Dful010399.1
Basic Information
- Insect
- Drosophila fulvimacula
- Gene Symbol
- -
- Assembly
- GCA_035045555.1
- Location
- JAWNOX010000191.1:7686762-7691340[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.6 1.1e+02 3.6 5.0 2 23 341 363 340 363 0.95 2 17 6.1 4.2e+02 1.7 0.0 1 23 370 395 370 395 0.92 3 17 0.0072 0.5 11.0 1.6 2 23 406 427 405 427 0.94 4 17 1.2 81 4.0 0.6 2 17 438 453 437 459 0.81 5 17 0.0063 0.44 11.2 1.0 1 23 495 517 495 517 0.95 6 17 0.0012 0.08 13.5 0.2 1 23 525 548 525 548 0.98 7 17 0.00042 0.029 14.8 0.3 2 23 553 574 552 574 0.97 8 17 0.0008 0.055 14.0 0.6 1 22 622 643 622 646 0.90 9 17 0.15 11 6.8 3.7 1 22 651 672 651 676 0.93 10 17 0.004 0.28 11.8 0.4 1 23 691 716 691 716 0.97 11 17 0.056 3.8 8.2 2.0 2 23 732 754 731 754 0.93 12 17 0.0021 0.15 12.6 0.1 2 22 760 780 759 782 0.87 13 17 0.39 27 5.5 0.6 2 23 786 808 785 808 0.95 14 17 4.1e-06 0.00028 21.2 1.2 1 23 814 836 814 836 0.98 15 17 0.007 0.48 11.0 0.7 1 23 840 863 840 863 0.93 16 17 4.6e-06 0.00032 21.0 0.9 1 23 869 892 869 892 0.97 17 17 0.0048 0.33 11.5 0.6 1 23 896 924 896 924 0.88
Sequence Information
- Coding Sequence
- ATGTCGGAAAACTCGAAAACAAGTAACAAAAGTGGGCTTAGCTGCCTGCATTGCAGTGTGTACAATTCAAAACAACAATACCATGAAATATTCGATGAAGTGGGCGTCGAAATTGAATTCGCCAAACTGTTGgacaaatatttccaaatcGTGGTCAAACCCGATGCGCAAAAGTCACAATTGCTATGCCAAGAATGCGTAAATACGCTACTTCGCTTCTTCGACATAGACGAACTGCAGCGTGAGCAGGATGCCGCCAATGCAGTCAAAAAGGCGGCCAAGCAAAAGGAGGAGCAGCCAAGTGCCGTTAAAAAGGTGGAAGCCCCCACGAAAAAGACGTCGCCAACGCCTGTGCCACAGGCAAAGGGCGCCACAGTTGCCGCTAAAACTTTACCATCGCCTGTTAAATTAGTGAAGCCGGCAACAGTcactgtcgctgctgctgctgctgctgctgcacccaAAGAGGCTCCAGAAAATCTAGGCATACGCATTCTCAGGGCCCGTGCCGCTACGCCCAAACAGTTGCCTGTCAAAGCCAAGGAGCTAGTTAAAGCCAAAGTGAAAGGTCGTGGCTCAGCCGATCAGGAACAGATCAGCGCACTCTTACGCGATATACTGGACGATGAGGAGCCGCCGGCAGATGATAAATTTGCCGAGGCCGCAGCCACCGTACGGCAGCTGGAAAAGCAAACAGTCAAAAAGCAGCAGGAAGAAGCGGAACAGgtggaggaagaggaaaacaaTGATGAGCTAGAGTTTCTGCTGGAGCAAGATGACAACTCATCCGAAGCGGATGTGCGTCACTTCAAAGTGGAGCGCAAGGTCAAGCGCGCTGCTTCCCGAACCCAatcccagtcccagtcgcaAAATGAAACCCAAAGCGAGGAGGAATCGTTCAAAGTGGAgccttttaattttgttttaatcaaAGAATCTGACAACATTGGCGATCTCCATGAATACCTGTCGACTGTGGTCAAGACCTGCTTTGAGACCTTGCAATTCGACTGGGCCACTGTGTGTCGTCATTGCTCGCTGAAATGCAACAAATATGAGACTTTGCTCGATCACATGGAGAAACGCCATAAGCTGGCAGATGACCACTACAATTGTCCCATTGAAGGCTGCACGGCGGAGCTGAAGGGACGCAAATATCTGGCCATGCATCTGGTGGTGCTGCATGCGCCTGTGGCAGAAATACCAATTTATGGCAAGTGTCCCGAGTGCAACATGACCTTCTCCAATATATTGCAATACAACAAACACTCCTGCGCACACGTCATTAAGAAGCGGCGCGGCATACGGCTATACTGTGAGATGTGCGGCTTGGAGTTTCCCTCGTGGAAGCGCTTTAATTTCCACAATCAGTTCCATTTGGAGTGCCACAGGCCGCGCGCCTGCTTCGTTTGTAATTTTGCAGACAACAACATCGATGAGCTCTTCCATCATTTGCACTATGCACACGAACCAGAGGGCACACACTTCTGTGATATCTGTGATCGCAACTTTCGCGATGCTGCCGTGTTTGAGGAGCACAACAAATCCCATTCGAATGTCAGCAGCACCACCTACAGCTGCTCTGAATGCAGCGCCAACTTTGAGACACGCGGTCGGCTCAATGGGCATCTGCGCACCGCTCATGGCAGTGTCATTAGCTGCGAGCTGTGCAGTCGCGAGTTTGCCACAGAGGCCACCTACAACCTGCACATGAAGACGCATCTGATTATTGAGCGTGAGGTGCACGTGTGCAGCGGCTGCGGACTGCTCAGCGAGAGCAATGATAAGCTGCTGCCTCACGTTGAGGCCCCGGACTCGGCTTGCTTTGGCATGGACATCTATGCGGAACTGCTACGcagtgcgtttgtgtgtgaatATTGCTCGtcgaattttaagcagaagaaCGATTTGCGTGCTCATCGCGATTCGGGTGTGCACAAGGATGGCTGCTTCACATGCCAGCCGTGCCGCAAGGAATTTTCCGACATGAAACTCTATCGTCACCATCTGCGCACCTTTCAGCAACATCGCACAGATTTGGCGCATCGCAATCTAGAGATATGCATCTACTACATGTGCGACTATGAGGACTGCACTGAGGCATATATTAACTGGAACTCGCTGTACACGCACAAGCGACGTTTGCACGATGGCATCATCAAGCCCGAGCCGCGAGCTAACGGAATCGATTGGATCTGCCAGTTCTGTCAGAAGCAATGCCGATCCAAAATGTCGCTGTCGGTGCATGTGGCCCGCAGTCACAATAATAATAATCTCATATGTCCGGTGTGCAAGGCCTCGTATAAGAATAAAGATGCTTTGGCTAAACATAACGCCTATTGGCATGAGCCTATGGAATGTCGTCTGTGCTTGAAACTGGTTAAAAATCGTCGCAATTATGACACACACATGAATGTGGTGCATTCGAATAACAAACGCTACTCGTGCAGCATCTGCCCCAAGGGCTTCTATCATAAAAGTGAAATGGAGGCGCATCAGCGGCTGCATAGTCAATCGTATACCTGCGACCAGTGCAGCTTCATCACACGGAACAAGAAGTCGCTGACGGTGCATGTGCTGGGCCAGCACTACAAACGCTTCGCCTTCGAGTGCAAGGAGTGCGACAAGCGTTTCGGACGTCGCCAGGGCCTCTCGAATCACATGCAGCGCGTGCATGGCTCCAAGTACACGTGTCGCGACTTGTTCGACGGCGGCTGCAGCAAATCCTTCAGCTCGACGACGCAGTTCAATATGCATGTGCGCCAGGCGCACAATGGCAGCATTTATTTGAAGGTTGATACTATCAAGGGCGAGGAACTggatgaggaggaggatgaggaCCAGGGGCTGGAGAAGGACCAGGACCAGGAGCaggagaaggagagggagaaggagagggagaaggagaagaagcaaCAAGGGAACAAGGAAGCTCCGTCGACTTCAAAGAAATGCAGCATGCGCACCCAAGCAAATAGAAAAACGGACTCAACCGCTGGGGCCGAGGATCATGAGACGCTCGACGGCccggagaagaagaagcaaaggctaacataa
- Protein Sequence
- MSENSKTSNKSGLSCLHCSVYNSKQQYHEIFDEVGVEIEFAKLLDKYFQIVVKPDAQKSQLLCQECVNTLLRFFDIDELQREQDAANAVKKAAKQKEEQPSAVKKVEAPTKKTSPTPVPQAKGATVAAKTLPSPVKLVKPATVTVAAAAAAAAPKEAPENLGIRILRARAATPKQLPVKAKELVKAKVKGRGSADQEQISALLRDILDDEEPPADDKFAEAAATVRQLEKQTVKKQQEEAEQVEEEENNDELEFLLEQDDNSSEADVRHFKVERKVKRAASRTQSQSQSQNETQSEEESFKVEPFNFVLIKESDNIGDLHEYLSTVVKTCFETLQFDWATVCRHCSLKCNKYETLLDHMEKRHKLADDHYNCPIEGCTAELKGRKYLAMHLVVLHAPVAEIPIYGKCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLECHRPRACFVCNFADNNIDELFHHLHYAHEPEGTHFCDICDRNFRDAAVFEEHNKSHSNVSSTTYSCSECSANFETRGRLNGHLRTAHGSVISCELCSREFATEATYNLHMKTHLIIEREVHVCSGCGLLSESNDKLLPHVEAPDSACFGMDIYAELLRSAFVCEYCSSNFKQKNDLRAHRDSGVHKDGCFTCQPCRKEFSDMKLYRHHLRTFQQHRTDLAHRNLEICIYYMCDYEDCTEAYINWNSLYTHKRRLHDGIIKPEPRANGIDWICQFCQKQCRSKMSLSVHVARSHNNNNLICPVCKASYKNKDALAKHNAYWHEPMECRLCLKLVKNRRNYDTHMNVVHSNNKRYSCSICPKGFYHKSEMEAHQRLHSQSYTCDQCSFITRNKKSLTVHVLGQHYKRFAFECKECDKRFGRRQGLSNHMQRVHGSKYTCRDLFDGGCSKSFSSTTQFNMHVRQAHNGSIYLKVDTIKGEELDEEEDEDQGLEKDQDQEQEKEREKEREKEKKQQGNKEAPSTSKKCSMRTQANRKTDSTAGAEDHETLDGPEKKKQRLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568422;
- 90% Identity
- -
- 80% Identity
- -