Dfla001841.1
Basic Information
- Insect
- Drosophila flavopinicola
- Gene Symbol
- retn_1
- Assembly
- GCA_035042425.1
- Location
- JAWNLL010000090.1:9745087-9748888[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-17 1.8e-13 50.7 0.1 29 89 4 62 1 62 0.93 2 2 3.6 8.2e+03 -2.7 1.2 21 39 230 253 197 268 0.54
Sequence Information
- Coding Sequence
- ATGGCCAAATCGGTGCTGGATCTATATGAGCTATACAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTTATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTGCGCACCCAATACATGAAGTATTTGTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAACTGCAGGCGGCCATCGATGGCAATCGGCGCGAAGGACGTCGCTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGTCGTCCATTTCGCGACCATCTCTGCCTGGTGGCATGCAACAAATGTCGCCACTGGCGCTGGTCACACACGCGGCAGCCGCCAGCAATCAGCAGGCgcaggcggcggcagctgctgctgcagcacatcGTCGTCTGATGGGCGGGCCGGCTTTCGGCCAGATGCCGAATCTGGTCACGCAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCaagaaggagcagcagagTGCGCCAGTCCTGGGCGCCACACAtccccaccagcagcagcagcagcagcagcagcagcaacagtcgctgcACCttcaccagcaacaacaacaacaacagcagcaacaacagcagcagcagcagcagcagcgacagcgctCCCAAAGTCCCGAGCTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCCTAAACCTCTCCGACTCGCCGCCAACTTTGAATTTGAATCACATAAAACGCGAACGGGAACGCGATCCAACGCCGGAGCCGGCGGACCACGAGGATCAGCCGCATCAGCCGCCGCCAGCGAAGCGTGTGGGCAGCGGTCTAATGCCGCCCGGTTTTCCCGCCAACTTCTACTTGAATCCACACAACATGGCCGcggtggcagctgctgccggctTTCATCATCAGGCGGCAAACAATcatcaccatcagcagcaacagcagcagcagcaacagcagcagcagcaacagcagcaggatgcAGCATCCGATGGCGAGCCAGAGGATGACTTTGGACGACAGCGAGCCACAGCAGCTAAATGGAcaccaccaccatcatcatcatcacgaGCACGATCACGATCAGGATCACGAGCacgatcatcatcatcgcagTCACCATCAGAACCATCATCTGACAAATCGGATGACTCGGCCATTGAGAACTCGCCCAGcacatcgacaacaacaacaacaacaacaacggcatcGCAACGCCACAGCTCACCGGTGTCGACCAAGAAGAAGAGTGGCGcgaacagcggcaacaacaagacACAGCAGCAGTCCTGCGGCACCAAGGATGCCCCGCAGcaggacaacagcagcgacagcgtcAAGCTGAACGCCCTCGAGACGCTCAGCCTGCTCTCGGGCCTGCAGTTTCAAGTGGCACGCAATGGCACCAATGCCAGTGGCGAACAGCAGCTGATGGTCAATCTCGAGCTGAATGGCATCAAGTACTCGGGTGTGCTCGTCGCAAGCAATGCAGCCCAGTCCAGTTCAGCAGCAGGACACAAAGAGGATGCAGTTGCTGCTATCGATGATGCGGCTGCtatcgatgctgctgctgctgctgctgctgagatGCTGCTGCCAGCAAGGAGCAGCGAGCAGGACCTAAGCACTGTGCTCAAGCATGAGAACAGCCAGGAACTCGGCCAGAACGAGGCAATTGACGAGGAaacaacgcagcagcagcactcagAGGACATTGTGAatggagtgggagtgggaatgGGAGTGGGTACAGGAGTGGGTGGGGGAGTGGGCGTTATTGCTGCCAGCCTGCTCAAGGATGCTGTGGCCAGTTCGTAG
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLSSISRPSLPGGMQQMSPLALVTHAAAASNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQSAPVLGATHPHQQQQQQQQQQQSLHLHQQQQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADHEDQPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQQQQQQQQQQQQDAASDGEPEDDFGRQRATAAKWTPPPSSSSRARSRSGSRARSSSSQSPSEPSSDKSDDSAIENSPSTSTTTTTTTTASQRHSSPVSTKKKSGANSGNNKTQQQSCGTKDAPQQDNSSDSVKLNALETLSLLSGLQFQVARNGTNASGEQQLMVNLELNGIKYSGVLVASNAAQSSSAAGHKEDAVAAIDDAAAIDAAAAAAAEMLLPARSSEQDLSTVLKHENSQELGQNEAIDEETTQQQHSEDIVNGVGVGMGVGTGVGGGVGVIAASLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -