Dfic007106.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- pnr
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000775.1:10188637-10196665[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 5.5e+03 -3.1 0.2 4 11 3 10 3 10 0.90 2 3 0.047 1.5e+02 1.9 1.0 1 26 287 306 287 313 0.74 3 3 1.5e-17 5e-14 51.5 7.7 1 34 338 370 338 372 0.97
Sequence Information
- Coding Sequence
- ATGGTCTGCAAAACTATCTCGACGAGTCTGAAAATGCAGCTGAAGGCGGGCGTCAGCGAACCCGAGGAGCAGTACGTGGTGGTGCCGCGCATCCAGCGCCGCATCCTCACCACAGCGGGCACACTTGAACTAAACGAAGCTCGTGAGGGAGAGCCGAGTACGAACGCCAGCAGCGCCAGCTCCGGATCCGCTCCGGACAGCCACATCGAGTACCAGCAGCGGAGTGCGCACCACTCGCCGGGAGCCACCCACTACGTGCAGATGGCGCCGCGCACCGCGGAGGTGGCGGAGCAGGTGGCAACCGCCGCCGGAGGAGCTCCACCTGGCACCATCTACGCCTATCCCTCGGGACAGATCATCTGCAGTGGCGAGGATAGCTCCGCCTCGAATCTGTACTACGATGCACCGGTGGTGGATGGAAGTGTCCATGCCAATGAATCGAAGACGTACGCTGATTTGGGCAACGCCTACTCCCCCTTCCCGCCCAGCTCCAGTTTCAGCAGCAACAGCTACGCGGCCACCTTGCAGCAGGGCAACACCATCTACAGTGTGCCGGGCACCGGGCAGTTCCTGGCCAAGACGGAGTCCGGGTTGAACCAGTTGCGTCAGGCGGGACCGGCCACCTTCCAGACGATCGCCTTCAACGACGGCAACAACGCCATCGAGGCTCTGTGGACCTCCAATGCTCCTCCGGAGTACCAGAATGTTCCCTTCGGCAACTTCCACCCGCAGGTGATCGACGAGTACCCCAACGGGAACATGACCACCACCCACTGGTCTCCAGCGGCGAGCATCGCCCAGTACGACGGCAGTTTGGTGACAGCCTCCTCCACGTCGTCGCCGGGACACGAGCTCAAGTGCGAGAACTGCCACTCCCCGTTGATGCGGAAGGGGGCGGAGTACTTCTGCACCAACTGCCCACCGTTTATGCGGATGGCGCCACGCATGCCTCCTCGGCAGTCGAAGCCCAAGGCCGCCGCCGCCCCCAACAACCGGCGAAATGGAGTCACCTGCGCCAACTGCCAGACCAACTCGACAACCCTGTGGCGGCGCAACAACGAGGGCAACCCTGTGTGCAACGCCTGCGGACTCTACTACAAGCTCCACAACATGAACCGTCCACTTTCGATGAAGAAGGAGGGCATCCAGAAGCGAAAGCGCAAGCCCAAGAACAACGGAGGAGCGCCAATGCACCGAGCTCCGCTGCCAAGCATGTCCCAAGGCGTGAACCTGATGGCCAACAGTCCGCTGTATCCCTCGCAAGTGCCGGTGAGCATGCTGAACAGCCAGCAGAACGCCAGTCCGGAGCTGCACGACATGTCGACGACGGGACCGGCGGGGGTGCCCCGAGTGGTGGCCATACCGCTGAGTGCGACGGTGCCGCCCACCTCCGACGGAACGCTCAACATGTCCGCTCGCCACCACGTGACCAGTGAGAGCCACTCGCCCTACAGTCAGCAGTCCACTCCGCAAAGTCAGTCGCCACATCTGCCCAGTTCGGTGGCCATTAACCGCCAGATAGTTCAACCAGTACCCACGATCGAAAGCGGTCGCAGTTCGAACAGCGAACTCACACCCAGCGTCATCACACGCACTGGTCTGCCAGAGCGATCATCGAATAACTAA
- Protein Sequence
- MVCKTISTSLKMQLKAGVSEPEEQYVVVPRIQRRILTTAGTLELNEAREGEPSTNASSASSGSAPDSHIEYQQRSAHHSPGATHYVQMAPRTAEVAEQVATAAGGAPPGTIYAYPSGQIICSGEDSSASNLYYDAPVVDGSVHANESKTYADLGNAYSPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKTESGLNQLRQAGPATFQTIAFNDGNNAIEALWTSNAPPEYQNVPFGNFHPQVIDEYPNGNMTTTHWSPAASIAQYDGSLVTASSTSSPGHELKCENCHSPLMRKGAEYFCTNCPPFMRMAPRMPPRQSKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQQNASPELHDMSTTGPAGVPRVVAIPLSATVPPTSDGTLNMSARHHVTSESHSPYSQQSTPQSQSPHLPSSVAINRQIVQPVPTIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541443;
- 90% Identity
- -
- 80% Identity
- -