Dful016143.1
Basic Information
- Insect
- Drosophila fulvimacula
- Gene Symbol
- -
- Assembly
- GCA_035045555.1
- Location
- JAWNOX010000223.1:6235195-6237715[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 7e-06 0.00048 20.4 2.7 1 23 108 130 108 130 0.98 2 13 0.015 1 10.0 3.6 1 23 136 158 136 158 0.96 3 13 2.3e-05 0.0016 18.8 0.9 1 23 164 186 164 186 0.98 4 13 1e-05 0.00071 19.9 0.0 2 23 210 231 209 231 0.97 5 13 1.5e-05 0.0011 19.4 2.1 1 23 237 259 237 259 0.98 6 13 1.7 1.2e+02 3.5 5.7 1 20 265 284 265 287 0.94 7 13 0.0024 0.17 12.5 0.5 2 20 423 441 422 442 0.94 8 13 0.0011 0.075 13.5 1.4 1 23 457 479 457 479 0.98 9 13 0.091 6.3 7.5 3.7 1 23 512 534 512 534 0.98 10 13 0.0059 0.41 11.2 2.4 1 23 544 566 544 566 0.98 11 13 0.0013 0.092 13.3 0.9 1 23 572 592 572 592 0.98 12 13 2.4e-06 0.00017 21.9 2.0 1 23 598 620 598 620 0.98 13 13 0.011 0.77 10.4 0.9 1 20 626 645 626 648 0.91
Sequence Information
- Coding Sequence
- ATGAGCAACATCATCGACGTGTCCTGTGTGAAGATTGAGCCAGACCAGGAGGTGGAGCAGCAGTCAGAGTTCTCAGATGTCGCCAATTGTGCCCAGCTCGAACCTTTCACTGAGATAGACATAGGACCGATTAAAATAGATCCGGATGGGCTGAGCGAAGAGCCAGCAGGCAAGCCGACTGTAAAAACGGAGCCACCAGCTACAACTGCGTCGACTACTACAAAGGCACCGCCGCCTCCAAGGATTCGCAAGAGAAAGGGAGCTGCTGCAGtagtggtagcagcagcaccagcgctCTCTTCAACGGTTGTCAAAGGATTCCATCAGTGCCCGCATTGTCCGCGCCATTTCGATCAAAGCGATGAGCTGAACATACACCTGCTgatacacacaaataaactGTCCTACAAGTGTAGCTACTGCCCGAGCAGCTATTCGCACAAATCGATCTACACAACTCATATGTACGGCCATACGGGGAAGTTTCCGCATCAGTGTCCGGACTGCCCGCAAGGCTATATGAAGTATGCAGATCTGATGAAGCATCAACGCACGCATTTCGTCAAGGACCTGAAGAAGTGTCCTTTGTGCCCCAGCAACTGCATACACACGGACAAGAGTTTTCTGGAATGCCCGCAATGTCCGCGCGTCTTCTCCAAGCCCTTCGAACTGGAGATTCATCTGCAGATCCACAGCGACAAGTTGCCCTACAAGTGTCCATATTGCTCGGACAGCTTTGCCCACAAGTCCAATTTTACGGCGCACGTCCGCGACCATACGGGCGAACTGAGGTATAGCTGCCGCCATTGCTTGCAGGGATTTACGAAACGAAATGATTTCACTGACCACAAGTGCCCGCACAACAATTCCGCTCGGAGTAAAGATGGATATAAGAGGATCACGCGTGCAAGCGACAGCGAAGTGGAACGATTGAAGCAGGTGCCAAAGCCCAAGCCTCTGCCATCGGCAGTTCGAAGAAGAATCAGTCCACGAAAGTCGAAAACAGAAGAGAGCCTAAAAGAAACGAGAAAGGAGAAGGAGcatccacagccacagccgcagccacagcaatcCATAACTAAAGACAGTGCCTTTGTGAACTCGAATAGTACAAATGATTGGAAGCTGAGATCCATCAAAACGGAGCCGCAGGAGGAAGAGGAGCAGAGGAAGCCTAAGCAGCCGACTTTAAGTGTTAGCTCAACAATCGAAGCTAGCAAAGCTGTCGAGCAGCCTGCTGTAAGAGTCAATAAGATGCCCAGCcagaaatgcaatttgtgcaACAAGCAATTTCCTAGCTTaaaggagctgcagctgcatgcgAAATGCTGCAAGCCTTTGGGCAGGCAAAACGCCGTAAAATCTCCATTTGAATGTGAGCATTGCTTGAGAAAGTTCGCTCTGTTGTCCAGCCTCGAAGAGCATAAACTCACTCACTCAGCTGACCCCACACATAAATCCTCGCCGCACTCAGCTGACCCCACACATAAATCCTCGCCGCACTCTATGCGTAAACGTATACTGGAAAGTCCGTATAAGTGTCCGCATTGCGCGTGCATCTTTGGCAGCATGTTGAGCCGGAAGAAACACATGCAAATCCATCGAACTGAGATGCAGAGCGAATCCTGTTTCAGGTGTCAGCATTGTCCAAGTacctttaaaaaaatagattcTTTTCTGCTGCACGTACGTGGACATACGGCCGAGCGACCGTATCAGTGCACCTACTGCACGAAGGTAGTCAGCAGCGATCTGGAGAAGCATTTGCGCAATCATACGGGTGAATTTCCGTATGAATGTCCGCATTGCTCGAAAACCTTTGCACAGAGCGCGACCTTCAATTCACATCTGCAGAGCCATGCAGTCAAAGCAACCTTCCAGTGTCCCCATTGTCCGCGTGCCTTTCTAAGGGAACACAGTTACATAGTGCATCTGTGGATCCACACGGAAGACAATCCGTGA
- Protein Sequence
- MSNIIDVSCVKIEPDQEVEQQSEFSDVANCAQLEPFTEIDIGPIKIDPDGLSEEPAGKPTVKTEPPATTASTTTKAPPPPRIRKRKGAAAVVVAAAPALSSTVVKGFHQCPHCPRHFDQSDELNIHLLIHTNKLSYKCSYCPSSYSHKSIYTTHMYGHTGKFPHQCPDCPQGYMKYADLMKHQRTHFVKDLKKCPLCPSNCIHTDKSFLECPQCPRVFSKPFELEIHLQIHSDKLPYKCPYCSDSFAHKSNFTAHVRDHTGELRYSCRHCLQGFTKRNDFTDHKCPHNNSARSKDGYKRITRASDSEVERLKQVPKPKPLPSAVRRRISPRKSKTEESLKETRKEKEHPQPQPQPQQSITKDSAFVNSNSTNDWKLRSIKTEPQEEEEQRKPKQPTLSVSSTIEASKAVEQPAVRVNKMPSQKCNLCNKQFPSLKELQLHAKCCKPLGRQNAVKSPFECEHCLRKFALLSSLEEHKLTHSADPTHKSSPHSADPTHKSSPHSMRKRILESPYKCPHCACIFGSMLSRKKHMQIHRTEMQSESCFRCQHCPSTFKKIDSFLLHVRGHTAERPYQCTYCTKVVSSDLEKHLRNHTGEFPYECPHCSKTFAQSATFNSHLQSHAVKATFQCPHCPRAFLREHSYIVHLWIHTEDNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -