Basic Information

Gene Symbol
GATA6
Assembly
GCA_035045555.1
Location
JAWNOX010000009.1:3983315-3986134[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.046 1.2e+02 2.4 2.6 4 33 464 491 463 494 0.89
2 2 1.4e-16 3.7e-13 48.8 6.5 1 34 517 549 517 551 0.97

Sequence Information

Coding Sequence
ATGGAAGCGCAGgcaacgcagcagcaacagcagcagcaacagcaacagcaacaacagcaacagcaacagcagcagcaacaagtgcTGAGcaaacaacagctgcaattgctggataaaatcaaaattgagtCCAGCAACGGGAACGATCCACAGGCCAACAGCGTGCTGGAGGATccacaggagcagcagcagcagccaccaaCAACTGTTGGCGTTCTTGTACAGGGCAGCAGTCAATCTAGTGAGTcagatgagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcaacagcagtatgTCGTAGCACCACGCTCGCAACAGCGACGCATTCTAACTACAGCAGGAACACTCGAGTTGAACGAGACGCGCGAGAGCGAACACAGTGctaacaatagcaacagcgcTAGCTCGGAGACTCACATTGAGTATCAGCGTGGAGCGCACCACTCACCACACTACATTCAAATGGCACCACGGAATGTTGCCGAGTTGGCCGAACAGGTGACCAGTGCACCACCTGGGACGCTGTACGCCTATCCCTCGGGCCAGATTATTTGTAGCAGTGACAACGTGGCGCCGATCAAAATAGAGACAATCGACAAGAGTGAAGTGCCCggcgagcagcagccgcaacagcagcagcacgctcaccaacagcagcagcaatgtcCTACTCCAAATGGCGTGATCTACGGCGATGGGATTGGGGTGAGCGAGGCTGCGCTGCAGCATcatcaccagcaacaacagcaccaacagcagcaacatcagcagcagcatcagcatgcagtagctgctgccgcggcagctgcagcagtcgGGCATCCACACGTGCGCTACGTGACCGAGGATGGACGCTTCGCCACCGCCAGCGGCGATGCTGAGGCGCCTGGAGCGAGTCTGTATTATGATGCGCCCGTTGTCGATGCAAGCGTGCAGCCGAATGAATCCAAGACCTACGCGGACCTGGGCAATGCCTATGCGTTTCCACCAAACTCCACGTACGGCGGCAACAACTATGCGGCGACACTGCAGCAGGGCAACACCATTTACAGTGTGCCGAGCACAGCTCAGTTTATAACCAAAGCCGATCCAAACTTGAATCCATTGAGGCAAACGGCAGCCGGACCGTATCAGACAATATCCTTCGTGGATGGGACGAGTGCTACAGACGGGAGCCTTTGGACTACCGCCGGAGCCGAATATCAGAATGTTTCATTTTCGAACTATCCTGCGCAGGTCATTGATGACTACTCCACGGCCCAAATGAGCGCTGGCCATTGGGCGCCAGCTGGCAGCATTAACAGCTACGATCCCAGCATGTCAgccagtgccacgccccccacaTCGCTTACCCTGCAAGAGATCAAGTGCGAAACCTGCCAGACACCGTTCATCCGCAAGGGCTCGGACTGGCCCAATTGTCCGAATTGCACCAGCTATGTTCGGGCGCAGGCGGTCCGCCATGTACCACAGcgccaaaaggcaaaagcgGCCGCCACGCCCAACAATCGTCGCAGCGGCGTCACCTGCGCCAACTGTCTAACCAATTCAACGACGCTTTGGCGACGCAACAACGAAGGCAATCCAGTCTGCAATGCCTGCGGCCTCTACTTCAAGCTGCACAACATGAACCGACCGCTCTCCATGAAGAAGGAGGGCATTCAGAAGCGTAAGCGAAAACCAAAGAACAATGGAGGACCTCTAACCCATCGGGCACTGCCAAGCATGTCACAGGGTGTTAACCTAATGGTTAATGGCGGCCCGCTCTATCCATCCCAGGTGGGATTGTCGATTAGCCAGCAGAACGGCAGTCCCGAGCTTCACGATATGTCCACTACTGGCCCCGCCGGGCGAGGACATGTGGTGGCCATTGCGTTACCCACAGTGCCAACATCGGATGGCACCTTGAACATGTCCCGTCATCATGTGACTAGCGAGAGCCACTCGCCTtatagccagcagcagcagcagcagcagcagcaacaacaacagcaacaacaacagcaacagcagcagcaacagcctcCGGCACAGAGCCAATCGCCGCATCTGCCTAATTCGAGTACATTGAATCGTCAGATTGCTCAGTCGGTTCCTCCCATTGAAAGTGGACGCACCTCTAATAGCGAGCTGACTCCAAGTGTCATAACGCGCACAGGTCTGCCGGAACGTTCATCGAATAACTAA
Protein Sequence
MEAQATQQQQQQQQQQQQQQQQQQQQQVLSKQQLQLLDKIKIESSNGNDPQANSVLEDPQEQQQQPPTTVGVLVQGSSQSSESDEQQQQQQQQQQQQQQQQQQQYVVAPRSQQRRILTTAGTLELNETRESEHSANNSNSASSETHIEYQRGAHHSPHYIQMAPRNVAELAEQVTSAPPGTLYAYPSGQIICSSDNVAPIKIETIDKSEVPGEQQPQQQQHAHQQQQQCPTPNGVIYGDGIGVSEAALQHHHQQQQHQQQQHQQQHQHAVAAAAAAAAVGHPHVRYVTEDGRFATASGDAEAPGASLYYDAPVVDASVQPNESKTYADLGNAYAFPPNSTYGGNNYAATLQQGNTIYSVPSTAQFITKADPNLNPLRQTAAGPYQTISFVDGTSATDGSLWTTAGAEYQNVSFSNYPAQVIDDYSTAQMSAGHWAPAGSINSYDPSMSASATPPTSLTLQEIKCETCQTPFIRKGSDWPNCPNCTSYVRAQAVRHVPQRQKAKAAATPNNRRSGVTCANCLTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLTHRALPSMSQGVNLMVNGGPLYPSQVGLSISQQNGSPELHDMSTTGPAGRGHVVAIALPTVPTSDGTLNMSRHHVTSESHSPYSQQQQQQQQQQQQQQQQQQQQQQPPAQSQSPHLPNSSTLNRQIAQSVPPIESGRTSNSELTPSVITRTGLPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00516656;
90% Identity
iTF_00516656;
80% Identity
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