Dfic008437.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- -
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000775.1:14082088-14088348[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0027 0.19 12.1 0.3 1 23 1309 1332 1309 1332 0.95 2 13 6.7 4.8e+02 1.4 0.2 1 23 1481 1503 1481 1503 0.91 3 13 0.00015 0.011 16.1 2.7 2 23 1506 1527 1506 1527 0.97 4 13 5.8e-05 0.0041 17.4 0.2 3 23 1535 1555 1533 1555 0.98 5 13 4.8e-07 3.4e-05 23.9 4.1 2 23 1562 1583 1561 1583 0.97 6 13 4.5 3.2e+02 1.9 0.4 5 23 1596 1614 1594 1614 0.96 7 13 1.1 80 3.8 5.4 3 23 1621 1642 1619 1642 0.93 8 13 0.12 8.5 6.9 0.2 2 23 1653 1673 1652 1673 0.96 9 13 0.00012 0.0087 16.3 0.3 1 19 1679 1697 1679 1701 0.95 10 13 2.9e-05 0.0021 18.3 0.4 1 23 1709 1731 1709 1731 0.98 11 13 8.6e-05 0.0061 16.8 7.6 1 23 1737 1759 1737 1760 0.96 12 13 0.00018 0.013 15.8 6.5 1 23 1765 1787 1765 1787 0.98 13 13 0.0022 0.16 12.4 6.1 1 23 1793 1815 1793 1816 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAATAGCGTTCAGTGCCCCGTGTGCACTTTGTACCTGCACGCGGGCATGAATCTCTCCGATCACCTGGAGACCCATCCCAAGGAGCAGGTGATCCGGGCGCTGGTGCAGATGACGATCGTCGGAAGCGGTGGCAACAGCATGGGCAGTGCTCTGGCTGCCGCCATGATGACAGGAGGAAGTGCCAGTGAATCAACGGCAGTTGATGAGAAACCAGCCGTCTTATCACCGCCTTCTGGTGGCGATGTCAAACCAGTTGTGGGCCAAACCATATCAGCGGCAACAGCAGCAGCGCCGCCACCGCTATCCTCCTCTCTCGTGGCAGCCTGCTCCAATGGAGCCACCACCTCCACCGCCGCCGCCGCAAGCAGCTCCACACCCACCTCCCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCCCCACCTCCGCTGCAGCTATTTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTCCCGCCTATGGAGCCGCCATCAGTCAAATACGATCTCAGCACAACCAAAACAAGCAGCAGCCACAGCCTCAAATCGTGGCGGTGCACCACAACCTAACCCTAGCACCACCGACGTCGGCAGCGGCTGCAACTGCATCGCTCGCAACTGTGGTTGGCAAGCAGCCCAGTAAGCCGCATTCGGAGGTATTCCTGAATCCCCCACCACCGCCGCCGGCCCAGCAGCAGCAGCAGCAGCACGCGCCGATCCACAATCTGGGGCAGCATCAGGCGAATCATCAGGCGAGCAACCAGCACCATCAGCATCCCCACCACCAGCCGCCGCAGCAGCCACAGCAGCTGGCCACATCGTCCTCGGGCAGATTGCAGCAGCACCACCAGCAGTCGTCGAGCTTGCAGGCCTACGGATCGGGTGTCAGCAGTGGCTGCAGTTCCGCCAACAACCCCTCGACCTCCACATCCGGTCTGCGGGTCAATCGACAGACGAACTCGCCGTTCGGTGCACTGCTCAATGCTGCGGCGGCTGTGGCCTGCGCCTCGCCAGCTTCGTCCACCGCCTCCTCCTCGGTGCTCCGCTATGCGGAGTCACCGGTGGCTCACTACTTGGAGCGCGAAAACGGTGACTTCATTGTCCAGGAAACGCCAAAGCATATTGTCGAGTGTGTGGAGAAGGAGGACGGCGAGTTCTCCGTGATCGAGCGCATTTACCAATCCCCGCCGAGTGTCCTGCACATACATGACGACGATGAGGACGAGGAGGATGAGGAGGAGGAGGTCGACCACGAAGCTCCGCCGGAGGAGGAGGACGGTGACGATGAGCGCGAGGAGAACAGCCACAGCCGTAACATGAGCAAGACAACGAAAAAAGCCCGCAAGACGAAGCCAAAGCGAAGCTCCAAGCGCGTCTCCGAGGAGGAGGAGTTCATGAGCTTGAGCAGTGGATGCGAGAGTGAGCTGGATGGAGAGCGCAAGCCGGAGCAGCCGAGCACGTCCACCGCTCTACCGCCTCCTCTTTCCACAGCTCCTTCGACGAGCACCGCTGCTGGCGCCTTCGCTAGCTCCTCCAATCTGGCGGACAATCATTCCAATTCCGCCTCGAACTCCGCCTCCAATTCCAACTCTACGACCACCACAAAGTCCAAGAAGAATCGAATCACAGTGCTCAGCGATGTGCCGCTCAATATGAACGAGTATCTCGATCTGATGGGCAACATCGTGGCCTCCAGTCGCATCGGCACCAGTCGTCCCTTTGCCGCCGTGGCTCCCATACCGCTCGTGAAGGTGGAGAAGGAGGAGCCCTTGGATGACTACGACAACATGCCAATGCCACTGCAGCAGCTGGAGCAGAAGCCCAGCGTGGAGCACGGCACCACCAGTGTGATTCGCATGGCCAGCACGGCTACTGCGTCGTCGACTGGAGCGTCGCCGGATGCTGAAGCGTCTCCCGAGGATCTCACCCAGCCGCCGCAGTTGAAGGTCGAGGTGGAGCCCACCAGATTGATACCGCAGCGCTTCTCCACACCCGCACAGCATCGCGGTCCCAAGAAATTAGTCATCAAACCAAAAGCGACAGCAGCAGCGACAGCGACGACAACGAAAAAGACTGACACCCCAACTTCCGCCAGCAGCAGCAGCAGCAACCCATCCATATCAAGAGATCTGGTGCAGGTGAAGAGCGAGACCGTGGAGACCCCAGCGCCGAGCAGCAGCAGTAGCAGCAGCATTCTGGAGAAGCACCTGACCACCAGCCGCAAACTGATCCAGCACCACTCGGCGGTGAACGATGACGATGCCCGGGTTCTGTTGGAGTTCGCCAACTCCAAGCAGCCGCCGCCGCTGGCCGCTTCTAGCACCACGTTCGTGGTGAACGCCAGCGCTGGATTTCCTTCGGCGGGATCGGTGTTCGCCAGCAGCAGCAGCAGCAGCTGCTCCAAGGCGGCAACGGTGGCCAAGCCGGGCGAGGAGTACATCCTGCCGGACAACAACATGGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACAACTCCTCAGCGGCCCAGGGGCAGGCCCAGCTGCAGCCGCCCGACTTTAACTTTCTGTACCACCAGACCACGACCACGGCCACGACGGCCACCTACTTTAATTCCTTCTCGAGGCAGCAGCACCACCAGCAGCCGCACCATCAGCAGCACGGTGTTAGTGATGCCACCAATGCGGCCACTTTGGCCTCGTCGTCGAGCAACTCGTTGGATCACGACTCGATGAATGCCATGTTCCGGGTGACCAAGACGCAGTCGCTGCAGTCATGGTTCCAGCAGGAGCAGGATCACGACCCGCAGAATCCTGGAGGTGTGGGTTCGGGAACAGCCACGCCCTCGAATCAAAGCCAGGATGTTGTCAGTCACCAGCCCACCAATTTCAATGCCGCCCTGGCGGCCGTCGATTGTTGCAGCGTTGCTCTGGACGAGGATGCCAAGTATCTGGACCTGGACACCTGCAAGCGGGAGCAGTTGAGCAGCAGCAGCAACCTGCCCTCCGCATCCGCATCCACCACGTCGTCTTCATTCGCCGGCGCTGGCACGGAGAGCAGTTTGGTGGGCGGCCTGAACATCCGCACCGATGAGAAGATGCCCGCCAAGGGTGAAATCTCTGAGCAGGAGAGCAACTGCGACATCGAGAACTCTTGGAGTGAGTCGGTTTATGGGGATATTTCGCAGCGGTATTTCAGAAACCACGCCCAGCAAAGGGAGCAAAAGCGTTTCGATTTCAATGCGGTTGATGATGAGGCTTCATCCAGCTCCCGGAAAAGTCAGCTTACAGATGGCCTTCCAATGGCGGCCACCTCCTCCCCCTCCACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCCTCGACATCTCGGGCTGCCGCAGAGGCAGCAGCGGAGGCGGCTGCTCTCGCCCAGCGAAAACCGCAGCGGCGCAAGGTCTACAAGTGTCCACACTGCGATGCGATTTTCGAAAAGCTCAAAGAGCGCAATGCGCACATGATTGGCGAGCACAACTATGTGCGCCAGAACCGCCGACTCATCTGCACTCAGCCGCAGGTCAGCACATCGATGCTGCCGCCGCAGCAGCAGATGATTATGCAGGCGACCGATGCCTTGCAAGAGGATTCCAAGGACGGCATTATCAAGATAAAGCAGGAGCAGTGCCAGGAGAAGCAGGATGTTGAGCATATGCACGCCCATTCCGACCTGCTGTCGGATGTCAAGGACTCCGAGCTGCTGGGCATCGGTGGTGATGGTGACGCGGATGTGGATGGCGACATTAAACCACCCAGCCAGCTGGACGAGAAGCCTACCCTGCCAACGCTGGCCATGACCACACCGGCCGCCAAATTGGCAGCTTTGTACCGAATGCTTATCGCCTACAACGAGTCCAAGCTCGGTCAGGAACGGAATAACCTCAGCGAACTGGAGCAGAAGGCCATGGAAAAGTCGATATTTCTGTGCTACGTCTGCCGCACCGACTTCCCGTCCGTAAAGCTATACGACGCCCATCTCACCGAGCATCCAGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTATCGCTGGAAAAACTTCTCGCTCCACTTGAAGCGGCACTTGGGCTGGAAGGAGTTCGGATGCTATGTCTGCGACAAGAAGTTCGTGGTGCGCAGCGCCCTCGTCGAGCACATGCGGATGCACACGGGCCAAACGCCGCTTAAGTGCAAGATATGCGGTAAAAAATTCAAACGCTACTCGAATCTGACGCAACACCGCAAGCGGCACACCAAGATGATGGTGCGCAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCGTCGAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACTTGAAGCCCAAGTGCTGTCCGTACTGCTGCGATCGGTTCGTGCACGCCAACTCGCTGCGTCGCCACATCCGGCTGGCGCATTCCGACAAGTTCGACTACGCCGAACCGATGGAGTGTCCGATGTGCAAGCAGATCTTCGCCAAGACGTCGATCAAGGCGCACATGGCGACGCACTCGACAGAGCCGCAGTACGACTGCGCCATCTGCAGTAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTGCACGCCAACCGAACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCGAAGGCGTTCGTCCGGGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTACATGAGGCATCGGCGCGAGCATCACGGTACGAAGAAGTTCACCTGCGACCAGTGCGACAAGTCCTTCCATCGGCACTACTATCTGATCGAGCACCGGCGCATGCACACCGGGGAGCGACCGTTCACTTGCACCATCTGCGGAAAGAGCTCCACCACGAAGACCAATCACAACAAGCATCTGAAAATCCACCACTCGCGCGATCCCTTCACCGTGGAGGCCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTIVGSGGNSMGSALAAAMMTGGSASESTAVDEKPAVLSPPSGGDVKPVVGQTISAATAAAPPPLSSSLVAACSNGATTSTAAAASSSTPTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPLQLFTXXXXXXXXXXXXXXXXXXXXXXXXXXPPAYGAAISQIRSQHNQNKQQPQPQIVAVHHNLTLAPPTSAAAATASLATVVGKQPSKPHSEVFLNPPPPPPAQQQQQQHAPIHNLGQHQANHQASNQHHQHPHHQPPQQPQQLATSSSGRLQQHHQQSSSLQAYGSGVSSGCSSANNPSTSTSGLRVNRQTNSPFGALLNAAAAVACASPASSTASSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEVDHEAPPEEEDGDDEREENSHSRNMSKTTKKARKTKPKRSSKRVSEEEEFMSLSSGCESELDGERKPEQPSTSTALPPPLSTAPSTSTAAGAFASSSNLADNHSNSASNSASNSNSTTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGTSRPFAAVAPIPLVKVEKEEPLDDYDNMPMPLQQLEQKPSVEHGTTSVIRMASTATASSTGASPDAEASPEDLTQPPQLKVEVEPTRLIPQRFSTPAQHRGPKKLVIKPKATAAATATTTKKTDTPTSASSSSSNPSISRDLVQVKSETVETPAPSSSSSSSILEKHLTTSRKLIQHHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASAGFPSAGSVFASSSSSSCSKAATVAKPGEEYILPDNNMDVDEIVISSSSSYNSSAAQGQAQLQPPDFNFLYHQTTTTATTATYFNSFSRQQHHQQPHHQQHGVSDATNAATLASSSSNSLDHDSMNAMFRVTKTQSLQSWFQQEQDHDPQNPGGVGSGTATPSNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDTCKREQLSSSSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNHAQQREQKRFDFNAVDDEASSSSRKSQLTDGLPMAATSSPSTSSALLAGPPIASTSRAAAEAAAEAAALAQRKPQRRKVYKCPHCDAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVSTSMLPPQQQMIMQATDALQEDSKDGIIKIKQEQCQEKQDVEHMHAHSDLLSDVKDSELLGIGGDGDADVDGDIKPPSQLDEKPTLPTLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -