Basic Information

Insect: Drosophila ficusphila
Gene Symbol: RREB1
Assembly: GCA_018152265.1
Location: JAECXK010000196.1:8802600-8809425[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.026 1.9 9.0 0.8 1 21 186 206 186 208 0.93

2 12 0.0026 0.19 12.1 0.1 1 20 218 237 218 239 0.95

3 12 5.5 3.9e+02 1.7 0.1 2 23 335 358 334 358 0.79

4 12 0.0065 0.46 10.9 0.1 1 23 509 531 509 531 0.97

5 12 9.1e-06 0.00064 19.9 0.7 1 23 541 563 541 563 0.99

6 12 0.00061 0.043 14.1 2.0 1 23 569 592 569 592 0.97

7 12 0.0022 0.16 12.4 2.0 1 23 874 897 874 897 0.95

8 12 6.4e-05 0.0045 17.2 0.3 2 23 1273 1294 1272 1294 0.97

9 12 0.11 7.6 7.1 6.3 1 23 1300 1323 1300 1323 0.97

10 12 0.61 43 4.7 2.8 1 23 1394 1417 1394 1417 0.95

11 12 0.0062 0.44 11.0 0.5 3 23 1477 1497 1475 1497 0.96

12 12 0.0049 0.35 11.3 5.7 1 23 1503 1525 1503 1525 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.026	1.9	9.0	0.8	1	21	186	206	186	208	0.93
2	12	0.0026	0.19	12.1	0.1	1	20	218	237	218	239	0.95
3	12	5.5	3.9e+02	1.7	0.1	2	23	335	358	334	358	0.79
4	12	0.0065	0.46	10.9	0.1	1	23	509	531	509	531	0.97
5	12	9.1e-06	0.00064	19.9	0.7	1	23	541	563	541	563	0.99
6	12	0.00061	0.043	14.1	2.0	1	23	569	592	569	592	0.97
7	12	0.0022	0.16	12.4	2.0	1	23	874	897	874	897	0.95
8	12	6.4e-05	0.0045	17.2	0.3	2	23	1273	1294	1272	1294	0.97
9	12	0.11	7.6	7.1	6.3	1	23	1300	1323	1300	1323	0.97
10	12	0.61	43	4.7	2.8	1	23	1394	1417	1394	1417	0.95
11	12	0.0062	0.44	11.0	0.5	3	23	1477	1497	1475	1497	0.96
12	12	0.0049	0.35	11.3	5.7	1	23	1503	1525	1503	1525	0.99

