Basic Information

Insect: Drosophila fulvimacula
Gene Symbol: salm
Assembly: GCA_035045555.1
Location: JAWNOX010000118.1:525331-536062[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.8e-06 0.00033 21.0 0.9 1 23 458 480 458 480 0.98

2 7 9.5e-06 0.00066 20.0 2.1 1 23 486 508 486 508 0.98

3 7 0.016 1.1 9.9 1.5 2 23 905 926 904 926 0.98

4 7 6.8e-08 4.7e-06 26.8 0.5 1 23 932 954 932 954 0.98

5 7 0.00021 0.014 15.8 2.3 1 23 964 986 964 986 0.98

6 7 0.028 1.9 9.1 2.9 2 23 1386 1407 1385 1407 0.97

7 7 2.7e-08 1.8e-06 28.1 1.3 1 23 1413 1435 1413 1435 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.8e-06	0.00033	21.0	0.9	1	23	458	480	458	480	0.98
2	7	9.5e-06	0.00066	20.0	2.1	1	23	486	508	486	508	0.98
3	7	0.016	1.1	9.9	1.5	2	23	905	926	904	926	0.98
4	7	6.8e-08	4.7e-06	26.8	0.5	1	23	932	954	932	954	0.98
5	7	0.00021	0.014	15.8	2.3	1	23	964	986	964	986	0.98
6	7	0.028	1.9	9.1	2.9	2	23	1386	1407	1385	1407	0.97
7	7	2.7e-08	1.8e-06	28.1	1.3	1	23	1413	1435	1413	1435	0.99

