Dfor012229.1
Basic Information
- Insect
- Drosophila formosana
- Gene Symbol
- bab2
- Assembly
- GCA_035045625.1
- Location
- JAWNOW010000654.1:3725093-3727375[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-10 5.9e-07 29.1 0.0 1 44 427 470 427 471 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGACCGACGCCAGTGGCGGGCAGCGGCGAGGGCGGCCAGACGTATTGCCTGCGCTGGAACAACCACCAGACGAATCTCGTCCAGATACTGCACGCCCTGCACGAGGTCGGCAGCTATGTGGACTGCACCCTGGTGGTGGACGACGAGCAGTTCAAGGCGCATCGCGTTGTGCTCGCCGCCAACTCGCCCTACTTCCAGGCCATACTGCAGGATGTGCCGCAGGACCAGTGCAGCATCATCCTGCCGGGCGTGAAGGGCTTCGAGATCGCCGCCCTGCTCCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCCGAGATTCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGCCTCTACGACAACCTCATGAAGTTCAATCACAAATCCGCCGCCGTCGAGGAGCGCTCACAGTTCGAGGGCAGCCATCActcgcatccgcatccgcattcGCATCCGCATCATCTTCAGCACTCGGCGCCCACCTCCAGCTCTGGCAGCAAGTCGCACAACGGCGCCAGCGCCAGCTCGGATGCCGGCTacggacagcagcagcagcagcacaattCCTCCTCCGTGATCTCAACGTCGACGCACATCTCGCCCAGTGCCGCCATCTCGAGCAGCTGctcgccgccaccgccgccctTCGGCGCCTACCAGCCCAACTACTCGAGTTTCCCGCCCGCCCACTCCAGCGGCGTGCCCCTCAACATGAACGCCCACATCCCGGCCGGCGAGACGCCGCTGACTCCCACACACTCCACGCCgcacgccgccgccgccgcctccggcGAGGCTGGCCACGGCCAGTGGCCACTGACGCCCtcggccgccgccgccgccatgCTCAACTCCGTGTACGAGTCGGCGGCCGACATGAATCCGCTGAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCAACAGCACGCGGGACACGCCCATTCTGCGCAACGTGCTCGCCCAGGCCAACCCGGCGGACTCGTCGCAGCCCACGCAGCTGATGCTGCCCGGCGTCAAGagctcctcctccgcctctgGCGCCGACAAGACGCCCACGCACCAGCATCCCCACCAGCACTCGCATCAGctgagcagcggcagcgccgCCGGCGCCGGCAGCCACAGCTTCAACGGCTCGGACTACGGCGGCGACAAGGAGCCGCTCTCCCCGCACACCGACCGCTCGTTCGACGACGAGACGGGCGGCCAGAGCGGCAAGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGTGCCATCCAGTGCGTCCGCGAGGGCATGAGTGCGCTGCAGGCGAGCCGCAAGTTCGGCCTGCCCAGCCGCACGCTCTACGACAAGGTGCGCAAGCTGAACATCACTACCGGACGCGGTACCCACCGCACTCCCAAGCGCAGTCCGCCCGGCGTCGGCGGCGTCGAATCCTCCGCCGCGTTTCCCTATTCCGCTGCTgcggccgccgctgccgctgcccacAACTACGGCCAGCCGGAGCTGGAGCGCGACGTGAAGGAGCACATCCACGGCCACGGCCATGGTCATGGTCACGGGCATGGGCAGGGCTCGGGACACGGTCACCACGGCATGACGCCAACCATTCCGCACTCGGCTGCCGCGCTGCTCGATCACGCCTTCCTGCAGCAGGCGCTGGAGAATCGTGGCAACGACATTGCCGGCCGCGAGGCGCTGCATGCCATGGCCCTGGCGGCCGCTGCCCACGCGGCAGCCAATCGCATGTCCAGCAGCCCGCCCGGCTCCAACGGCCATGCCGCCGGCTCGCCGGGACATTACGGCAAGCAGGATGCGCTGGAGAAGCACGACCAGGCGATAATCAAGCGCGAGGCCATCGAAGAGGAGCGCGATGCAGATGACGAGGACGATCACGACCAGGATCACGATCACGAGCACGATCGCGACCGCGATCACGATCACGATCAAGTCGAGGATCTGTCGCTGGCACGCAAGGAACGCCCCGAGTCCCCGTACTCGCCTCCCCAGCCGCGCGCCGCCTCGCCCATGGAGAGCGCCAGCGTGATCATGCACTCCGCCTCGGCATCCACCAACGGGAAGGAGGCGCATGAGCTCGAGCCGGAGCAGGAGCACGAGAACGAGCACGATAACGATCGCGATCACGATCACGATCACGATCATGAGATGGAGGAGTACAATGAGGCGGCTCGATCGCCGGCCCTGAAGCGGGAGCTGCTTGGCAGCGAGGAGGCGCAGGCCCGCACCGACTGA
- Protein Sequence
- MGGPTPVAGSGEGGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKSAAVEERSQFEGSHHSHPHPHSHPHHLQHSAPTSSSGSKSHNGASASSDAGYGQQQQQHNSSSVISTSTHISPSAAISSSCSPPPPPFGAYQPNYSSFPPAHSSGVPLNMNAHIPAGETPLTPTHSTPHAAAAASGEAGHGQWPLTPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPTQLMLPGVKSSSSASGADKTPTHQHPHQHSHQLSSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDDETGGQSGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAHNYGQPELERDVKEHIHGHGHGHGHGHGQGSGHGHHGMTPTIPHSAAALLDHAFLQQALENRGNDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAAGSPGHYGKQDALEKHDQAIIKREAIEEERDADDEDDHDQDHDHEHDRDRDHDHDQVEDLSLARKERPESPYSPPQPRAASPMESASVIMHSASASTNGKEAHELEPEQEHENEHDNDRDHDHDHDHEMEEYNEAARSPALKRELLGSEEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00556620;
- 90% Identity
- iTF_00520556;
- 80% Identity
- iTF_00509180;