Basic Information

Insect: Drosophila ficusphila
Gene Symbol: -
Assembly: GCA_018152265.1
Location: JAECXK010000106.1:5275743-5287146[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00075 0.053 13.8 0.6 2 23 282 304 281 304 0.94

2 10 0.012 0.84 10.1 4.6 2 23 420 442 420 442 0.91

3 10 0.0058 0.42 11.0 2.3 3 23 519 540 517 540 0.94

4 10 0.36 25 5.4 2.7 1 19 642 660 642 665 0.93

5 10 0.014 0.97 9.9 0.2 2 23 776 798 775 798 0.96

6 10 0.0016 0.11 12.8 0.2 2 23 844 866 843 866 0.92

7 10 0.0092 0.65 10.4 3.6 2 23 919 941 918 941 0.96

8 10 0.09 6.4 7.3 4.2 2 23 955 977 954 977 0.92

9 10 0.0018 0.13 12.6 0.7 2 23 1038 1060 1038 1060 0.95

10 10 0.042 3 8.4 0.6 1 23 1157 1179 1157 1179 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00075	0.053	13.8	0.6	2	23	282	304	281	304	0.94
2	10	0.012	0.84	10.1	4.6	2	23	420	442	420	442	0.91
3	10	0.0058	0.42	11.0	2.3	3	23	519	540	517	540	0.94
4	10	0.36	25	5.4	2.7	1	19	642	660	642	665	0.93
5	10	0.014	0.97	9.9	0.2	2	23	776	798	775	798	0.96
6	10	0.0016	0.11	12.8	0.2	2	23	844	866	843	866	0.92
7	10	0.0092	0.65	10.4	3.6	2	23	919	941	918	941	0.96
8	10	0.09	6.4	7.3	4.2	2	23	955	977	954	977	0.92
9	10	0.0018	0.13	12.6	0.7	2	23	1038	1060	1038	1060	0.95
10	10	0.042	3	8.4	0.6	1	23	1157	1179	1157	1179	0.99

