Basic Information

Gene Symbol
ct
Assembly
GCA_035045555.1
Location
JAWNOX010000053.1:241154-256807[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.6e-27 5.1e-23 80.9 0.0 3 72 714 784 712 789 0.95
2 3 5.5e-32 5e-28 96.9 0.0 3 77 1205 1280 1203 1282 0.96
3 3 3.4e-31 3.1e-27 94.4 0.0 3 76 1476 1550 1474 1553 0.96

Sequence Information

Coding Sequence
ATGCAACCAAAAAGTTTGCTGCTTCCACATGCGGCTCAAGGCTCAAATATTCATCAACTGCTGATTATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCCTTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAGGAGCACTTGGAGGTGAAGCGACAGCACATCATGCGCTTGGAGGCCCGCTTGGATAAGCAGCAGATAAACGAGGCGCTGGCCGAGGCTACCGCATTGGCGGCCGCTGTTAATGCCGCTgcgacaaacaacaacaacagcagcagcaataacaataacaacaacaacaacaacaacactcacaGTAGCCAGAGCAGCGACAATAACAATATCAATGCATTCAAGACAACTGATCTAACATCGACCCATCGGCAcaatgacgatgatgacgatgacaatGATCGTGATAATGAGCTGCGCGATGCCGAcggcgatgatgatgacggCCTGCACATGAGCAACagtgaccagcagcagcaacatgcagCTTTAGCCAACAATCGCCACGACAATGAGCAGGACAAGGACGATGCCGAGGACCACGATGCCGAAATGTCgaatgccacagccacagcagacAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTCAATGTGCTCAGTCCACAGTCGGCCATTGCCACAGCCGCCgcggccgcagcagccgctgcctgTGCCAACGATCCCAATAAATTCCAAGTCCTGCTACTGGAGCGGACCAAAGCATTGGCCGCCGAGGCGCTCAAGAATGGCAGCAGCGATGCCGTCAGCGATGAAatgccgcaacaacaacaagccgtAGAcgtagcaacaacagttgtaGAAgaagatgcagcagcagcagcagcagcagtagcaccaatagaaacagcagcagcagccgccgccacaGCCAAACCAGATTTGAACAAAGCTGGAACGAATGAGAATGAAACATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATGTTAGACACTGATGAGGCGCCAGCTGCAGTCCAAACGCTTGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAACCAGcactgccgcagcagcagcagcagcagcagcagcagcgccagcaacagcagcagctgcagctgcaacagcaactgggaGCAAAACGCCaacaatttatcaaaatgccAATGTggtgcagcagcaattgttgcccccgccgccaccgccacagcagcaacaacaaccgcaacaacaacaacaacaacaacagcaacactatcaacaacaacaacaacaacaacagcagcagcagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACCACcaactccagcagcagcaacagcagcaacagcagcagcagcagcagcaacagccacagctgcagcagcagcagcatctacacaacagcagcaatagcagcaacagcagcattgcCGGCAACGATCCTTtgaatcatcatcatcatggcCATCaccatgggcatgggcatgggcatgggcatgggcaacTGTTGCATTCGGCACACCATTTGCACCATGGCGCCGATTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAACAAGTCGCTGTTGCAGGCGGCGGCCGCTGCCAATGTGGCTGCGgcagccgttgccgttgccgaggacaacaacaacagtctgACACCCAATGCGAACGCAGCTGTggccgcagcagcaatggctgcCCATGCCCAGCATGCCGCCGCCTTGGGTGCACCCACCTTTCTGCCCAATCTGCCCAGCCTGCCGGCCTTCCAGTTTGCGGCTGCCGCAGCCGCCGGCCAGGAGGCTCGTGCGCATTTTCGCTTCGCGGACGCCGAGCTGCAATTGCAGCCGGGCGTTTCGATGGCCGGCCGATTGGGCGAATCGCTGATACCCAAAGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGTTACAACATggacaaatatgcaaatcagGCACTCGACACACTACACATCTCGCGTCGCGTTCGCGAGCTGCTCTCCGTACACAACATCGGGCAGCGTCTGTTTGCAAAATACATATTGGGGCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCTGGCCTGCCACAGTATGCTGGCCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGGCTCGCACACATACTCAGCGAGGCCTCCTCCCTGATGAAGAGCAACGTGGTCgccgcccagcagcagcagcagcagcagcagcagcaggagcaccAGCGTCGTCATGCCAGCGACGATGCGCACAGCAACGATGACAGCAAGTCGCCGCCGCAGAGCTGCAGCTCGCCCTTCTTCAAGGTGGAGCACCagatcaagcagcagcagcagcagcagcagcagcaacagcagcaacagctgcacgtCTCTGAGCATGCGCAGCGTGAGCAGCGCGAAgcggccgccgccgcagccgccgTGGCCgtccaccagcagcagcagcagcagcagcgcgagcAGCGTGAACAGCGCGAGGCAGTGCagcgcgagcagcagcagcggctgcgccACGAGGATCTTGCCCAGGACAAAATGGCGCGCCTCTACCAGGAGCTAATGGCGCGCACGCCGCGCGAAGCAGCCTTCCCAAGCTTCTTGCTGTCGCCGTTCTTTGGTGGCGCCGCTGGCATGCCCGGCGCCGCCGCCAATCCATTCCCCGCCACCATGGCCGATGAGAACATACGCCACGCCTTCGAGCGCGAGATCgttaagctgcagcagcagcagcagcagcagcagcaggcgcaggccGCCAACTTTCCCAACTTTTCCAGTTTGAtggcactgcagcagcaggtgctgAATGGGGCACAGGACTTGTCGCTGGCCGGCAAGGACATCAAGCTGAATGGGCAGCGGTCGTCGCACGACCAgcacagcggcagcggcagctccaaGGACGGCGATGCCGATGGGGATCGCAGCTTTCCCGCCCTGCCACACGTACGCAAAACGGAGGGCGGCGGCACGCCCGCACCGCCCGCACCGCCAGccgtcagcagcagcggcagcagcaacaaccccATTGCCGGCAGCGTTGCCAGCGTTGCCAGCGGCCACGGCAGCAACTCGGCCGCGCCCAGTCCATTGAGCAACTCGATCCTGCCGCCGGCTCTGAGCAGCCAGGGCGAGGAGTTTGCCGCAACAGCGAGCCCCCTGCAGCGCATGGCCTCCATCACCAACTCGCTGATCACTCAGCCGCCGGTCACCCCGCACCACTCGCAGCCGCAGCGACCCACTAAGGCGGTGCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAATCTCAACACCGAGGACATTGTGCGACGCGTCAAGGAGGCCCTCTCCCAGTACAGCATCTCGCAGCGGCTATTCGGCGAGTCCGTGCTGGGCCTGTCCCAGGGCTCAGTCTCCGATTTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGACGCGAGCCGTTCATCCGCATGAAAATGTTCCTGGAGGACGAGAATGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCACAGATGCCACAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGGCCAGGCGCAGCACATCATGCAGCAGATGCAGGCAGCCGCAGCCATGTCCGCggccatgcagcagcagcaggcagccgcTGCCCAGGCTGCTGCAGTGCAACAGGCCCAGGCTcaagcccaggcccaggcccaggcacaGCAgagccatcagcagcagcagcagcagcaggcacagcagcaggcccagcagctgctccatcATCAGAATATGCTGTTGACCTCGCCGGGTCTGCCGCCCCAGCATGCCATCAGCCTGCCGGCGGCGAGCACGCCCAACAGCCAGGCGGGCGGCAATCCCACGGCGGTGTCCACGCCGGGCAGCACCGATAAGAAGCCGATGCTGATGCCGGTGCACGGCGGTGCCCATGCGCCGAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACGGTATACGAGATGGCCGCGTTGACCCAGGATCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTCGGCGAGGCGGTGCTCGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAGCCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGCGAGCCGTTCATACGCATGCAGCTCTGGCTGAGCGACGCCAACAACGTggagcggctgcagctgctgaagaACGAGCGGCGGGAGGCGAGCAAGCGCCGCCGCAGCACTGGACCCAATCAGcaggacaacagcagcgacaccTCCAGCAATGATACGAACGACTTCTATACGAGCAGCCCGGGCCCCGGGTCGGTGGGCTCGTCGGTGGGCGGGGCACCGCCCAGCAAGAAGCAGCGCGTGCTGTTCTCCGAGGAGCAGAAGGAGGCGCTGCGTCTGGCGTTCGCCCTAGACCCATACCCCAATGTGGGCACCATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTCCGCatactgctgcagcagcgcctcgTCGAGCTGCACAAGGAGCGCATGGGGCTGAGTGGTGCGCCCATACCCTACCCACCGTActttgccgccgccgccctgCTGGGCCGCAGCTTGGCGGGCATTCCAGGCGCCGCAGCGGCCGCTggggctgctgcagcggcggccGCTGCCGTCGGCGCCGCTGGCGGCGATGAGCTCCAAGCGCTGAACCAGGCCTTCAAGGAGCAGATGAGCGGACTGGACCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAGGACGAACTGGAGCTGGATGCCAGCGGACATAACATGAGCGACAACGAGTCCATCGAGGGCGGCCACGAGCCCGAGAACACGCCCATATCCGAGTACGAGAAGGCACTGCAGAAGTCGGCGCTCGCCTCGGCCGCTGCTGGCTACTTGAACAACTCCGTGCGCAGCTCGCGTCGCAAGCCCGCCGCCCCGCAGTGGGTCAATCCGGCGGGCGCCAGCACGCCCATTGCGGCGGGCGCTGGCATCTCGGCCAACgatagcagcggcagcgagcgCATCATAAACGGCGTCTGCATCATGCAGGCCTCCGACTACGGCCGCGACGAGGGCGACAGCGTCAAAGGCGGCGACTCGAATGCCGATACCGAACACGAAGATCATGGCCACCTGGAGATTGATCAGAGTTTCATGGAGCCGGAGGTGCGCATCAAACAGGaggaagacgacgacgacgagccCTCCtcccagcaccagcagcagcagcagcaacagcaacagcagctggacaATGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGTGTGCGCCGACTGAGCAGCAATGGCGAGGCCGATGAGCATTGCGCCGCCGTGCAGCAggcgacggcagcggcagcagctgcgacgccagcggcagcagcagcagcgtggaACTACTAA
Protein Sequence
MQPKSLLLPHAAQGSNIHQLLIIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNSSSNNNNNNNNNNTHSSQSSDNNNINAFKTTDLTSTHRHNDDDDDDNDRDNELRDADGDDDDGLHMSNSDQQQQHAALANNRHDNEQDKDDAEDHDAEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQVLLLERTKALAAEALKNGSSDAVSDEMPQQQQAVDVATTVVEEDAAAAAAAVAPIETAAAAAATAKPDLNKAGTNENETLAEANLQPKIEMLDTDEAPAAVQTLEEQLVNSYWRRGFETSTAAAAAAAAAAAPATAAAAAATATGSKTPTIYQNANVVQQQLLPPPPPPQQQQQPQQQQQQQQQHYQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQQQQQQQQQQQPQLQQQQHLHNSSNSSNSSIAGNDPLNHHHHGHHHGHGHGHGHGQLLHSAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPTFLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQQQQEHQRRHASDDAHSNDDSKSPPQSCSSPFFKVEHQIKQQQQQQQQQQQQQLHVSEHAQREQREAAAAAAAVAVHQQQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFGGAAGMPGAAANPFPATMADENIRHAFEREIVKLQQQQQQQQQAQAANFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSHDQHSGSGSSKDGDADGDRSFPALPHVRKTEGGGTPAPPAPPAVSSSGSSNNPIAGSVASVASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQAQAQQSHQQQQQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPNSQAGGNPTAVSTPGSTDKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTPISEYEKALQKSALASAAAGYLNNSVRSSRRKPAAPQWVNPAGASTPIAAGAGISANDSSGSERIINGVCIMQASDYGRDEGDSVKGGDSNADTEHEDHGHLEIDQSFMEPEVRIKQEEDDDDEPSSQHQQQQQQQQQQLDNESAEKQLKVINEEKLRMVRVRRLSSNGEADEHCAAVQQATAAAAAATPAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00476522;
80% Identity
iTF_00509715;