Sequence Information

Coding Sequence: ATGCGTAGTGACTTCAAGGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCAGAGAAAGATATAGCAAGTGATCAAGAGGATAATGGCGCCTGCTCGCCATTGACCACGGCAACGGCTAGCGCCAGTCCGGTAGGCAATAGTCCGTGTCCCAGCCGCAGCAGTCCGCAGCACCAGAGCGAGGACGAGCTGGACGGGGAATCGGACAAGCGATTGTCGCTGGAGAAAGCAGAGCTCGCCGCAGAGAAACAGCTAGAAGCCGATCAtaatcataacaacaacaacaacaataacaaagtgGTCATGACAAAGCCGCCCGTGGAGCAGGAACTGGAGCCAAACTCACCCACAGCCGCGACCTCCTCGCTGGAGGAGGAGGCGGCCAGTGGCCAGACCATGTGCCCCAAAAAGGAGCTGCAGGTGGACGTAGAGATGCAAGAGGCAGCAGAGGGAGCGGCAGAGCGCAAGCTGTCGTGCACGCCGCCAGCGAGCAATGCCCTGgatgcggcagcagcagcccagcaATTCGGTGCCACTCCTGTCACCCTGGAGGCCATACAGAACATGCAGATGGCCATTGCCCAGTTTGCGGCCAAGACAATTGCGAACGGCGCCAACGGCACAGACAACGAGGCGGCCATGAAGCAGCTGGCGTTCCTGCAGCAGACGCTCTTcaacctgcagcagcagcagctcttccAGATTCAGCTGATCCAGCAGCTCCAGTCGCAGCTGGCCCTTAACCAGGTCAAGCAGAACGAAGACGAGGCCGACGAGGAGCTCGAGCCGGAGGAGCGCGAGGATGGCGAAACGGACACctacgaggaggaggagcgcaTCGCCGACATGGAGCTGCGCCAGAAGGCCGAGGCACGTATGGCCGAGTCGAAGGCCCGCCAGCATCTCATAAATGCGGGCGTGCCCCTGCGGGAACGATCCCGATCCAGCTCACCAGCCGCCTCGTCGCTGTCCACGTCATCGTCGCTGAAGCGCCGACGTACGGAGGATGGCACCGCCAAGCCGGCCAGCCAGAACGTGAAGCTGTTCGGCGAGCAGGAGAGTCCACAGGATGCGCTCTCCAAGCTCAAGGAGATGGAGAACATGCCACTGCCCTTCGGCTCGGACCTGGCCTCGAGCATCATCACCAACCATGACGACTTGCCGGAGCCCAACTCCCTGGACTTGCTGCAGAAGCGCACCCAGGAGGTGCTCGACTCGGCCTCCCAGGGCATCCTGGCCAACAACATGGCCGACGACTTCGCGTTCGGCGACAAGTCCGGCGAGGGCAAGGGCCGCAACGAGCCGTTCTTCAAGCACCGCTGCAGATACTGCGGCAAGGTCTTCGGCTCGGACTCCGCTCTGCAGATCCACATCCGCTCCCACACGGGAGAGCGCCCCTTCAAGTGCAACGTGTGCGGCAGCCGCTTCACCACCAAGGGCAACCTCAAGGTCCACTTTCAGCGCCATGCACAGAAGTTCCCGCATGTGCCCATGAATGCCACGCCTATTCCGGAGCACATGGACAAGTTCCATCCGCCGCTGCTGGACCAGATGTCGCCCGACAGCTCGCCCACCCAGTcgccggctccggctccggcacCTGTGCTACCGCCGACCTCAACGTCCGCCCTGACGCAGATGCAGTCGTCGATGTCGTTTGCCTCGAGTGCCGCATTCCCCGGGCTGCAGGGCATGTACCGCCCGCCCATGGAGCTGCTCAAGTCGCTGGGCGCTGCTGCGGGCAGCGCCGCCGGACTGCCGCATCCCTTCTTCCCCCAGATGCCAGGCCTCGGCGCGGCACTGAagcacacacagcagcagcagaatcagGAGATGCCCACGGATCTGCGCAAGTCCTCGGGTCCCAGCTCGCCgcatgaggaggaagaagacaaCATCCAAGTGGCCAATTTGCCCGTGAAGACGGAGTTGATGGAGGAGGAGCGAACGGAGCATGCGGCAGAGCAGCAGGCGGCGGCTGATTGCGCCGAATCGGAGCCAGAGCCGGAGCCACTGCCGCTGGAGGTGCGGATAAAGGAGGAGCGCGTGGACGATgaacaggagcaggagcaggctcaggagcaggagcaggagcacgAGCAGAAGCACGTGCTGGAGCGTATGCCCCAGTCGGATGCACTTAGCCGACGCACACCGACGCCTTCCGCCTCCACTGTGGTGCACAGCCCACCGCCCATGCACCGGCACCACCACCACATTCACCCCCATTCCAGCTCCATGGCCGGCTATCCGCCGGTGGTGCAGCCCATCCAGCCACCAGCCATCCTGCACGCCCATTGCTCGCCCAGCTCGCAAGGGCACCTAGACGGGCAGCTGCCCACGCCCGGACAGCTGCCGCCGACAATGGCGCAGCGAGAGGACTTCTTTGCGGAGCGTTTTCCGCTGAACTTCACCACCAAGACGCTGTCGCCGGAGCACCACTCGCCCATACGCTCGCCCGCCGGccatgcccacgcccacgcccatatTCCGCGCTCGCCCTTCTTCAATCCCATCAAGCACGAGATGGCCGCCCTGCTGCCACGCCCGCACAGCAACGACAACTCGTGGGAGAACTTCATCGAGGTGTCGAACACCTCGGAGACGATGAAGCTCAAAGAGCTaatgaagaacaagaagatcaCGGATCCCAACCAGTGCGTCGTCTGCGACCGCGTCCTCTCCTGCAAGAGCGCCCTCCAGATGCACTACCGCACCCACACGGGCGAGCGGCCCTTCAAGTGCCGCATCTGCGGGCGCGCCTTCACCACCAAGGGCAACCTGAAGACGCACATGGCCGTGCACAAGATTCGGCCGCCCATGCGCAACTTCCATCAGTGCCCCGTCTGCCACAAGAAGTACTCCAATGCGCtcgtgctgcagcagcacatcCGGCTGCACACGGGCGAGCCGACGGACCTGACGCCCGAGCAGATTCAGGCTGCCGAGATCCGCGATCCGCCGCCTTCAATGATGCCCGGACACTTCATGAATCCCTTCGCCGCGGCCGCCTTCCACTTCGGAGCTATGCCAGGCGGCGGTCCGGGCGGCCCGCCCGGAGCAGCCGGCATGCCCGGCGGGCCGCACAACGGCGCCTTGGGCTCGGAGTCGTCGCAGGGTGACCTGGACGACAACATGGActgcggcgacggcgacgacttCGACGATGCCTCCTCGGAGCATCTATCCAACAGCAATGATCCCACAGCCGACGAGCGTCCGCGCTCCGGCGACGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATCGATCCCACTGGCGTCGTCAACATCAACAGCCATCAGCGGCCGCACTCGGCCGCCAGCAACGCCAATTCCATGGGCTCCGCGTCGGCCTCTCCCTCGGCTCCCACCAGCCCCAGCTCGCAGCCCAAGCCTAGCTGCTCGCCTGCTCGGTCCATCTCAGAGACTTCCCAGGGCGCACTCGATCTGACGCCACGCGCTGCTCCGCCGCCGCTTGCGTCGTCCAGCTCGCgctcgccgctgccgccgcccgcTGAGCGCAAGGAGAAGACAATCAGCCCGCTCAGCCAGCAGCCGCCGGTGCGCAGCCCGAACGGCCCTGCGTCGCTGCTGTCCGCGCAGCTGCCGCCTTCGGTGGGCATCGACTGCCTGCCGCCTGGCCTGCAGCatcatctgcagcagcagcatcagcacctgatgcagcagcaggccGCAGtggccgctgcagcagccgcccagcaccaccaccaccagatGCAGCAACATGCGGTGGCGCTGCACCAGCACCAGGAGCATCTGCGTCGCGAGGCGCAGGAGGTGCAGCAGAaggctgctgcagccgctgccgccgccgccgcagcagccgcggcCCAGCGCCAAGCATCACCGCAGCCCGCGCCGCGCTCCGGTGAGTCCTCAGTGAGCGGCCCGCCCGCCCCACCGAACCCGCTCATAACGGCGCGGCCACCCTTTGGCATGTTCCCCAATCTGCCCATCTTTCCGCCCGCCACCACGCAGAACATGTGCAATGCCATGAACCAAATCGCGCAGTCCGTCATGCCCGCCGCCCCGTTCAACCCGCTGGCGCTCAGCGGCGTGCGCGGCAGCACCACATGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATCCACTACAGGAGCCACACCAAGGAGCGGCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGGGTAACCTCAAGCAGCACATGCTGACACACAAGATTCGCGACATGGAGCAGGAGACCTTCCGGAACCGTGCAGTCAAGTATATGAACGAGTGGAGCGACGATCGAGAATAG
Protein Sequence: MRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATASASPVGNSPCPSRSSPQHQSEDELDGESDKRLSLEKAELAAEKQLEADHNHNNNNNNNKVVMTKPPVEQELEPNSPTAATSSLEEEAASGQTMCPKKELQVDVEMQEAAEGAAERKLSCTPPASNALDAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGANGTDNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKQNEDEADEELEPEEREDGETDTYEEEERIADMELRQKAEARMAESKARQHLINAGVPLRERSRSSSPAASSLSTSSSLKRRRTEDGTAKPASQNVKLFGEQESPQDALSKLKEMENMPLPFGSDLASSIITNHDDLPEPNSLDLLQKRTQEVLDSASQGILANNMADDFAFGDKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPAPAPVLPPTSTSALTQMQSSMSFASSAAFPGLQGMYRPPMELLKSLGAAAGSAAGLPHPFFPQMPGLGAALKHTQQQQNQEMPTDLRKSSGPSSPHEEEEDNIQVANLPVKTELMEEERTEHAAEQQAAADCAESEPEPEPLPLEVRIKEERVDDEQEQEQAQEQEQEHEQKHVLERMPQSDALSRRTPTPSASTVVHSPPPMHRHHHHIHPHSSSMAGYPPVVQPIQPPAILHAHCSPSSQGHLDGQLPTPGQLPPTMAQREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGGPPGAAGMPGGPHNGALGSESSQGDLDDNMDCGDGDDFDDASSEHLSNSNDPTADERPRSGDDFKSLLFEQKLRIDPTGVVNINSHQRPHSAASNANSMGSASASPSAPTSPSSQPKPSCSPARSISETSQGALDLTPRAAPPPLASSSSRSPLPPPAERKEKTISPLSQQPPVRSPNGPASLLSAQLPPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAVALHQHQEHLRREAQEVQQKAAAAAAAAAAAAAAQRQASPQPAPRSGESSVSGPPAPPNPLITARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00534052;
90% Identity: iTF_00532573;
80% Identity: -