Basic Information

Gene Symbol
-
Assembly
GCA_035045555.1
Location
JAWNOX010000137.1:6266683-6267767[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1 2.3e+03 -0.9 0.0 13 52 32 74 23 95 0.66
2 2 2.4e-11 5e-08 33.3 0.0 10 89 164 233 160 233 0.84

Sequence Information

Coding Sequence
ATGAACAACCCGCGAGATCATCTGCATTGCAGCAGAAGAGGCTGTACATACACAACGAACAGAGCGTATAATTTGGAGCGCCACGAACGGAACCATGACAAAGGCAAGGTGCCTATATCGCAGTGTCAGCCATGTCCGCACTGCACTTATGCCGCTGGATCTCTGCACAATTTAATGCGCCACATTAGTAAAAAGCACACAGGATCTACTGTAAAGACACAGCAACAAGTGATAATCAGTCAACCTGCCAAGTCAACACAACCaccatcaacatcatcatcatcatcaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccgcctccAACTGACCCACAGAATGAGCCGGGAACAACACAGAAGAAGTCTATGCCAAATGTAGAACCAGATCCCGAGCCGAAACAGACTGTGCAACAGTCAGTGAATCAGCCTGTGGATGCAGCGCTTTGGCTTTGGACtgcgccgcagcagcaggaaaagaATTTTATGAAGCGCAGTGGCCTCAAAGGCGAATGCGAGATATTAGAGCGGAGCGTCAATCTGTTCAAATTGTACGTGTTGGTGCAAGCGCGTGGGGGAGCTCTTGATGTTGACGAATGGGATGATGTTGCAGCAGCACTGAGCCTGCCTCCCGGATCAGGCTGTAATGTTGGTGTCAAGTACATGGAGGTGCTATTCGAATTTGAGAAGAAGGAGGAAGAACGCTTACAAGAATACCAAATTGTCTCTGGTGTGCCACCTTGGTGGGACGACGGCGATTTGATCAGCGAGGATGTGTGTTGTACATCCGAGGGCAAAGTATTGTGCCATTGGTGGAAAGATATGAATCGACCTTTTGTAACTGTTCAAAATGCtgttattaaattgatttacgaTAAGTATTATAGTAATCActtaagcaacagcaaaccgTTTCAACGGTTTTGCGTTAAAGACTCGTGGCTTCGCGCCACAATGATGAATTATCAAGAGCTAAAGTACCAACTACACTTCATTCATAGTTCTGCCTCCTGa
Protein Sequence
MNNPRDHLHCSRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTGSTVKTQQQVIISQPAKSTQPPSTSSSSSPPPPPPPPPPPPPPPPPTDPQNEPGTTQKKSMPNVEPDPEPKQTVQQSVNQPVDAALWLWTAPQQQEKNFMKRSGLKGECEILERSVNLFKLYVLVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEERLQEYQIVSGVPPWWDDGDLISEDVCCTSEGKVLCHWWKDMNRPFVTVQNAVIKLIYDKYYSNHLSNSKPFQRFCVKDSWLRATMMNYQELKYQLHFIHSSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544255;
90% Identity
-
80% Identity
-