Basic Information

Insect: Drosophila funebris
Gene Symbol: erm
Assembly: GCA_018901825.1
Location: JAEIFK010000425.1:26729552-26733071[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.5e-05 0.001 19.3 0.8 1 20 332 351 332 354 0.93

2 6 7.9e-07 5.3e-05 23.3 1.6 1 23 360 382 360 382 0.97

3 6 6.2e-07 4.2e-05 23.7 2.5 1 23 388 410 388 410 0.98

4 6 7.3e-06 0.0005 20.3 3.2 1 23 416 438 416 438 0.98

5 6 0.00088 0.06 13.7 6.0 1 23 444 466 444 466 0.99

6 6 1.4e-05 0.00096 19.4 4.3 1 23 472 495 472 495 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.5e-05	0.001	19.3	0.8	1	20	332	351	332	354	0.93
2	6	7.9e-07	5.3e-05	23.3	1.6	1	23	360	382	360	382	0.97
3	6	6.2e-07	4.2e-05	23.7	2.5	1	23	388	410	388	410	0.98
4	6	7.3e-06	0.0005	20.3	3.2	1	23	416	438	416	438	0.98
5	6	0.00088	0.06	13.7	6.0	1	23	444	466	444	466	0.99
6	6	1.4e-05	0.00096	19.4	4.3	1	23	472	495	472	495	0.98

Sequence Information

Coding Sequence: ATGGTTTACTTTAGTCCGCGTGGCATGCAACCGTGTAGTCCATCGGGTGTAATTGCAATGATGCCGCCATCGAAGAGTCCCATCATGGAAACCGCCGCCAGCGATAGCAATCAAACAAACAGCACAGGCAGTAGCGATACTAAACGCTCCTGCCCCTTGAAGTTCTCCATTGCCAAGATCATGGAACCAGACACGAAGCCTACAACCCACGCTGTGCAAGCACCTCAGCTGCCTCAACAGTTGGAGGAGCAGCAATTGCAGGAGGAGGATCATCATTATGCTGACTCAGAGCGTTCTTGCAGCCCCATTGAGGTGACTGGCGATGATGAGGAACCTGCCACCATTGCTGCCGTCAATTATGACTCCGCATTTAAAAAATATGTGCCAGTATCCAGCTCCAGCTCCAGCTTGGTCTCTGCATCCGCCTCGGCCTCGGCCACCGTTTCCGCTTCCGCTTCGGCTGTGCAACAATTTGTGAGTACGCGGCATCAGGAGCTGCTCTCCCAGTATCCCTTGCTCTACTATGCACCTAATCAACTGATGTGTGCCGCAGCTGCCGCACAATATGCTGCGCTGACAGCTCAACAACAGACGTTGGCGAGTGCCGCGCATTTGAGCAGCTTTACAGCCTCGTTGAATGCCACATTGCATCATTCCCAGTCGCTGCGTCGCAACTTGGGGCATCCATTGGCCGCCGCCGCCGCAGCAGCTGCAGTTGCGCAATCTCAGCAACCTCCTACCTTGCAGCAGAATCTGGAGAAGTCTCCCGCTCGCATTCCACACTCCTCCTCTCAGCATGCGAATCTCAAGCGAAAACGTTCACCGCAAGAAGAACTAAGAACTCCGCCGTTGCCATTGCCATTGCCATTGCCACTTCCTCAAGTTGTCCCCACATCTTCTCATCTGTCTGCGCCGCGTTCCCGCTCGCCGTCGCCACATGGTTCAATTGAGGACAGCAGCCCGGGCTCAGCAAATGGTGGCAAGCCGAAGACTTTCTCCTGCTTGGAATGTGGCAAGGTCTTCAATGCTCATTACAATCTCACACGACACATGCCCGTCCATACGGGTGCACGTCCATTTGTGTGCAAGGTGTGTGGCAAGGGATTCAGGCAGGCGTCGACTCTCTGCCGGCACAAGATCATCCACACCTCTGAGAAGCCGCACAAGTGTCAGACCTGCGGCAAAGCCTTCAATCGCAGCTCGACGCTGAACACCCATGCGAGGATTCATGCCGGGTATAAGCCTTTTGTGTGTGAGTATTGTGGCAAGGGATTCCATCAGAAGGGCAACTATAAGAACCACAAGTTGACGCACAGTGGAGAGAAGGCCTACAAGTGCAACATCTGCAACAAGGCCTTCCATCAGATCTACAATCTCACCTTCCACATGCACACACACAACGACAAAAAGCCGTATACATGTCGTGTCTGCGCCAAGGGATTCTGCCGTAACTTTGACCTGAAGAAGCACATGAGGAAGCTTCATGAAATTGGAGGCGATGGCTTGGATGATGATCTCCCACCTGCCTATGAGCGACGAAGGGAGTACACCAGAAGGGAGCCACTGTCCAACTACAGTCAGACCAGTCAGTTGACGCCCGACAGCTCCTCGGGCAGCCTCTCACCCCCGATCAATGTGACCACGCCTCCTTTGTCTAGCGGAGATGCCAGCAATCCGGCCTGGACACGCACCCCTTACCAGGAGACAACTGCTGCTCCAACTGGACATTTCCATCATCATCTGCCGGTGCCGCCGGCAGGATTGCATGGCGAATATCCAGGAAATTCTCCGTTCCTGCAACTGCCACATACCGTCCAGCAGCAGCATCAACAGCAACAACGTCTATCTGCAGCTGCCCTGGAGAATGTACCCTTTATTGCCAAAGTATTTTGA
Protein Sequence: MVYFSPRGMQPCSPSGVIAMMPPSKSPIMETAASDSNQTNSTGSSDTKRSCPLKFSIAKIMEPDTKPTTHAVQAPQLPQQLEEQQLQEEDHHYADSERSCSPIEVTGDDEEPATIAAVNYDSAFKKYVPVSSSSSSLVSASASASATVSASASAVQQFVSTRHQELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQQTLASAAHLSSFTASLNATLHHSQSLRRNLGHPLAAAAAAAAVAQSQQPPTLQQNLEKSPARIPHSSSQHANLKRKRSPQEELRTPPLPLPLPLPLPQVVPTSSHLSAPRSRSPSPHGSIEDSSPGSANGGKPKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFNRSSTLNTHARIHAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCNICNKAFHQIYNLTFHMHTHNDKKPYTCRVCAKGFCRNFDLKKHMRKLHEIGGDGLDDDLPPAYERRREYTRREPLSNYSQTSQLTPDSSSGSLSPPINVTTPPLSSGDASNPAWTRTPYQETTAAPTGHFHHHLPVPPAGLHGEYPGNSPFLQLPHTVQQQHQQQQRLSAAALENVPFIAKVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00582443;
90% Identity: iTF_00537708; iTF_00558127; iTF_00608646; iTF_00583903;
80% Identity: -