Basic Information

Gene Symbol
grh
Assembly
GCA_035042345.1
Location
JAWNLM010000102.1:885587-915997[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 1.7e+04 -5.8 7.9 85 111 251 277 203 326 0.60
2 3 3 1.7e+04 -6.8 4.3 13 20 554 561 536 580 0.43
3 3 4.2e-63 2.4e-59 200.3 0.5 24 221 696 888 682 890 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCACGGCGCTATAGCTTGGAGGCTGCACAGCATGCAACGCCGCCCCCGCCATCAGCAacaccacagcaacagcagcagcagccgcaacagcagcagcagcagcatcagcaacttcatcttcagcaacagcagcatccacatccacatccgcaaCCACATCATCAGCTTCAAGCACACCATCttaatcatcatcaacaacatcatcagcattaTGCGAGTCAATCGCCACCGCATTACTCATATGTGGTGCCGCCCAAGGATGCAGCAGCTcagttgcaactgcatctGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAACTAAGCGAACAGCAATCGACACAGCCGCCAGCAGCACCGCccccaccaccgccgccgccgctgccaccAACAGCACACGCCTCCAACTCCAGCTATGCGGTTTACAGCTACTACCGAGATGGCGATGTGGATGTCGATGTGGAtgtcgagcagcagcagcagcatcagcagcaacacaatTCTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATGCGAGCAGCACCGGCAAACTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTTTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacagcaacatcagcagcaacagcagcatcaacagcagcagcagcagcaacaacagcaacaacaaccgccaCATCCCAGCGACATTGTGACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCCgcagtgcaacagcagcaacagcaacagcagcagcagcaacaattgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGTGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacaacaacaacaacaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTCGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACAAGATTGCCACCAGGCCCACCGCCCGCCACCACATTCATAACGGAACCCTATTACCGGGAATACTTTGCGTCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCACGCAGCCTCTACGGCGAGGATGTATCCGTGGCTGCGGCCACACAACCACAGCCCGTGGGCGGTGTTTACGAAGCGCGATTCACCAGCAATGGCCCAACCACAACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcagcagcaacagcagcagcagcaacagcaaccgcagcaacagcaaccgcagcatcagcagcaggaacaaTCGGTCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACCGCGGCGGGTCTCACCGTCGATTTGCCAAGTCCCGATTCAGGCATAGGAACGGATGCAATTACGCCGCGGGATCAAAATCACATACAGCagtCCTTCGACTACACGGAACTTTGTCAGCCGGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTCAACAGCATCCAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGCTCGACACGCTCGAGGCCTTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatcTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCCATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAATATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATCGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTCAAAGGTCTGCCGTTGCACGTGCAAATCGATACGTTTGAGGATCCGCGGGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGATGAGGAGCGTCGCGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTACTCTTCTCGCCCGCCGAGGATATGGAAAAGGATGATCGACCTTGGCCGGATTTTGACAACAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCATTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCACCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGGCCTCCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCACTTCATGTGGTGCCCCCGACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatcgCACAAATAAGAAGGGAATTACGGCGAAAATTGATGATGATATGATTTCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTCCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACCGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRYSLEAAQHATPPPPSATPQQQQQQPQQQQQQHQQLHLQQQQHPHPHPQPHHQLQAHHLNHHQQHHQHYASQSPPHYSYVVPPKDAAAQLQLHLPLTAAGLMQSVADEIQLSEQQSTQPPAAPPPPPPPPLPPTAHASNSSYAVYSYYRDGDVDVDVDVEQQQQHQQQHNSRSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQQHQQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATAFEISDKTAAAATTTTTTTTTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFASDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQPQQQQPQHQQQEQSVKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKDDRPWPDFDNSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
-