Sequence Information

Coding Sequence: ATGCTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTCCACCACATCGGAGTCCTCGTTGGAGCACCTGGAACTGGGACGCACACCCAAGAAGCTGGGCGGCAATGGCACCACCACCCAAACCACATCCACGCCACACGAATTGGCGGCGACATCGCGCAAGCGCAAATTGCGTCAACTGCAGCAGCAGATGAATCACCACCAGGATTTGCTCAGCGACGAGGAGGATGAGGAAGAGGAGGAGGACGAGGAGGTGTCCCGCAATCTGGGCAGGCTGCACAAGCAGCGAAGGGGTGGTGGTGGTGCTGCTAATGCCACCCAGGCCTCCATTGTGGTTGACTACAGCAGTGGCGATGCCAGTTCGCTGCGCAAGAAGTTCCGACTCAATCGCTCAGCGGCGGCCAGTCTCTCGGAATCGGGATTCGGACTGAGCCTCTCCAGCGGCGAATCGGGAATCGGAGCTGGGGATGAGCACATGAAGTACCTCTGCCCCATTTGCGAGGTGGTCTCGGCCACGCCCCACGAATTCACCAACCACATCCGATGCCACAATTACGCCAACGGCGATACCGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGCTCTCGTCGGCATCCTCGCTGGACAGACACGTGCTGCTGGAGGATCAGCTGGACGAGGTGGATGCAGTGGAGAGCAAGCAGAGGCGTCTCAAGAAGACGACCATCAACAATAATATAATTGATGCATCGGAGCAGCCGGAGGAGATCGACGAAATGGAGGATGAGATGGAGGAGCAGGAGGAGGAGGATGCAGATGCGGATGCGGATGTGGCCATGCTGACCAGCACACCGGATGTGGCCACTTTGCTGGCTGGAGCCAGTGCCTCCGGAGCGGGCTCGCGATCCGTTTCGCCATCGCCATCGGAATCGAATAGTTTGCTCCTGAGTTGTCCGGTCTGCGGAGCCTCCGAGTTCGAAACGCTGCCCGCCTTGTGCGCCCACCTGGATGCCAGCCACTCGGACATCCCCGCCAAGTGCCGCGACTGCGAGGTGATCTTCGCCAGCCACCGCCAGGTGCAGGCGCACTGCTGCCGCGGATCCGCCGCCTCGATGGGAATGGGCAGTGGCGAGGATGGGGAGGAGGAGGATGAGGAGGAGCTGCTCGATCGGAAGGAGCGACTGCATCACCAGAGCGAGGACTTCTTCCACCAGCTGTACCTCAAGCAGAAGATGCCCATCTCGCATCCCCCTTCACCGATCAAACACGAACCGGCGGACAGCAAGGATTTGGCGGACATCCAGAGCATCCTCAACATGACCAGCTCCAGTTCCAGTTTCCTGCGCAACTTCGAGCAGTCGGTGAACACACCCAGCTCCAGTCAGTACAGCCTGGATGGTCGCGACCAGGAGGAGGAGGCCCAGGACGCCTTCACCTCGGAGTTCCGCCGGATGAAGCTGCGCGGCGAGTTCCCCTGCAAACTCTGCTCGGCGGTCTTTCCCAATCTGCGCGCCCTCAAGGGTCACAACCGGGTGCACCTGGGTGCAGTGGGTCCGGCGGGACCCTTCCGCTGCAACATGTGTCCCTATGCGGTGTGCGACAAGGCGGCTCTGGTGCGGCACATGCGCACCCACAACGGAGATCGCCCGTATGAGTGCGCCGTCTGCAACTACGCCTTCACCACGAAGGCGAACTGCGAGCGGCATCTGAGGAACCGGCATGGGAAGACCAGTCGCGAGGAGGTGAAGCGTGCGATTGTCTACCATCCCGCCGAGGATGCTGGCTGTGAGGATAGCAAGTCCCGCCTGGGCGAGGATCTCGCCGATCTGAGCTTCCGCTCGATCAGTCCCACTCCTCCTCCGCCTCCGACTGCCATCAATGATTCCAGCAGCTCCCAGCTGAAGCACATGCTCCTCGGCGAGAACTTAAATCCGGTTAACCAGCAGCCACAGCAGCCTCCGCTGAAGATCCAGGTGAAGAGCCTGGACCAACTGGTGGACAAGAAGCCAACTAGCAACCATTCAACGGATAAATCCTCCGCTGCCCTGGACTTCAGCATGGATGTGCTGGATCTCAGCAAGAAACCCAATGGAGGTGGAGCTGCTGCCGCTGCCACGCCCTCCGTGACGCCCTCGGCGAGTCCCTCGATGGGCATTCCCGCTGCCGCGGCAGCAGTTACTCCTGGTGGTGGTGTAACCACTCCGGATTTGGCCGCCGCCTTGGAGCAGCAGAAGTTGCTCCTCGCCCAGCAGCAGTTCTTTGGCGCTGGCGGAGATGCCGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGATGTTCCAGTCGCAGACGCCAGGGTTTCCCTTCTTCCCCTTCATGGCGCCACCACCGCCTCCACCTCCGCCACAGCAGCAGCAGTCGGGAGCGGAGAAGACTCCTTTGGTGAGTCCGCCCAACCGCTTGAATCCTTTACCCATCAATGTGGGTGTTCCCGTGCCACCTGGCGGACCCGTGAAGATGGTGATCAAGAACGGAGTGCTCATGCCGAAGCAGAAGCAGCGACGCTACCGCACCGAACGACCCTTCGCCTGCGAGCACTGCTCGGCGAGATTCACGCTCCGCTCGAACATGGAGCGCCACGTGAAGCAGCAGCATCCGCAGTTCTACGCCCAGCGGCAGCGGAGTGGCCACCACGTGATGCGCGGCCGGGGTGCCTCCTCCGCCTCCTCCACCAGTGCGGCAGTGGCCGCTGCAGCGGCAGCCATGAACCAGGGCGGCATCCAGGGAGGCATCCAGGGATTGGGGAGCTCTGCAAGTGGTTCGCATCACGCTCCCATTTCGGAGCAGGTGAAGTACGCCATCCTGGCGCAGCAGCTGAAGGCGCACAAGAACACCGATCTGCTGCAGCAGGCCTTGGCCCACGGATCGAGCAGCGTGGCCGGTAATCCCCTCCTGCACTTTGGGTATCCTTTGGCCGCTCCCAGTCCCCTGCACAATGGCAATCATCATCCGTCGGTGCCGTCTGTCAACATGGCTAATGATGATGATGAGCCCAAGCTGGTCATCGATGAGGATGAGAACGAGCAGGAGGATCATGAGGATCACGAGGTGGAGGAGGTCGATGACTTTGAGGAGGAGGATGAGGAGATGGAGGAGCAGGAGATAGAGGAGCCTGAAGAGGAGCAAGAGATCCCTCGCGAGGAGGATCAGGGAGCTCAACCCGCTGAAGAAGAGGAGCTCGAGGAAAGGGAACTCCCCAAACCGCTGGAGATGATCAATGGAGCATCGAAGGAGGCCGCCCAAAAGATGGCCGAAACCATTCTGGAGCAGGCCATCAAGGCGGGCACCAAGCCAACCAGCTCAACCAGCAATCCCAATCCCACCACCACCACCACCACCAGCAACTCCTCCATGCAGGAGCCACCACCATCAACCACAACCACTGGCAATCCGAGCACCCTGAAGACCATGATTGCCCAGGCGGAATCGGTGGGCAAGTCGCTCAAGGAAGTGGCCAGTTCCCCATTCAAGGACGAGTCGCAGGACCTGGTGCCAGTGGCCAAGCTGGTGGACAACGCCACCAGTCAGAACATGAGCTTCAACAGCTACTTCCGTCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGTCTGGTGGCCTCTGGGAGCGCCAGCGAGAGCAACAACAGCGGCACCGAGGACGTGACCAGCAGCAGCTCCTCCAGCGAACCCAAGAAGAAGTCCGCTTACAGTTTGGCACCCAATAGGGTTTCCTGCCCGTACTGCCAGCGGATGTTCCCGTGGAGCAGCTCCCTGCGTCGCCACATCCTCACGCACACCGGACAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCACGGCAACGTGGAGTCGGCCATGTCGGTCTACGTGCCCACCGAGGATGTCAGCGAACCGATTCCCGTGCCCAAGTCCCAGCTCATCCAGAAGCTGGCCGCCCAGATGAACGCCGCCGCTGCAGCAGCTGCTTCCATTGGAAATGGCAATCCCAGTGGCGGAGGAGCAGCAGGAGTGGCTGGTGGAGATGCCCTGGCTGGCGGAGATCTGCCCTACAAGTGCCACCTCTGCGAGGGATCCTTCGCCGAGCGATCGCAGTGCTTGGAGCACATCAAGCTGTCGCACACCCACGAGTTCGCTCTGCTCCTGGCCAAAGGAGCCATCGAAGCATCATCATCAGATGGCTTGGAGGCAAGCAACCACCAGTCCACTGCCCCCCAGTCCACCCATTCCGATGACGAGGCACCCAATGGCAACGGGAGTCGCGGCAAGTATCCCGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTCCGCCGCTTCTGGTCCACCGAGGATCTGAGGCGCCACATGCGCACCCATTCCGGGGAGCGGCCCTTCCAGTGCGACACCTGCCTGCGCAAGTTCACCCTGAAGCACAGCATGCTGCGCCACATGAAGAAGCACAGCGGTCGGGCCCATGGGAATGGCGACAATCCCGGTTCGGATTGCTCCGATGACGAGCAGGCGATGATGGGCAGTCCACCCAGTACCCCCGTTCCCACTTCGCTGCCCCTTCCCATGCCCACCAACAACAACAACAGCTGCCACAACAACAATAACAACAACAATAATACCACAAACAATGGTGGCTCCAAGGGATTGGGACTGAAGCTGCCCAAGCTGCACGAGCTGCTGGACAAGGCGAGCGAATGGCGCGTGGCCAGTCGGCTGGGCGAGCACAAGGAGAACATGGGCGAGGCCACGCCCTCCGCCGGCGGAGTGGGAGTGGCCGGATCGGATCTGATTGGCAACCTGCTGGGGATCAGCGACCAGGGGATCCTCAACAAGCTGCTCTCCTCCGCCGACGAGGCGGCCAAACTGCTCGGCGTGGACAACAAGTGA
Protein Sequence: MLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSTTSESSLEHLELGRTPKKLGGNGTTTQTTSTPHELAATSRKRKLRQLQQQMNHHQDLLSDEEDEEEEEDEEVSRNLGRLHKQRRGGGGAANATQASIVVDYSSGDASSLRKKFRLNRSAAASLSESGFGLSLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLLEDQLDEVDAVESKQRRLKKTTINNNIIDASEQPEEIDEMEDEMEEQEEEDADADADVAMLTSTPDVATLLAGASASGAGSRSVSPSPSESNSLLLSCPVCGASEFETLPALCAHLDASHSDIPAKCRDCEVIFASHRQVQAHCCRGSAASMGMGSGEDGEEEDEEELLDRKERLHHQSEDFFHQLYLKQKMPISHPPSPIKHEPADSKDLADIQSILNMTSSSSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADLSFRSISPTPPPPPTAINDSSSSQLKHMLLGENLNPVNQQPQQPPLKIQVKSLDQLVDKKPTSNHSTDKSSAALDFSMDVLDLSKKPNGGGAAAAATPSVTPSASPSMGIPAAAAAVTPGGGVTTPDLAAALEQQKLLLAQQQFFGAGGDAASQYMQQLFRSLMFQSQTPGFPFFPFMAPPPPPPPPQQQQSGAEKTPLVSPPNRLNPLPINVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSASSTSAAVAAAAAAMNQGGIQGGIQGLGSSASGSHHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLAAPSPLHNGNHHPSVPSVNMANDDDEPKLVIDEDENEQEDHEDHEVEEVDDFEEEDEEMEEQEIEEPEEEQEIPREEDQGAQPAEEEELEERELPKPLEMINGASKEAAQKMAETILEQAIKAGTKPTSSTSNPNPTTTTTTSNSSMQEPPPSTTTTGNPSTLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSQLIQKLAAQMNAAAAAAASIGNGNPSGGGAAGVAGGDALAGGDLPYKCHLCEGSFAERSQCLEHIKLSHTHEFALLLAKGAIEASSSDGLEASNHQSTAPQSTHSDDEAPNGNGSRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDTCLRKFTLKHSMLRHMKKHSGRAHGNGDNPGSDCSDDEQAMMGSPPSTPVPTSLPLPMPTNNNNSCHNNNNNNNNTTNNGGSKGLGLKLPKLHELLDKASEWRVASRLGEHKENMGEATPSAGGVGVAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -