Dfor014643.1
Basic Information
- Insect
- Drosophila formosana
- Gene Symbol
- hang
- Assembly
- GCA_035045625.1
- Location
- JAWNOW010000765.1:543582-558806[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.38 24 5.6 1.0 3 23 570 591 569 591 0.93 2 18 0.48 31 5.2 3.2 3 22 698 717 696 717 0.89 3 18 0.00081 0.053 14.0 3.3 1 22 821 842 821 844 0.90 4 18 0.094 6.1 7.5 0.1 2 21 856 875 855 876 0.93 5 18 0.00094 0.061 13.8 0.2 2 23 1024 1046 1023 1046 0.95 6 18 0.0027 0.18 12.3 0.1 1 23 1054 1077 1054 1077 0.96 7 18 2.2e-05 0.0014 18.9 0.1 2 23 1163 1184 1162 1184 0.97 8 18 0.00039 0.025 15.0 2.9 2 23 1281 1303 1280 1303 0.97 9 18 0.031 2 9.0 0.2 2 23 1312 1334 1311 1334 0.95 10 18 0.0032 0.21 12.1 0.3 1 23 1347 1370 1347 1370 0.97 11 18 0.00017 0.011 16.1 1.1 1 23 1425 1447 1425 1447 0.99 12 18 0.0026 0.17 12.4 0.9 1 23 1455 1478 1455 1478 0.96 13 18 0.36 23 5.6 0.3 2 19 1486 1503 1485 1504 0.93 14 18 3.6e-05 0.0023 18.2 0.4 3 23 1596 1616 1595 1616 0.98 15 18 0.0068 0.44 11.1 0.1 1 23 1651 1673 1651 1673 0.97 16 18 0.00081 0.052 14.0 0.6 2 23 1761 1783 1760 1783 0.93 17 18 0.0087 0.56 10.7 0.3 3 23 1839 1859 1839 1859 0.98 18 18 5e-05 0.0032 17.8 2.5 1 23 2279 2301 2279 2301 0.99
Sequence Information
- Coding Sequence
- atgtgcgacgctgccgcaacaacaaccacaacaacaatagcagtaGGAggtggtggaggaggaggaactGCTGGTGACACAGCGCCATCTATGgacgagcagcagccagcGGAACGGCAGCGACAAAGCTGCTGTCGCTTGTGCATTGCGCCCGCCAGCGAATGCATATCGATCATCAACAGCTATGCAGCCGATAAGGAGCCGCTAGCCACCAAAATACACAACTGCGTAAATATCAAGATCACATCAACGGATCGTTTGTCGCTTCACATTTGCCACGCCTGCATCAGCTATTTGAACTCGTGGCAAAGCTTCAAAAACCGCTGCCTCAGCTCACAGACGAAGCAGCGACAATGGCTGGACACGGatcgcaacagcagcaaacagcagacGCTCCTGGGCTATTTGGATTTGAATCGGGCCGAGAATGGCGGCAGCATTGCTGCCGTGGTGGAGCCGCAACATCTAGCTGGCGAGTTGAAAAacgatgcagcagcagctgctgagaAGGCGTCCGTCAACATTTTGGATGGCATTCCATCGCTGAAGAAGCGCAAATCGTTAACAGTCTATGTGAGtcccaagcagcagcagcatcaactgcaactgcaacagcaacagcagcaactgcaactgcaacaacagcagcaccagcagcagcagcagcaactactgCAAACGACGGCAAGAGCAGCGAGCTTGGCAATGGCAGCGACtgagcagccacagcagcaaacaTTGCAGACCCTTTTATTGCAGGTGCCTTCgacagcagcaatggcaacgtcgcagcagcaacatcgcaagcatcaacagcagcaacagcaacaacagcgtgTCAAGCAGTCTCAGATGtcgcagcatcatcagcatcagcatcagcatcaacattaTCACcagcagttgcaacagcagcagcgccatcGACGCATTCGACAGCCGCGACGTCAAGTTCctgctcagcagcagcagcagcaacagcagcagtcgcagcagcaacgtTTGCCCAAAGTGAAGCCCAAAGTCTATTTACCATTGGATATTGCAGTGCCGCCCTTGCCACCGATACCACTACCGATTCCGATACCGCTAACCACGCCGCTGTTATCGTcatctgttgctgctgttgagatGACAGCcggagcagccgcagccgcatcgtcgttgccattgccgctgTCGTCGCTGCCCATTGATTTCAGCCAGTGTAAGAATCCGATTCAGAATCCGTCTCAAAAATGTAGCAGCAACGTCGTCGTCTTgccaacgtcgtcgtcgacagTACCAtcgtcgctgccgccgccgcctccgctcCCGCTGCAtccgcagccgctgccgctgccgtcgtcgtcaGTTGCCccaatgagcagcagcagcagcagttgcaatgTCGTCGCTGCAGtcacgacaacaacgacgacgacgacgccgctgCTGATGCCGCCACTGCCCGCCGTGCCCATCAAGGATGAGCCGCTGGACGACACGGACGATGACTTCCAGATGAAGTGCATTGACGAGTCCGACGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCGCTAATGACCTCCGACTATGATTATACGGCGCAGCACGGCGTGACGGCGGCCGTGGCGGCGGCATCGCTGCCGGCGAGCGCCGTGGCCAATGTGGCAGCCGCCGGTGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGCCTGCAGTTCTCGACACGGGCAAATGCGCGACGCCACGAACGCAATCTGCACCCGAATCTGTTCCAACTGTCGACAGACTCGCCCAACAACACGCCGATCACGAAGCCAACGCCAGCGCTCGCTGCCGCACTGGAAATTCAAcgtgccgccgccgcagcggcagcgacggcggAGGCAACAAAGGCGGCAGCCGGCGGCAATATATCGACACAAAAGTACCGCCAGGTGGTGATGAATACGTTCATCAAGTGCGAAAACGGCGGCTATGACTACGACAATCCGGAGCAATATCAGCAGCTGTTGAGCCGCGACAAAGTCGAATTCATCCAGGAGAACAATGAGTTTCTCGAGCAGTATCAGACGATGACGTGTCGCTGTTGCAACAAATACTTCAGCACCTACAAGAACTTTATGGCGCATGTGCGCAAAAAGTATCCGATGTTGCCGCGCAATCTGTGCTTCAATTGCCTCAAGATGAACGATTCGAAGGCGCTCTTCATATCGCATCTGAAGAAACGCAACTGCGTCAATCTGTTCCGTGTGCTGAACGCTTTGCGGCTGAAGCAACCGAACTTTGCCCACGCCACAGCATCGGGTGTTGTGGCCACCAGCACCACAGAGCCACAGcaagcacaacagcaacagcaagcacagcaacagcaacagttgctgcacGACACGTCGAGCACTGAGCGGCCGGAGAAACTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAATTGTGCCCGAAGGGATTCCGCACCAAGCACGAGTTTCGCACGCACGTGTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTCTGCGGCCTGGACTTTGCCGATCCCGTCGACCGGCGCCGGCACTACAACAACATGGACTGCATTGTGCGGCTGCGTTGCATGACCTGCGATGCCAAACTGGAGACGCATCAGCGCTTCCTCGACCACGTCTATCAGGATCATCTCGGCGGCGTGAGCAGCGACAATGCCTCATCGACCGCCAACAGTGCCCTCGATCAGTCGCATTCGCCCGGCAAGCGCAGTCTGCTCGGCGCCCTGGGCATCGGAGTCAGTCAATCGTCCAACGATGAGTcgcgcggcagcagcagcatcaacaacaatcacagcaacagcaatgcggCCGCTGCTCCAGCTGTTCCTGGCGCCCCGTTGACCTCCACGCCCTCGAGGCCAACGTCGAATTCGGCGAGCGCTCCGAGCTCGGCCAATcgtggcagcagcggcggtggcggcggcggcggcggcggcagcgatTCGGCGCCCAAATCACAGTATTTCTCACGCATGCCCCAAGTTTGCCCCATCTGCGGACAGCagtacaacaactacaacaatgtGCTGCGCCACATGGAGTCGAAGCATCCCAACAAGCTGCCCGAGACCTACAAGTGTGTGCGCTGCGGCCTCGGCTATCCACGGATCTCATATTTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGTCATTCCGGCGGCTTTGAGTACATCGTCAATGCGGATGCCGTGAAGCTCGCCGATGGCAGCACGCCCAACGTCTATACGGGACGTTACGATTATGTGATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGatgacgacgaggaggaAACCGGGAGTCTGGCCAAGAAGATACGTctcgacgacagcagcaacaacagcagcatcaacacgAGCATCGCCAACCAGCAAAAGGAATGCCCCATCTGCAATGCGGTcttcagcaacaacattggCCTCTCCAATCACATGCGCTCGCATTACACGGCCTCCTCGACGGCCACCAATGCCGCGTTGGCCGCCGCCAATCGCATGACACCCAAATCGCTGACAATCACAGCGACACCGCCGCTggaagtggcagcagcagcagctgtggcaAGCACCAACAGTGGCACAGCAACGCCGACTGCAATTGCGGCGGGATCGGCAACAGCGACGCCAACTGGCGGCAAAATTCCACCAGCGATGGTGCATCAGACGGCGCAGGAACAGGCGGTGTTTCGACGCAGCTTGGATCAGGCGGCGGATCGTCGCTTTCGTCGGATGCGTTGTCGCATCTGCCAGCGGCGATTCAGCTCAAAGAAGTCGTATCGCTACCACATGCTGACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCCGAATTCGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGTCGGGCGATCAAGGATGAGATGATCGTCAAGCAATTCGAATGCGATGTCTGCTCCACCGTCTACAGCTCCGAGCTGGAGTTGCAGCAGCACAAGCGTAACGTCCACAAGTCCAACACAACTAAATCCTcgacagccacaacagcagcggcgactGTCGCGGCGACCACAACGATCGCAGCGAGCTCGTCGGCCGCAtcggcagcggctgctgcgtCTGCGGACCTCGCGGCAGACACATCGATATCGGCGGTGCTGCCGCTGTATTGGTATCAATGCAAGTACTGTCCATCCAATTTCAATACCAACAAGAAGCTGGCCATCCACATCAATTCGCACGACGAGTTCGACTCCAACGATTACTCGTGCAAGGACTGCGGCAATGTGTACAGCGGTCGCAAGAGCCTCTGGGTTCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCGGTCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGACAATCACACGCCCACCTGCAATCGCAAACCCATCACGGCAACGGGCGCCCATCAGCAGGAcgcccagcagctgcagcaccgGGAACAGCTGCAAGCGCAACGCGGCATCTTCAAGCACAAGAcgggcgacgacgacgatgaggatgaggacgaTGACCAGCTCCTGCTGCTCGACGATGCCACAGTGGCggcaacagccgcagcagcagcagcagcgcccaGCGATGCTGGCAATGCGGCGGCATCGATGTCGGGCATTAAGATACGCATACCGGAGGTGGCGTGCACCATTTGTGGGGCACGCTTCACCGACCAGGAGATGTTCACCAAGCACATACAGAAGCACGAGCAAGAGCTGTATGTGGACAATCCGCTGGCAGCGATGTTCGACGATGGTCCCGCCGATGCGGGCCAGTTTCAGGTGGAGCGGCAGAATGAGAACGGGGAATATGCGTGCGATTTGTGCGCGAAGACGTTCCCGCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATCGACGGCGAAGCGACAACGctgaacaacagcagcagcagcaacaacaacaacaacaactcgatgCTGCATCTGCGCGAACTGCATGCGGTGGGTCTGATGcccaaccagcagcagcagcaacagaagcaacagcagcagcagcaacaacagtcgcagcaatcgcagcagcaatcgagccaacagcagcagcaacaacggagCAAATCGCTGAAGCGCAAACGTGAGCTTAAGTGCGAATATTGCGCCTCCACCttcatcagcaacaacaatctgcGTCGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAATCTGCCCGAGCCGCCGGTCATTCAGGTGGACGCCGCCCTCAGTTGTCGTCGCTGCGGCGATCTGCAGTTCGACACGAAGGAGGCGTGGATCGAGCACAAGTTGGCCGACGCCAAAGTGGTGCGTCCGTTCTGTCCATTCCAGTGGGGCTGTGATCTCTGTGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATCAATCACATCAACAATCACCTCAAGGAGGACGTCATTGTGCCGGTTGCCACCACCAGCGGCGCCAAGAGCAAGCTgtcgacagcaacagcaacagttggcggcggcggcggaggaaaagcagcaacagctgaagCCAccacagcggcaacaacaaaggcatctgcagctggagcagcaactGGATCGGCTCAAGCAGCCATTAAGCTGAAGGTtaagagcgagacagcgacgacgacaacgacggcggCGGGCAAGGAGCGAGAGCGGGAGGAGGAGGATAGTGAGCTGGAGGATGACAGCGATagcgacgatgatgatgaggaggaCAGCACGAGTGCCgaggacgatgacgatgtCGACGAAGACGAGGACGATGAGGTCGACGATGAAATTGAGCAGCGACCactcaacaacaataacaacagtaatagtaacaacaacaacaatgccgtCCTGGATGACGACGATCTGATCGAGGAGcagcacaGCTCCGAGGAAGATggcgacgaggaggaggaggtggatgatgacgatgacgaagacgacgatgaggacgaggacgacgaggatgaCGACGTGGAAATGGAtgaagaggaggtggtggaAATGGAGGTGGAGGGTGGCGAAGGCATGACCATTGATGATATTATCGAAGAGGATGATGGCgaggacgacgatgaggaggaTGATGATCGTCAGCATCTGGTCGCTGAGCATGTGGTggccgatgacgatgatgacgacgacgacgaggaggatgatgacaatgacaacgacgatgatgtgaatgtggatgtggatgacgacgatgatgacgacgatgatatCGATGATGTGGATGATgtggatgatgatgaggacgaCGATATCGATGAGGATGACTTTGATGACGAACAGCAGCGTCGGAATGTGGGCGGCAATGCGCGTGATATTGTCCAGGATGAcatcgatgatgatgacgatgacgacgctGAGGATGAGGACGACGACACCAATGTtgcatctgctgctgcaggcgATGCGAATGCAGCGGAGCAAcatcgtcggcgtcgtcgtcgccatcagcagcagcgtcgacaTCGTCGTCgcagcgatgatgatgatggtgtgATGGCTGTGGATGGCGATGAAGTTGGCACTTCGTCGTCATCGGAGAGTgagtcgacgacgacgacgtcgcaaTCGCAGTCAACTGGTGAGCGGcgcaataaaagcaaatctGTAGTTTCATCATCAGCGGCATCAGCGGCCGCTGCTGATCACTCTAATTCCAGCTACACGTGCGATCTATGTCAACTTTGTTTCGATTCccaggagcagctgcagacACACATTAAATCCCATTTTCTCAACGGgccgacgacaacgacaacaactgcgggcagcggcagcagcagcggcggcagtcgaagcagaggcagcgccgcaaataacaacaacagcaccgctaacaacaacaacaacaacaacaacaacaatgataaccataaaagcaaaaccaaaaaggagactgcagcggcagcgacgacggcgactgcagcagcagcagcagcagcaacgtcgacggcaactgcgacagcgacagcgtcCGATGCTGGCGCGAGCTTGAACTGA
- Protein Sequence
- MCDAAATTTTTTIAVGGGGGGGTAGDTAPSMDEQQPAERQRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITSTDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTDRNSSKQQTLLGYLDLNRAENGGSIAAVVEPQHLAGELKNDAAAAAEKASVNILDGIPSLKKRKSLTVYVSPKQQQHQLQLQQQQQQLQLQQQQHQQQQQQLLQTTARAASLAMAATEQPQQQTLQTLLLQVPSTAAMATSQQQHRKHQQQQQQQQRVKQSQMSQHHQHQHQHQHYHQQLQQQQRHRRIRQPRRQVPAQQQQQQQQQSQQQRLPKVKPKVYLPLDIAVPPLPPIPLPIPIPLTTPLLSSSVAAVEMTAGAAAAASSLPLPLSSLPIDFSQCKNPIQNPSQKCSSNVVVLPTSSSTVPSSLPPPPPLPLHPQPLPLPSSSVAPMSSSSSSCNVVAAVTTTTTTTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLSRDKVEFIQENNEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPMLPRNLCFNCLKMNDSKALFISHLKKRNCVNLFRVLNALRLKQPNFAHATASGVVATSTTEPQQAQQQQQAQQQQQLLHDTSSTERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASSTANSALDQSHSPGKRSLLGALGIGVSQSSNDESRGSSSINNNHSNSNAAAAPAVPGAPLTSTPSRPTSNSASAPSSANRGSSGGGGGGGGGSDSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDEEETGSLAKKIRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASSTATNAALAAANRMTPKSLTITATPPLEVAAAAAVASTNSGTATPTAIAAGSATATPTGGKIPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSELELQQHKRNVHKSNTTKSSTATTAAATVAATTTIAASSSAASAAAAASADLAADTSISAVLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLDNHTPTCNRKPITATGAHQQDAQQLQHREQLQAQRGIFKHKTGDDDDEDEDDDQLLLLDDATVAATAAAAAAAPSDAGNAAASMSGIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIIDGEATTLNNSSSSNNNNNNSMLHLRELHAVGLMPNQQQQQQKQQQQQQQQSQQSQQQSSQQQQQQRSKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIQVDAALSCRRCGDLQFDTKEAWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATTSGAKSKLSTATATVGGGGGGKAATAEATTAATTKASAAGAATGSAQAAIKLKVKSETATTTTTAAGKEREREEEDSELEDDSDSDDDDEEDSTSAEDDDDVDEDEDDEVDDEIEQRPLNNNNNSNSNNNNNAVLDDDDLIEEQHSSEEDGDEEEEVDDDDDEDDDEDEDDEDDDVEMDEEEVVEMEVEGGEGMTIDDIIEEDDGEDDDEEDDDRQHLVAEHVVADDDDDDDDEEDDDNDNDDDVNVDVDDDDDDDDDIDDVDDVDDDEDDDIDEDDFDDEQQRRNVGGNARDIVQDDIDDDDDDDAEDEDDDTNVASAAAGDANAAEQHRRRRRRHQQQRRHRRRSDDDDGVMAVDGDEVGTSSSSESESTTTTSQSQSTGERRNKSKSVVSSSAASAAAADHSNSSYTCDLCQLCFDSQEQLQTHIKSHFLNGPTTTTTTAGSGSSSGGSRSRGSAANNNNSTANNNNNNNNNNDNHKSKTKKETAAAATTATAAAAAAATSTATATATASDAGASLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00614322;
- 90% Identity
- iTF_00520770; iTF_00614322;
- 80% Identity
- -