Dfla014069.1
Basic Information
- Insect
- Drosophila flavopinicola
- Gene Symbol
- ZNF131
- Assembly
- GCA_035042425.1
- Location
- JAWNLL010000462.1:3228725-3245340[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.3 2.1e+02 2.7 2.4 3 23 316 338 314 338 0.92 2 14 1.4 89 3.9 1.9 3 22 488 507 486 510 0.90 3 14 0.73 45 4.8 0.2 2 23 532 554 531 554 0.93 4 14 0.2 12 6.6 0.9 1 23 571 594 571 594 0.95 5 14 3.8 2.4e+02 2.5 0.7 1 21 599 619 599 623 0.89 6 14 0.0013 0.08 13.5 0.2 2 23 685 707 684 707 0.96 7 14 0.13 8.1 7.1 0.1 1 21 712 732 712 733 0.92 8 14 0.0001 0.0064 16.9 2.2 2 23 793 813 792 813 0.97 9 14 0.00013 0.0078 16.6 0.7 1 23 819 842 819 842 0.96 10 14 0.00033 0.02 15.3 0.4 1 23 869 891 869 891 0.98 11 14 0.55 34 5.2 0.7 1 23 898 922 898 922 0.97 12 14 4.6 2.8e+02 2.3 6.2 1 23 927 951 927 951 0.95 13 14 0.0017 0.11 13.1 3.0 1 23 966 988 966 988 0.98 14 14 0.0006 0.037 14.5 3.4 1 20 994 1013 994 1015 0.95
Sequence Information
- Coding Sequence
- ATGAACCCCGAATCTGAGGATCTGGAGGACACGCATTTGTGCATCAAGTGCAATGCGACTATTGTGGGCCTGAGCAAGTACATTGAGCACCGTAAGCGCAATTGCCTAAGTAATTCCATTAGCAATGAGCATCCGACCAAGCAAGTGGTCActcctcgtcctcatcctccGACAACAACGTCGGCAGCATCAGTTGCTCCCAGCGATCACGTGTCGCCGCCTACGATTATGAGTCGCTCCAACCTGGAGCACAGCTACGATGGCTTCCACTTTACCGAGCCGGAGGCACCGAGCAGTTACCTGCGCAAGACCACAGCCAGTCATGGCGGCAAGTCCTCCAAGTCGCTGACGGAGTCCTACGATCCCACCTACGAGCTGGGCGCCGATCTGTTCTTCTcctcgctgcagctgcagagcGTCTCGACGGGTGGGAAGACGGGTGCACGGCCCGATCGTGGAGGAACCAAGGAGGAGGCCAGCTGGCActcggccagcagctgctcggaTCCGCTGCTGAAAGCGGTGCGGGAACACGAGGAGTCCGATTTCAAGCCACTCAAGTTCGTGCACTCGCCGGAGGccagcgaggaggaggaggaggatgacgaGCCCGATGACTTCGAGGGCGACGACGAGGAACACGAACACGAacatgatgctgatgctgatccTGATCCTGATGAGGATTACGATGCGCGTCGCCATTCGCCGCCAACGGTGCCCGCCACGCACACGGGCGGCAAATGGAAGCCGGAGCATCGtccgcagctgcagcacacgCATCTGGAGCGCATCTCGCCCAGCTGGGATGAGCCGGTGGAGGAGCCGCACGATCATCCGCCCGCGGAGCACACGCACGGCAAATGGGTGCCCGGCAGCAAGCAGCTGGAGTACCGCGAGAACATCGATCTGaccaagctgcagcagccgggCGCCAGCTACTGGTGCAACATCTGCTGTCGCCGCCTCAAGACGCGCCTCAACTACGAGCAGCATCTGCGCAGTGGCTACCATCTGAGACGCGCCGATGCCGAGCGTCAGCTGGAGCAGGCGACGCTCGCCGGCGCCAATCTGACGCTCACCAAGGACTTTCAGCAGTCgaagcagcagtcgcagcccCAGtcggagcaactgcagcatcaGCCAGAGCAGCGCcaacgtcgacgtcgtcgCGCCAATCTGCTGCGCTGCGAGCTGTGCCGGCACAGCATGGCTCGCCACCTCATGGGCAAGCATCTCATCTCCCACTATCACTATCGacgcctgcagcagcagccgactCAGCTGCGCCGGCAGAGCTCGCTGCACGACATCCTCGAGCACATGGGCAGCATTGTGCGACAGGCGCCATTCCAGTGTCTTCCCTGTCGATTCTATGCGAATACAGAGCAGGCGTTCCAGGCACACTGGCGCTCCTCGACGCACGTGGAGCTCACGGAGCGACTGGGTGGCCACTTCTGGTGCAGCTACTGCCAGTGCGAGTGTGCCAGCAACGAGGAGATGTGGCAACACTTGCTCTCCGCCACGCACTTGGAGGTGCTCTTTGCCATCAATCGCTCCGTGCCCGTTTGCATTGCCCAGCGTCGTCCGATCAGCTGCTCCGCTTGCAGCGCCAGCTTCCTGTACAATGCACAGCTGCGACGACACTTTGCCACGGAGCACGTGGAACTGGAGGCGACGGGCAGCGCTGCGGATGACTATCAGTGTCGCTTTCGCTGCGGACTGTGCGGTGTGGCGCAGAGATCACGAGTGGCCCTGCAGCGGCATGAGAAGCACAAGCATCGATTGGCCAAATACTATTGTGCCGTCTGTCGGCTGGAGTTCCAGACGCCGCTGGCGGCACGGCGCCATCGTAGCCACATGCAGCACAAGCGGCGCGCATGCCACCGGAAGACTAGAAGCAAAGTCCACAATCAGCCGGAGAGGGAGATTGAGCACATGCTGCGTGCAGTGCTGGAGGATCAGGCGGAGCAGACAGAGCCGACTGAGCCGACAGAGCAACCAGAGCAGCCAGCTGCGTCCAAGCGGCGACGGCTCGCCTCACCTCAAAGCCAATGCGATCGTTGTCCTTTGAGCTTTGAGACGCCACAGGCTTTGGTGCAGCATCGTCGCGAGTCGCATCCGATGGACAATCATGCCTGCCTCAGCTGCGGCGTCAGCTTTCAGTCCGCCCAAGCGCTGGGACGGCACACTCGCAGCTGCCAGCCCACAgcctccagctccagctccaactccgcAGCAGCCGTTGCTAGCGAATCCAAAACCAAATCCTTCAGCTGCGACAAGTGCAGCTTCAGCGCTCAGTATGAGTCGGATCTGCTCTACCACAGCTTCTTTCACACGCGCAGCTCGGTAATGGGCAAGAACGAGCTGCTCCAGTGTCCACTGTGTCCCAAACAGTTCCGCAAGCACTCGCTGCGAGCCCATCTGCGTAATCATACCAACGAGCGGATCTTCGAGTGTGCCGAGTGTGCCGCCAAGTTTGCCAGGAGACACAATCTCAAGAATCACATGGCCAGCATGCATGGCCAGCCCGATAAGAAGTCATCTGTAGAGAAGACCGCAACTGTGGAGCAGCAATCGAAGGCTGTTCCCAAGCAGAAATATCAATGTGGCACCTGCGGCAAAATACTGGCTAAGAAATACTCACTGAAACTGCACGAAATGAGCCACTCGGAGTTGGAGCGTCAGTATCGTTGCCACTATAAGGATTGTCAGTATGCGGGTCTCACTCCGGAGGCACTCAAGACCCATCTCATTTCGCATGCCAAAGGAAGTCACAAATGCGAACACGACAGCTGCCGATATGTGGGCAAAAGTGAGCTGCATTTGAAGAGGCATCTCAAGTCGCATGTGAGCCAACAGGAGCCAGCTGAGGGCGGCAATGGCAATTGGTACTCGTGCGATCAGTGCGAGTTCAGGGCCCGGATCAAGGGACATCTGAGGCGGCACATGCGTCGCCACACCGGCGAGAAGCCGCATCAGTGTCCCCACTGCGACTTCCAGTGCAGCAGCCTGGACAACCTGCGCAAACACATCGTCAAGACGGGCAAGCATCCTGGCAAGTTCATCTACGAGTGCGCGTCCTGTGCCTTCAAGAGCAACAGCTTCAAGGACTACCACATACACTTGGCCACACATAAAAGCTAA
- Protein Sequence
- MNPESEDLEDTHLCIKCNATIVGLSKYIEHRKRNCLSNSISNEHPTKQVVTPRPHPPTTTSAASVAPSDHVSPPTIMSRSNLEHSYDGFHFTEPEAPSSYLRKTTASHGGKSSKSLTESYDPTYELGADLFFSSLQLQSVSTGGKTGARPDRGGTKEEASWHSASSCSDPLLKAVREHEESDFKPLKFVHSPEASEEEEEDDEPDDFEGDDEEHEHEHDADADPDPDEDYDARRHSPPTVPATHTGGKWKPEHRPQLQHTHLERISPSWDEPVEEPHDHPPAEHTHGKWVPGSKQLEYRENIDLTKLQQPGASYWCNICCRRLKTRLNYEQHLRSGYHLRRADAERQLEQATLAGANLTLTKDFQQSKQQSQPQSEQLQHQPEQRQRRRRRANLLRCELCRHSMARHLMGKHLISHYHYRRLQQQPTQLRRQSSLHDILEHMGSIVRQAPFQCLPCRFYANTEQAFQAHWRSSTHVELTERLGGHFWCSYCQCECASNEEMWQHLLSATHLEVLFAINRSVPVCIAQRRPISCSACSASFLYNAQLRRHFATEHVELEATGSAADDYQCRFRCGLCGVAQRSRVALQRHEKHKHRLAKYYCAVCRLEFQTPLAARRHRSHMQHKRRACHRKTRSKVHNQPEREIEHMLRAVLEDQAEQTEPTEPTEQPEQPAASKRRRLASPQSQCDRCPLSFETPQALVQHRRESHPMDNHACLSCGVSFQSAQALGRHTRSCQPTASSSSSNSAAAVASESKTKSFSCDKCSFSAQYESDLLYHSFFHTRSSVMGKNELLQCPLCPKQFRKHSLRAHLRNHTNERIFECAECAAKFARRHNLKNHMASMHGQPDKKSSVEKTATVEQQSKAVPKQKYQCGTCGKILAKKYSLKLHEMSHSELERQYRCHYKDCQYAGLTPEALKTHLISHAKGSHKCEHDSCRYVGKSELHLKRHLKSHVSQQEPAEGGNGNWYSCDQCEFRARIKGHLRRHMRRHTGEKPHQCPHCDFQCSSLDNLRKHIVKTGKHPGKFIYECASCAFKSNSFKDYHIHLATHKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -