Dfun003278.1
Basic Information
- Insect
- Drosophila funebris
- Gene Symbol
- bab2
- Assembly
- GCA_018901825.1
- Location
- JAEIFK010000682.1:4268170-4270393[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 4.7e-07 29.3 0.0 1 44 338 381 338 382 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGACCGACGCCTGTGGCCAGCAGCGAGGGGCAGACGTATTGTCTGCGCTGGAATAACCATCAGACGAATCTTGTGCAGATTCTGCATGCTCTGCATGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTTGATGATGAACAGTTTAAGGCACATCGCGTTGTCCTCGCCGCCAATTCGCCATACTTTCAGGCCATTTTGCAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGTGTGAAGGGATTCGAGATTGCCGCCCTGCTGCAATATATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCTTGCGCACCGCCAAGGTGCTGCAGGTCAAGGGTCTCTACGATAACCTCATGAAGTTCAATCACAAAGCAATCGCACCCACCTCCAGTTCTGGGGGCAAGCCACTTAATGGTGGATCCGATGGTGCCTATGGACAGCATAATTCCTCCTCCGTGATCTCAACATCCACCCATATTTCACCCAGTGCCGCCATCTCGAGCAGCTGCTCGCCGCCTCCGCCACCATTTGGTGCCTATCAGCCGCCATATACGAGTTTTCCCGCCTCCAGTGGCGTTTACGAGTCGGCGGCCGATATGAATCCGCTGAAACGCAAGAAGCTATCGGCCATCTCGAGCATGTTGCTCAACAACACACGGGACACGCCCATTTTACGCAATGTGCTTGCTCAAGCGAATCCGGCAGACTCATCACAGCCTAATCCTCTAATGCTGCCGGGTGTCAAGAACTCGGCAGAGAAGACACCAACCCATCAGCACCAGCATCAGCATCCTCATCAGCTGCAACTTGGCAGCGGCAGCGGCAGCGGAAGTGCAGCTGGCGCTGGCAGCCACAGTTTCAATGGCTCCGACTATGGCGGCGATAAGGAGCCGCTGTCGCCCCACACGGATCGTTCCTTTGATGAGGAGACTGGCGGCCAGGGCAGCGGCAAGAAGCCGGAATGGAAGCGTTACAAACAATACACCCGGGCGGACATGATGTGCGCCATCCAATGTGTCCGCGAGGGGATGAGCGCTCTCCAGGCAAGCCGGAAGTTCGGACTGCCCAGTCGTACGCTCTATGACAAGGTGCGCAAGCTGAACATCACCACGGGACGTGGCACACATCGCACCCCAAAGCGTAGTCCCCCTGGCGTTGGTGGCGTGGAATCTTCGGCAGCGTTCCCCTATTCCGCTGCAGCTGCGGCGGCTGCAGCTGCTCATAACTATGGACAGACGGAGCTGAAACATGACCCGAAGGAACATGGACACGGGCATGGGCATGGACAGGGATCGGGGCATGGTCATCATGGTCATGGCATGACGCCAACGATTCCACACTCGGCTGCCGCTCTGTTGGACCACGCCTTCCTGCAGCAGGCATTGGAGAATCGTGGCGGTGACATCGCTGGCCGAGAGGCGCTCCATGCCATGGCTTTGGCAGCCGCGGCTCATGCGGCAGCCAATCGCATGTCCAACAGTCCGCCGGGTTCCAATGGCCATCATGCAGCACGTTCGCCTGTCCATTATGGCGAGCAGGAGGCGGCGCTGGAGAAGCACGGCCAGGCGATGATTAAACGCGAGGCCGTTGAGGAGGAACGCGATGCGGACGATGAGGATGATCATGATCAAGTGGAGGATCTATCGTTGCAACGCAAAGAGCGTCCAGAGTCGCCCTACTCGCCACCTCCGCCACGTGCCGCATCTCCCATGGAAAGCGCCAGCGTCATCATGCACTCCTCCAACTCTACATCCGTCTCCACCAATGGCAAGGAATCGCACGAGCTGGAACCGGAGCCAGAGCCAGAGCAGGAGCAGGAGCAGGAGCATGAGCTGGATGACTACAATGAGGTAGCATCACCAGCTGCAGCTGCACTGGGACTGGGATTGGGGATGGGCATGAAGCGGGAGCTGCTTGGCAGCGATGAGGCGCAAGCCCGCACCGACTGA
- Protein Sequence
- MGGPTPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKVLQVKGLYDNLMKFNHKAIAPTSSSGGKPLNGGSDGAYGQHNSSSVISTSTHISPSAAISSSCSPPPPPFGAYQPPYTSFPASSGVYESAADMNPLKRKKLSAISSMLLNNTRDTPILRNVLAQANPADSSQPNPLMLPGVKNSAEKTPTHQHQHQHPHQLQLGSGSGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGQGSGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAHNYGQTELKHDPKEHGHGHGHGQGSGHGHHGHGMTPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSNSPPGSNGHHAARSPVHYGEQEAALEKHGQAMIKREAVEEERDADDEDDHDQVEDLSLQRKERPESPYSPPPPRAASPMESASVIMHSSNSTSVSTNGKESHELEPEPEPEQEQEQEHELDDYNEVASPAAAALGLGLGMGMKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550970;
- 90% Identity
- iTF_00510631;
- 80% Identity
- iTF_00510631;