Basic Information

Gene Symbol
grh
Assembly
GCA_035045555.1
Location
JAWNOX010000191.1:10714785-10747301[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.31 1.9e+03 -2.1 5.1 78 110 204 236 138 280 0.66
2 3 0.88 5.3e+03 -3.6 1.6 95 100 497 502 471 521 0.50
3 3 3.7e-63 2.3e-59 200.4 0.5 24 221 633 825 619 827 0.94

Sequence Information

Coding Sequence
ATGATGCAggatgccagcagcagctatgcCATATCCTACACAGACTGGATAGCCGAGTCACGACGCAGCAGCTACAGCCTagacacacagcagcagcatcagcagcagcagcagcagcagctccatcaTCAGCAGTTGCCACAGCATCTACCTCAGCATCATTATGGCAGCCAGTCGCCTGCGCGTTACTATGAGCCGcccaagcagcagccgcagcagcagcagcagctgcaacacctGCCGCTCACTGCCGCTGGGCTAATGCAATCGGTGGCAGCTGAGATACAATtgagcgagcagcagcagcaggccacGTCGCCGCCGCCCCCAGCAGCGCCCGATGCTGccaccgcctccgcctccgcctccgcctcctccTATGCTGTCTACAGCTACTACAGAGATGTCGATGCTGAGCAGCACAgatcccaacaacaacaacaacaacaagaacagcagcagcagcagcagcttgtgtGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTATCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGTctccacaacaacaatctcgcatcaacaacaacaacaacagcagcagcagcagcagcaacaacagcaacaacagcagcagcaacaacagcagcagcaacagcagcaacatcaacagcagcagcagccgccacatCCCAGCGACATTGTGACCATAACCACGGCAGGAGTGGGGAGCGCGGGCTCGATCGTCTCCGCTgcagtgcaacagcagcagcagcagcagcagcagctgctgagcaTCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCAGCCAAGAATGGCAGCCTGGGCGCCTCAGCGAACGGTTCGGTCATAACGCAGAAGATATTGCGCGTGGATGCGGCTAGGAGTGAAGCAACTGAGGCAATCGATATAGCCAAtaaaacggcaacagcaacaactgcaacagcaactgcaactagtCCCGCCAGAGCGACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAATGGAACCAGCACACAGCAGAGCACATTGCAAGCACAGAGCCCCAGTCCGGGTCCATATATCACAACGGATAGCTACGGCATGTACACGACGACACGATTGCCACCTGGACCGCCACCTGCCACCACATTCATAACGGAGCCCTATTATCGTGAATATTTCGCGCCCGACGGCCAAGGCGGCTACGTGCCAGCGGGCACAGCGCGCAGCCTGTACGGCGAAGATGTTTCCGTAACGGCAGCCGCCCAGCCACAGCCCGTGGGCGGTGTCTATGAGGCGCGCTTCACCAGCAATGcgcccaccaccaccacagTGCTAACCAGCAGCAATGCACACCACCAcagtcagcagcaacagcaacagcagcaacagcaacagcaacagcaacagcagcagcagcagcaacaggagcagtCGGGCAAGAACGGGGGCACGCCGCTCTATGCCAAGGCCATAACGGCGGCGGGTCTGACCGTGGACTTGCCCAGTCCCGACTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTTTCAGTGAATAGCATACAGCAGCGCACCGTGGTCCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACGAGCACAAATGGTTCGACACGTTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGctgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGATGAGATAAAGGCCTGGCAATTCTGGCATAGTCGCCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTGGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGCGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGTAAGACGCGCGATGAGGAACGCCGCGCGGCCAAGCGTAAAATGACAGCAACTGGACGCAAGAAGCTGGACGAGCTCTATCACCCAATCACAGATCGTTCCGAATTCTATGGCATGCAGGATCTGGCCAAGCCTCCAGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTATGGTCATGAGACTGACTCGCCCGAATTGAAAGGCGCCTCGCCTTTTCTGTTGCACGGCCAGAAggtggccacgcccacgctcaAATTCCACAATCATTTTCCGCCCGACATGCAGACTGATAAAAAGGATCATATACTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCCATGAAACGGGGTCGCATGACGCCGCCAACCACGGAGCGTGTGATGCTCTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGTTGCATGTGGTGCCGCCCACGACGATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATCTTCTTGCTGGAAGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDASSSYAISYTDWIAESRRSSYSLDTQQQHQQQQQQQLHHQQLPQHLPQHHYGSQSPARYYEPPKQQPQQQQQLQHLPLTAAGLMQSVAAEIQLSEQQQQATSPPPPAAPDAATASASASASSYAVYSYYRDVDAEQHRSQQQQQQQEQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQLLSIKREPEDLSKDPAKNGSLGASANGSVITQKILRVDAARSEATEAIDIANKTATATTATATATSPARATADLEMYATTGGTQIYLQTSHQNSNGTSTQQSTLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTAAAQPQPVGGVYEARFTSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPITDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00544231;
80% Identity
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