGCAGTCTGCGTGATCATGTCACCTACAATGCGGAGGCCCAAAAGAAGCAACATTATTTCAGTCGTCTCCTGGGCAAATTACCCGAATTACGCTCTTTGAGCGTGCAGGGACTACAACggattttctatttaaaactGGAGGATCTGGTGCCGGCACCAGCATTAATTGAGAACATGTTCGTCACCACGTTGCCCTTTTAG
Protein Sequence
MLLLQPNSSFSSLSSFDNFSTQTVTTTTATSAAAAALAESSAGHHHHNHRHHHQHQNQHQQTLQSHQQHNQHLLLPASSQDTLLSHEEDQLISNLADAAVTHSELFSDLFFPSDSNNSLLSPVLEHHSVASYPDTQVDVPPPSSHETLIGSSEDITSSIENLTKLTCLRDKRLSSIQDQPAGSSDQDHHSICLLSLRSSSDPAIALHAQQQQQLQQQQQHLQAVHQLQRQRHGASDLLISPIGGPLSCGSSLPSFQETYSLKYTSSSGSSPTPSTATPSDQLLTLKMDDDCFPLTNTAAEVMAGLSSGPSSGQLQSLHQLHRAQPTHLSHSGNNNTNNNNNNANNNSSSSGSYNYHGHFNAINGASKFSPSSSASSLYEYSGQNDLFYGQQQQQQHGYQQHNYNTHNGERFSLPTFSTISELEAANAAAADANAGPTSGSNSVVAVPMPPMRRASLPVQRSVSPAAAAHSPKLAKLTLGPRHAHAHALQVQLSSTPNSAASSPVSGAGTDLLHSQASRMLQSASSSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPDPSCLDYTHYEEPLDPLTPPIVASALGMSEADKVHQFYHLLTSSVDVIKQFAEKIPGYLDLTPEDQELLFQSASLELFVLRLSYRARSDETKMIFCNGTVLHRNQCQRSFGDWLNGIMEFSRSLKNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01326417;
90% Identity
iTF_00498196;
80% Identity
iTF_00511298; iTF_00511322;