Sequence Information

Coding Sequence: ATGATAATATCATCCAAAATGGCTGCATCCATATATGCCACCCCACCGCCAGATCTGAGCAGCGAGGACACTGCTCTCTCCGACGTCTCCAACTCATCGACACTCAACACGAACCGGAACAACCACAACCACAGTAGCAGTCACAACCACAGCCACACGAGCGGCAGCCACAGCAACAGCAGCAGCAACAATCCCCATGAAGCCGCAGGAGCAACACCCACAGCCACGACGGCCGCGTCCCGAGGAGCAACAGGAGTGGAAATGGGAGGCAACTCCCCCACCACCGCCCACTTGGTCAATGCAATGGAGCTGGAACTGGAGCCCAAGACGAAGACGAAGCCAGCGGGAAGCGGCACAAATGAGGCCATGGAGCAGGAGGCAGAGGAGCAGGAGGCAAGGGCCAAGGACGCGGAGGAGGCGGAGGACGTTGGCGATGCCAACATGGCCACAATGGCGGCAGCCATGCAGCTGCAGCTCCTCGAGGCTCTGAGCGATGCGGCCAAGAAGCGGCGCAAGCAGCACAATCCCAGTCGCCTGGAGGCCCTCAACTTGAGTGGAGAGCCGAGTGGCGAAGCAGTGGGTGGTGGTCAGAGGAGGGCCGACTCCTCCACCGAGGACTACGAGGACAAGTTGTCCAAGATGTTTCTGCCCAAGTCCATTGAGCAGCTGAAGGAGACCTTCGAGATGCTGCAGTATCAGCAGAAACAGCAGCAGCAGGAGGAGCATACCGAACCGGAAGCGGAAATGGAAAGGGATAGGGAGGCAGTAGCGGAAGCGGAAACGGAAGCCATGACACCAGACATATCAGAGGGCGGCAAGCAGCGCGAGAATCCCTACCACACCTACTGCAAGCAGTGCGGCGAGAGCTTCGAAACGGAGTTCAAGTTGAGCCTGCACATGTTGCAGGATCATGGGGAGGAGCGATCCGGAGAACAGGATCCCGCCGACTTCCTGGCCTCCATCAAGGTGAAGCTGGAGCGAGCCGAGATCCCCAGTCCGCAGCAGGAGCACCACATGCAGCAGGAGCTGACGAATGGCCACGGCAAGGATGTGGAGCGGGAGCAGGAGCAGGAGCACTGGTTCCAGGCCATGCAGGCCCAGCACCATCCGCACGGCCCCCAAATGCCGCCCGCCTTTCCCTTTCCCCCGGAGGCGGCACTCGGTCCAGCTGGCTACCTGCCACTGCTCGGGATGTCCGGATTCCCGGGCGTCGATGGCCTCAATCGTCCGCCGCTGAGGATCTTCAATCCGGAGGCCTACTGCGAGCTGTGCAACAAGGAGTTCTGCAACAAGTACTTCCTCAAAACGCACAAGGCCAACAAGCACGGCATCTTCGATCCCGTTGGCGAGTCCAACAACTCGACCAACACTTCCAGCCACCACAACAACAACAATAACAACAACATCACCAGTAGCAACAACAACACCGGTGGTCATCCCAATCCCGGTATGAGTTCCATGGGTCAGATGTTCCAATTGCAGAGGGAGGCTCAAGTGGCGAAACAGGATGTAAGTCAAGGTGGGGGATCATCCAATCCCGTGGCCTCGGTGCACTGTGACATCTGCTCGAAGCGCTTCACCAACATCTTCGCCATGCGACGCCATCGGGCCAAGCAGCATGATGCCCAGCCAGGATCGCAGGACTCGCCCAACTCCCAGACAGCCATGCAGTCGCAATCCTTGAGGGGAAGTCCCAATGAGCAGCCGGTGCAGCCAGCAACCATCAAGCAGGAAATGCCGCAGGAGTCGGAGGTTAAGCCCTATCAATTGCCCGAGGGATTCCGCGAGGACTTCACCCTGGAGCAGGAGGAGCTGAGCTTCGTGCCGCCACCCCGGAAACTACCATCGCATCTCCACCAGCAGGCGAAGGACTCCAACTTCAATGCGGAGAAGCTGCGTCGCTTGGGCGTCCAGTTCCCCGAGTTCTTCTGCGAACTCTGCTTCAAGGAGTACGCCAATCGGTACTTCCTGCGCACCCACAAGTGGAAGCGGCACGGCCTCTTCGTGCCACCCGAAGAAGTGACCCCCCAGCCGGGTGGCAAGGACGAGGCCCAGATGCCCAGTGCCTGGCCCTTCATGCCACTCAATCTGATGCTGGCCAAGGCAGCGGCAGCCACTTTGGATCAGCAGGATCAGGAACGCGAACCGGAAACGGAAACCGAGGCAGAACAACCGAGCAAGAGGATCAAACTGGAGCAGGAACAGACTCCGCCGGAAAACTACGACGAGGAGAAGCTGAATGGATCGGTGGTCGGTCTGCAGAACCTGCAGAAGCTGCAGTCCATGTTGCAGCAGCTGAACGACATCAACGGCAAGCGACCGCTGCCCTGTCACCTTTGTGGCCAGGAGCAGGAGAACCAGTACGCCTTGCGGGCTCACCTGATGACCGAGCACGCTGGCCAGATGCAGCTGCCCATGCCCATTCCCATGCCCCTGCCCGACCAGCAGGCGCCGCATCCCATGGTGGGTCTGTATCCCCAAACGCCGCCCACCTCGGGTGCCCGATCCCCGCCAGGCGTCGCTGATCTCCGCTGCCAGCAGTGCGATCGGGACTTCGCCAGCGCCCAGGAATTCAAGCAACATATCGCCGAGGTGCACATGGGCAGGAACGGAGTACCACTCGGTGGCAGTCCGCTGCGCGAGGGCTTCTTCACCCCCGAACGACCGGTGGCGCCCCCGGCAGGAGCAGCAGGCAATCCAGGGGGGAATCCGCCGGGAAACAGACCAGCCTACACGCTCACCCCGACCAGCAGCTACTGCGAGATCTGCAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACGCACATGCAGCGGATGCACGGCATCGAGATCGAGAACGGGGCACAGATCGGAGGCGTCGTGTGCAACATCTGCAACAAGGAGCTGTGCAGCAAGTACTTCCTGCGGGTGCACAAGCACAACACACACGGCATCATCGAGGAGGGATCTCCTTTACCGCAGCCAAGGGGTCAAAATGGGGTCAAGATGGAGGCAGCTGCCGCAGCAGCAGCCGCAGTGGCAGCAGCCACGCCGCAGCAGGATCAGGAGCTGAATGTTTCCCCCACCACAGTGGAGGGTAGCTCCTCCACTGGCGGATCCAACCACGAGGTGTGCCCCTTGTGCTCGCGACAGTTCCGCAGCTTCAAGTGGCTGCGATCGCATCTGATGAACGAACACGGATCCGCGGGAGTGGAACGCCTGCGGGAGATGGACACCACTGGCTCCTCCACGCGCAGCAAGCCGAACAGTCCCACGCTCAAGATTCCCAACGGAAGTGGCAGCAATCCCTCTGCAGCAGCAGCAGCAGCAGGAGCTGGAAACTCCGCTCCCAATCTCGCCCAGGCGCTGCAGAACCTCAATGCCCAGCACCTCTTTGGTCAGATGCAACAGCAGCAGCAGATGCCCAAGATGCCACCACTACCCATTCCTGGGATGTTCGGAGAGCAAGCTGGCAGGTTCAAGGAGTACCAGTGCTCACTGTGCCCCTTCACCACGCCCTACTACGCCTTCCTCTTCATCCACGAGCGTTCCCACGCCCTGCTGAACAACGGAGGCGAGGCTATGGAGCTGCCCGTGGAGCCGCCGGCACCGCCAATCTCCGCCAGAAACCCGGGCAAGTCCCGCAGCAAGTCCAGCAAGTCAGCGGTGGTTGCACCACTTGCTCCCGTGAAATCCGAGGAGCCCGAAGCTCCCTTGGAGCCCACCAACCTCAGCACCTCGGCACCCAAAGTGGCGGCTCATTCCCCCATCGGCGGGAGCAGGATCTCCTCCTGCTTACTCCACCAAAGCAACCAGCTCAACTTCCCCGAAGATCCAACGCCGCCGCTCCTCCTCGAAGCCCCCAACTACGCCGAACGGATTGGGCAGTGGCGGCGGAACCCTCCACCGATCGGCGGCCACTTCGCCGTTCGAGGGATGCGGCGAGTTGGCCAACGGAAGCGGCAAGCCCGCCAGCTACGCGCAACCGGACCGAACGGAGGAGGCATATCAGATGCAGGCCTTCCACCTGCAGCCCGCCGATCCGGACTCCGAGATGCAGTTCGCCCCGGCCCTCGTCTACCTGCCCGTCCGGGTGAGGGCCTCCGAGTCGGCCACGCTCAGCTTCCGGCTCACACCGGCCTAAAGGTGCCACATGCAACAGGTTACAGTGTTGCCAGCGTAAGTTCAAGCCATAGAAAAACCAAATGCAACCCTGGAAAATATAGGGGATTGGGATACTTAAAAGATAATTTCAGGCTATCAATTGATCTCTTTGGTGCCAGCTAA
Protein Sequence: MIISSKMAASIYATPPPDLSSEDTALSDVSNSSTLNTNRNNHNHSSSHNHSHTSGSHSNSSSNNPHEAAGATPTATTAASRGATGVEMGGNSPTTAHLVNAMELELEPKTKTKPAGSGTNEAMEQEAEEQEARAKDAEEAEDVGDANMATMAAAMQLQLLEALSDAAKKRRKQHNPSRLEALNLSGEPSGEAVGGGQRRADSSTEDYEDKLSKMFLPKSIEQLKETFEMLQYQQKQQQQEEHTEPEAEMERDREAVAEAETEAMTPDISEGGKQRENPYHTYCKQCGESFETEFKLSLHMLQDHGEERSGEQDPADFLASIKVKLERAEIPSPQQEHHMQQELTNGHGKDVEREQEQEHWFQAMQAQHHPHGPQMPPAFPFPPEAALGPAGYLPLLGMSGFPGVDGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPVGESNNSTNTSSHHNNNNNNNITSSNNNTGGHPNPGMSSMGQMFQLQREAQVAKQDVSQGGGSSNPVASVHCDICSKRFTNIFAMRRHRAKQHDAQPGSQDSPNSQTAMQSQSLRGSPNEQPVQPATIKQEMPQESEVKPYQLPEGFREDFTLEQEELSFVPPPRKLPSHLHQQAKDSNFNAEKLRRLGVQFPEFFCELCFKEYANRYFLRTHKWKRHGLFVPPEEVTPQPGGKDEAQMPSAWPFMPLNLMLAKAAAATLDQQDQEREPETETEAEQPSKRIKLEQEQTPPENYDEEKLNGSVVGLQNLQKLQSMLQQLNDINGKRPLPCHLCGQEQENQYALRAHLMTEHAGQMQLPMPIPMPLPDQQAPHPMVGLYPQTPPTSGARSPPGVADLRCQQCDRDFASAQEFKQHIAEVHMGRNGVPLGGSPLREGFFTPERPVAPPAGAAGNPGGNPPGNRPAYTLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIIEEGSPLPQPRGQNGVKMEAAAAAAAAVAAATPQQDQELNVSPTTVEGSSSTGGSNHEVCPLCSRQFRSFKWLRSHLMNEHGSAGVERLREMDTTGSSTRSKPNSPTLKIPNGSGSNPSAAAAAAGAGNSAPNLAQALQNLNAQHLFGQMQQQQQMPKMPPLPIPGMFGEQAGRFKEYQCSLCPFTTPYYAFLFIHERSHALLNNGGEAMELPVEPPAPPISARNPGKSRSKSSKSAVVAPLAPVKSEEPEAPLEPTNLSTSAPKVAAHSPIGGSRISSCLLHQSNQLNFPEDPTPPLLLEAPNYAERIGQWRRNPPPIGGHFAVRGMRRVGQRKRQARQLRATGPNGGGISDAGLPPAARRSGLRDAVRPGPRLPARPGEGLRVGHAQLPAHTGLKVPHATGYSVASVSSSHRKTKCNPGKYRGLGYLKDNFRLSIDLFGAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512293;
90% Identity: -
80% Identity: -