Dfun006737.1
Basic Information
- Insect
- Drosophila funebris
- Gene Symbol
- -
- Assembly
- GCA_018901825.1
- Location
- JAEIFK010000271.1:1345559-1351854[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-09 6.1e-06 25.7 0.0 16 40 445 471 441 474 0.84 2 4 3.3e-14 6.8e-11 41.6 0.1 2 39 486 523 485 526 0.94 3 4 7.6e-18 1.6e-14 53.2 0.0 1 45 540 585 540 585 0.98 4 4 7.7e-20 1.6e-16 59.6 0.0 1 43 592 635 592 636 0.97
Sequence Information
- Coding Sequence
- ATGACACTCATTATAATGAACGGTCTGTTGCGCACCGCGGAACAATTGAAAATCAAAGGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAACAGGCGGTTGTTGGGAACATTGTGAATGCGAGCCTAGGACAAAATCAAACATCTATCGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCAGTCACAACTGGTGACGATTCCGATAGCGGTGATAATAAGCCGCAAAAGATTTGCAAGACAGAACAATCGGTGGCCTCGCCGGCATCCAATTCATCGTCCGCATCAAATAATGCCGCAGCAACTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGTCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATATCACATCATCATACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGATTGATCCAAGCCAAATAAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGTCACATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGCGTATGCGGCCCTGGCGCCGGTGGTGTTGGTGGTGGTGGTGGTGGAGGCGGTGGTGGCGGCATTGGTGGTGGTGGTGGTGCTAATGCTGGCGAGAAAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAACGTGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCATGGAACGAGGATGCCTTACAGAATGCGTTGGAGGCATTGCGATCGGGTCAAATATCGGCAAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGCAATACGTCTGTACAAAAAGCAAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAATTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGTTCACTCTATGGGCGCTTCAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTCTCGCTGATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGCATATCAGGACACGCCAGCGGATCGGCAGCACCACCGCCCACAGCTGGCACCAGCAAACGCAAGAAAGCCACCAAACAAAAGCGTTGAGTAAACGCCAATAA
- Protein Sequence
- MTLIIMNGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLGQNQTSIVSLQQTADGNYIPVTTGDDSDSGDNKPQKICKTEQSVASPASNSSSASNNAAATGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVSMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGGGGIGGGGGANAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSHIRTRQRIGSTTAHSWHQQTQESHQTKALSKRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -