Basic Information

Insect: Drosophila ficusphila
Gene Symbol: -
Assembly: GCA_018152265.1
Location: JAECXK010000196.1:1740523-1743316[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00079 0.056 13.8 0.3 1 23 474 496 474 496 0.99

2 7 0.03 2.1 8.8 1.7 1 23 504 526 504 526 0.97

3 7 0.00014 0.0097 16.2 0.6 1 23 535 557 535 557 0.98

4 7 3.5e-05 0.0025 18.0 0.2 3 23 631 651 629 651 0.97

5 7 0.00059 0.042 14.2 1.0 1 23 659 683 659 683 0.98

6 7 1.9e-07 1.4e-05 25.1 2.2 1 23 689 711 689 711 0.98

7 7 0.0002 0.014 15.7 0.1 1 23 717 739 717 739 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00079	0.056	13.8	0.3	1	23	474	496	474	496	0.99
2	7	0.03	2.1	8.8	1.7	1	23	504	526	504	526	0.97
3	7	0.00014	0.0097	16.2	0.6	1	23	535	557	535	557	0.98
4	7	3.5e-05	0.0025	18.0	0.2	3	23	631	651	629	651	0.97
5	7	0.00059	0.042	14.2	1.0	1	23	659	683	659	683	0.98
6	7	1.9e-07	1.4e-05	25.1	2.2	1	23	689	711	689	711	0.98
7	7	0.0002	0.014	15.7	0.1	1	23	717	739	717	739	0.98

Sequence Information

Coding Sequence: ATGAGTGTCCTGGCGTATCCACGTACTAACGACGAGGAGATTTTCCGTCACTGCACGAAGGACTGCGGAGTGGTGACAGCCACTGAGGACTTCCAGTACTTCGCCCTGCGATGCATCTTCTGCAGCGATAAGTTCCTCTACTTCGACTCCTTCATTGGCCACATGCAGACGGTCCATTTGGGCGACCAGTCCGTGGCGAATCCCGCCTCGCGTCACTCTTACAATCTCGGCGAGCCCATGTCCCTGTCCAGTCGAAACGGGGATATGCCCAATTTCCACGAGATCGAGGACCTAACGGATGCGGACACAGCACTCCTGGAGCCGCAGATGGTCATCAAACAGGAGCTTCAGGAGTTGCCCTGCAGCGACGACGATGTAGTTGCCGACGAGGACGATGACGATAGGCTGCATGATTCCGACGCCGGAGAAGATGAAGACGAGGCCATACTGCCCGAAAGCGATGCTCCGGTGGTCAGCTCCAAGTCACGAGCGCGCAAGAAGGTAACAAAGCCGCGCCAGGTGGACATCCCCAGCGGAGGTCTTATCGCCGGAGACGGTGACTCCTCCTTGGACGACTACGGCGATCCGGACCACAGCTACATGGATGACAATTCCGGAGAGTACATGGACTATGGCGGCTTCGATGGTGCCAATCACGGTGGCTTTGGCCCCGAATCTGATTTTCTCAGTTATGATGAGATGGTGGAGGAGTCGCTACTGGGACGCGACAGGGAGGTGACAATGCACATCAAGGACCGCAAGATGATACAGTTCCTCATCCATTCGTATCAGCGCAACCCCTTTCTGTGGGACCACGGCAACGCACAGTTCCGGGATCGCGTGAAGCGCGCCCGCTTCCTCGACTGGATCGTATTGGAGTTCAAGAGCCGCTTCAACATCTCCCTGGCAAAGGACGCGATCACCCGCAAGTGGGACAACCTGCGGACGGTGTACAAGCGGGAGTGCAATCGGATGGCCCTGGAGAAGACCAACATCAGCACGCTGTGGTACTTCAAGGAGCTGCACTTCCTCAATGAGGTGTACAGCTATAACGACAAAATGTCCGATGCCGTAGTCAAGGAAACCTCCTATCGTCGCCGTTTCTCGGCCATTTGGAACGACACATCGACGGCCAAGCTCCTGAGCATGGTGAAGCGGTACCAGTGCTTCTACAACCGCTTCGATCCCGACTACCGCAGCAAGGAGCGGCGCGGCGAGGGCCTCCACCAGATGGCCATTGAACTGCAGCAGCTGATCGACGTGACCACCATCCAGATCTCGAAGCGCATCTCCCAGCTGCGCTTCGACTACTCCAAGCAGAAGATGGAGCGGCTGAATAGCGAGCGTCTGGGAAAGAAGTTCATTGCCAACTATATATACTACGATCAAATGCACTTTATGGACGACGACATACCGCCGTTCAAGTGCCCGCACTGTCCGGAGATTGTGCAAACACTCAGGGAACTGGACCTTCACATGCTGACCCATCAGCCCAGTTTGGGTGGCGGCTACTACTGCAACATTTGCAGCATTCAGTTCCACAACGCCGAGGAGTTCGATAGCCACAAGCAGTTGCATTTGGGCGGCGTCGCGGAGGTGAAGTTCAACTGCGAACTGTGCACGGCCAGCTTCCGGGAGAAGGCCAACTACGAGGAGCACCTGCGGCGGCACAACGAGGAGCTGTTCCTGCCCTCGCTGGCGCTGAATCACAGCATCATGGATGGCGGTCCGGCGGACGATGAGATAGCAACCGAAGGCGAGGAATCCCGAGGCAGCGGTGGCCGTCGAAGAAGGACGGGCGGTGCGAATGCCTCAAAGTCCCCGGAGGGCATGGTCGACGATGAAGACCGGATGGGCGGAGGCGGCAGCGACATCGCCAAACCGTATGGGTGCGAGGTGTGCCGCCGCAGCTTCGCCACGCCGGGGCACCTGAATGCGCATCGCATCGTCCACCAGGATGAGCGGGAGCGATGCTACAAATGCGACTATCCCCAGTGCAATAAATCGTTTGTGGCGCGCAACAGTTTGTTCGAGCACTTGAAGCAGCACTACAGCAACGAGGAGTTCAAGTGCGACATCTGCGGCAAGACGTTCAAGTCGACGAAGAATCTGCAGAACCACAAGCAGATCCACGACAAGGTGAAGCGTTACGTGTGCCAGATATGCGGTTCGGCGTTCGCCCAGGCGGCCGGACTCTATCTGCACAAGCGGCGGCACAATCGACCCAATGGAGCCGTCGGCGCTGTGGGGCGTTCGGGTCGTAGCAGTCTGTGA
Protein Sequence: MSVLAYPRTNDEEIFRHCTKDCGVVTATEDFQYFALRCIFCSDKFLYFDSFIGHMQTVHLGDQSVANPASRHSYNLGEPMSLSSRNGDMPNFHEIEDLTDADTALLEPQMVIKQELQELPCSDDDVVADEDDDDRLHDSDAGEDEDEAILPESDAPVVSSKSRARKKVTKPRQVDIPSGGLIAGDGDSSLDDYGDPDHSYMDDNSGEYMDYGGFDGANHGGFGPESDFLSYDEMVEESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKETSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQISKRISQLRFDYSKQKMERLNSERLGKKFIANYIYYDQMHFMDDDIPPFKCPHCPEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFHNAEEFDSHKQLHLGGVAEVKFNCELCTASFREKANYEEHLRRHNEELFLPSLALNHSIMDGGPADDEIATEGEESRGSGGRRRRTGGANASKSPEGMVDDEDRMGGGGSDIAKPYGCEVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKVKRYVCQICGSAFAQAAGLYLHKRRHNRPNGAVGAVGRSGRSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00486859;
90% Identity: iTF_00565600;
80% Identity: -