Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_035045625.1
Location
JAWNOW010000272.1:15750680-15762929[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.064 92 2.8 0.0 2 26 355 381 354 399 0.88
2 2 1.2e-18 1.7e-15 56.4 0.0 1 43 835 878 835 880 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATTGCAGAGCAACAGCccatatcaatatcaataacagaagcagaagccgaagccgaagccgaagccgaagagagcaacaactgcaaaccACTGAACCACCGTTTCGAGCAGCCCAACGGCCAAcattgccacagcaacaacaaccacagcaacaacagccacagcaacagcaacaccaacaacaacagcaacaacaacggcgcaCTGCAATTTGAAAGAGATTTTGAGAACAACCACACATCACACGACAACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCTTCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAACACCAAAGGCGAATTGGTGGCCGAAACAAcggcaagcaacaacaaccataacaacaacaaccacagcaacatcTACAACAACGGCACAGCTGTGTTGCTGcacgacagcgacagcaactcGAGCGCATCGCTGCACAACtgcagcagaaacaacaacaacaacaacaacactaggAACACTGTTAAGCATAGagcaagcaacagcaacaacaacaacaacgctgccacaacaacaacaagtggaACAGCGCCAGCTTCAAAAGAACTTTTCACGCTGCTGAGCCAGAATTTAGCCAAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCCCAATTCACAGTTCAGTTTGCCGACTTCAATTTGATCAGCACACTGgccaatcagcagcagcagcaacaacagcagcaacagctcgcTAATTTGGTAACGCCAACTACCTCAGATGCATCGGCAGCCGCCGCAAGTCCCACACTCAAAGATACGCCGAGCAGTCCCAGTGCAGATGCCCCTTTGGATCTAAGCAGCAAACCGTCGCCAAATTCATCCATTAGCGGCGACACAAAGCCAGCCAGACAAATCTTCGATTGCGGACCGCCGGTGTCGGCGTCGGCCTTGGGCAGACACAGCTACAGCCAGGAGGAGCTGAACAACGCGCTGCAGGATGTGGTGGCCAACAAGTCGCTGACGGGCAGTCGCAAGGCGCCCAGCCAATACCTTCTGCACCGCTCCATGCTGCGCAACAAGATGTGCAAAATGTCGCTGGAcacgaagcagcagcagcagcaacatcagcagctgcagcagcagctgaagctggaggAGCAAGAGGACTCGGGCGAGGAGGCGAACGATGCCGACAGCAACGGCTCCGGGGCAGCTTCGGGCTTCCAGGAGTACGCCCAACGGATGGCGGCCAGCAGCGAGCATCTGCGCAAGCTGAGCGGCATGTCCGAGCACAACGGCAGCGACCTGGGCGACGAGCTCGAGGCGGCCATGTCGCCcaagctgccacgcccccagaGCGGAGGTGcgcccacaacaacagcagccgcggCTGCCATTGACATGAATGTGCTGCTGCGCACGCTGATGTTGGCGGCGGGCATTGGAGTGATGCCCAAGCTGGACGAGACGCAGACGCTGGGCGATCTGGTCAAGTCGCTGGTGATGGCCAACAGCAGCGGGCTGATGAACGAGAGTCTGCTTAACGCCGTGGCTGCTGGCCACGAGAGCAACGGCGATCAGcgactgctgcagcagcatcatatgcaacagcagcagcaacagcagcagcagcagcaacaacagcagcagcagcagcaacagttggccGCTGTGGCCGCCTTTCGTCGTCATATACCAAAGTCTGAAACGCCAGAGACGAACTCCTCGCTGGACGCCAACGAGGTGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTGAGCGGCGCCGGCAACATatcgccgccgctgctgcagcactgcaacagcagcagcaacaacagcaacgccaaTGCGATCAGCAATCGCAACGGCGGCGATCACAGTCCGCACTCGGCCTCCCCGATGctggcagcagctgttgctgccgccgcagcGAACAACAGCTACCGGCAACAgaacagcggcggcagcagcagcggcagcaatctGCTGTCGCCCTCGCCCACATCCATACAGAAGATGATGGCCACGTCCATACAGCGCAAACTCAACGAGCAGAGCAGCCAGGACAGCCTGCTgcgcaacaacggcaacaccAGCGGCAGcgagtgcagcagcagcggcggcggcggtggcggcggcagcatTGCTGGCAACGGCAGTctgaacagcagcaacaactacaagaagCCGAGCATTTCGGTGGCCAAGATCATTGGCGGAACCGACACCTCGCGCTTCGGCGCCTCGCCCAACATGCTCGCCCAGCCCCATCACAGCCATCTGCCAGTGCATCACAGCCaccaccatcagcagcagcagcagcagcagcagcagctgagcgCTGCGGATGCGGCACTGGGCAAGGGCACGCGACCGAAGCGCGGCAAGTATCGCAACTACGATCGCGACAGTCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCATCGAGCCGGCAGCTACTACGGCGTGCCGCACTCGACGCTGGAGTACAAGGTGAAGGAGCGACACTTGATGCGGCCGAGGAAACGCGAACCGAAGCCGCAGCCGGATCTGGTGGGTCTGACGGGCGCTGCCAACAAGGTGAATCCGAATCTGGTCGGCCTCAATCATCTGGACAAGCTGAAGGCGGGCAACAGTGCGGCCAatagcggcggcggcggcggcaacagcaacaacaacagcagcagcagcggcagcgccgGTTCGAAGCTGAGCAATGCGCTgaagaacaacagcagcgctGCGGCGGCAGCCATGACGACGGCCGGCGCGAACGGCATAAATCTGGCATCGATGGCCCACCCGATGCCCTTTCAGTTCTGGACGGCACCGAACTCGGGCGCCAACTACAGCCTGGACTTCAACTGCAATCCCGATTTCCTGAGTCACCACGGCAACGTGCAGATGCACGCCTTGGACTATGCCGAGAACATGTACGACAACATCATACGCAAGTCGCTGAAGAGCGAGAACGACGCCAGCAAcctcagcaacatcagcaacgtcAGCAACAGTGGCAACGGCCATGCGCTGCTCGACCAGCTGCTGGTGAAGAAGACGCCGTTCACCAACAATCGCAGCAACGATTACAAtgcggcagcagctgttgccgccgttgccgcGGCCAccgcctgcagcagcagctcggaGGGCGTGAAGCGAGCGGGCAGCCCGATGGGCGCCTATGCGGATGTGAAGCGGGAGCGTCTCAGTCCCATGCGCAGCGCGGACAGCGCCAGCAGCGAGGAGGAGCACGAGCATGCGACCAgcaaaaaccacaacaacaacaacaataacaacaacaacaacaacagtgaccTGGcgcacaacaagaacaacagcagcagcaacggcaacagcaacagcaacaatggcaacggACGCAGCAGTCGCATGACGTCGCGGGACTCGGACACCGATGGCAGCAGTCTGAAGAGCGAGCAGTCGCACAGCTCCGCACAacttgccacagcagcagctgcagcagcggcagtggGCAACAAATTGATGGATCTcaatggcagcaacagtgTCAAATTCGAGCCGGAAGCTGTTGTGACGGCGCCAATCTCGCCCAGCAGTTCGATACTGCACGAGAAGCTGGCGCAGATCAAGGCCGAGCAGAGCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQDQLTRNQLNIAEQQPISISITEAEAEAEAEAEESNNCKPLNHRFEQPNGQHCHSNNNHSNNSHSNSNTNNNSNNNGALQFERDFENNHTSHDNDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNTKGELVAETTASNNNHNNNNHSNIYNNGTAVLLHDSDSNSSASLHNCSRNNNNNNNTRNTVKHRASNSNNNNNAATTTTSGTAPASKELFTLLSQNLAKMTSMESMAAKLAQFTVQFADFNLISTLANQQQQQQQQQQLANLVTPTTSDASAAAASPTLKDTPSSPSADAPLDLSSKPSPNSSISGDTKPARQIFDCGPPVSASALGRHSYSQEELNNALQDVVANKSLTGSRKAPSQYLLHRSMLRNKMCKMSLDTKQQQQQHQQLQQQLKLEEQEDSGEEANDADSNGSGAASGFQEYAQRMAASSEHLRKLSGMSEHNGSDLGDELEAAMSPKLPRPQSGGAPTTTAAAAAIDMNVLLRTLMLAAGIGVMPKLDETQTLGDLVKSLVMANSSGLMNESLLNAVAAGHESNGDQRLLQQHHMQQQQQQQQQQQQQQQQQQQLAAVAAFRRHIPKSETPETNSSLDANEVCEDPILKIPSFKVSGAGNISPPLLQHCNSSSNNSNANAISNRNGGDHSPHSASPMLAAAVAAAAANNSYRQQNSGGSSSGSNLLSPSPTSIQKMMATSIQRKLNEQSSQDSLLRNNGNTSGSECSSSGGGGGGGSIAGNGSLNSSNNYKKPSISVAKIIGGTDTSRFGASPNMLAQPHHSHLPVHHSHHHQQQQQQQQQLSAADAALGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNPNLVGLNHLDKLKAGNSAANSGGGGGNSNNNSSSSGSAGSKLSNALKNNSSAAAAAMTTAGANGINLASMAHPMPFQFWTAPNSGANYSLDFNCNPDFLSHHGNVQMHALDYAENMYDNIIRKSLKSENDASNLSNISNVSNSGNGHALLDQLLVKKTPFTNNRSNDYNAAAAVAAVAAATACSSSSEGVKRAGSPMGAYADVKRERLSPMRSADSASSEEEHEHATSKNHNNNNNNNNNNNSDLAHNKNNSSSNGNSNSNNGNGRSSRMTSRDSDTDGSSLKSEQSHSSAQLATAAAAAAAVGNKLMDLNGSNSVKFEPEAVVTAPISPSSSILHEKLAQIKAEQSEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00614109;
90% Identity
iTF_00520551; iTF_00614109;
80% Identity
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