Basic Information

Gene Symbol
Trerf1
Assembly
GCA_018152265.1
Location
JAECXK010000775.1:25933820-25967655[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-10 1.7e-07 31.0 0.1 2 45 1267 1310 1266 1311 0.94

Sequence Information

Coding Sequence
ATGTGCAGCGCCTCCGTGGGGAGCGAAGGATCCGTGACTCTGCAACTGCGGGATGCGAACGCCTTGGAGGCGGCGGCCACGAAATCAGCGACATCAGCCGTCTCATCGACGACGTCACCAAATGGCGCCGCTGCCGGTGCACCAGCGTCAACGCTAGAGAATGCGCTGACCATCGGCTATCCGGATCCGGAAATGTTGGCAGATGTCTTGGGCACAATTCAGACAGCCTCCACAAGCGGTACAAATAGCGGTACTTCTAGTACTAGTATTGGTGGCATCATCAGCGTTGAAGCGCCGCGCAAGAATCGACCCAAATTATCATCGCCAACGCGTCACGGACCGCAGCAGTGTCAGATTTGTTGCAAGATCTTTGGAAATGCCTCGGCGCTGGCCAAGCACAAACTGACGCACAGCGACGAGCGGAAATACATCTGTGCGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAGTGTAAGGCGGACGGGTGCGGCAAGTCCTACTGCGATGCCAGATCCCTGAGGCGCCACTCGGAGAACCACCATGCGGGCGGTGCAGCCACGCCCACCACCAGCCAGTCCCTATCGCCCACCGCCAGTTCGAGTGGCACCAGTGTGGCCACCAGCTCGCTGAGTCTCTCCCCAGCCACGGCGAGTGGTGATGCCAGTTCCCCGGACGGAGCAACCTGCATCCGGACGTACATCTCCACCGGCAGCTCGGTGGTGGATGCGGCCACCGGGATCGCTCTGTCGGAGGAGCAGATCAAGGCCATGAACCTGCCCATCAAGACGGGCGTCACTCTGCTCTCGCCCACCACCTCGACCTCCTCGAATGCCTCTTCGAATGCCTCCTCGTCTGCCAGCTCTTCGCCCACCATCACTCTCAGCGATGGAATGAGTCTCGAGGGCGAGGGCCTCACCCGCGAGCAGTTGGATCTCATCAGCAAGATTATGCAGCAAACGAAGCAGACGAGTGCCCAGGTCACCGTCTCCTCGCCCACCAGTGTCAGCTCCTACAAGATCAACACGAACTCCTCGTCCTCGCAGAACAGACCGCGCACCTGGAACATGCAATTGTTAAATAGTGCACAGAATGTGACTGTCACCGTGGAGGACAACTCCGAACTGGTGGCTCCCTCCTCGAATTCTCCCGTGGAAGTGAAGGAGGAGGAGCTGAGTCCACAGCTCGTGGGCACCATGAATTCCCACCTGCTCAACATCGTCAAGCTCGACAAACCGACGGCCAGCATTGGAGTGAGAGCTCTCATCGAGGAGAAGATCATCAGCAAGCGCAAGGACATGACTAAGGGTTCCTTTGTGGTTCCTGCACCGCCGCACAGTAGTGGCGCCACCACCACCCTGCGTCGATCGATCAGCGATCTGGAGAGCTTCCTCAACCCGAAGACGAGCACCAGCAGTCACACCCAGACGATGACCACCAGCACGGGCACCACGACGGCGGTTCTCCCGGCGGCCACCACCATAAAGAGCAGCAACGGGCTGAGCATTCAGCAGATTGGCCTGCCCCAGAGCATCGAGATCTTCAGCGGAGGTCAGAAGCAGGCGAAGACCCTCAATCTGGGCACGGGAACCAATACGATCACCATTACCACCAACAACGTGCCCACCACCACGACAATGAGTGCTCTCACAGCTCTTAAAGCAGGAGGCACCATCAGCGGGATATCCACGGCCACCAACACGGATCCCAAGGACTCCACCCTCATTGAACTTCTGAAGAGGGGAACTCGCATTGCGGTCACCTCTAAGAAAAACCAATCCCAAGGACAAACTGGCTCTGGTTTAATGATGACCTCCAGTGGAACGACCACAAATGAGTTGACCACTTTGGGTAACAGTGGTGTGCAGACCGTCGGAAGGCAGATCATAACCAACAACAACAGGACGGTGATCATCCCCTCCGATGTTCAGGTGGTGTCCACCAAGAGCAAGCTGAGCAGCTTGAGTGGTTTGGTGAAGGGTAACATCACCAGCAGTTCCTCGGGAAATCTCTCCCTGGCGGATGGCACCCCGCTCTCCCTGACAATCGCTCCCAACCAGGAGCTCCAAGCCGGAGGAGCAGGATCCTCCGGAACGGGGAATGTGATCAGCGGCGGGGAGGGAGGAGTCTACACGGTGACCTACACCAGTGATGGCACCGATCTCTTCGACGACGCGGAGGTGTACAACGTTTCGGATACCGAGATGCTGCTGCAAACAGTGGACTCCATGGAGCTGCTCAACGACGAGGAGGACGAGCCGCAGATCAAGAGCGAACATTCCGAGGACTTTGCCCTGCTGAGCGAAGCGGGCGACAGTGCGCACACCCAGCTGGTGAAGCTGGAGCCGGAGCAGGTCAACTCCGGAGGCGGAAACGGAACCGGAAATGGAAACGGATCCAGTGCGAACACCACGCCGCTGCCCACCTTCCAGCAATTCCATTCCAAGGAGCTGATCATGCAGAACAGCTCGCAGATCCAGGCGATAGCCAGCATGCGGGGAAGCGGAAACATGGCCCAGAGTTCCCCGTTCATCGAGGATGCGGCCGCCCAGTTCGTGGATGCCAGCAACACCTTCTTCGGGGATAAGACCGATTTCTCGCACATCTACTTCAAGACGGATGAGGGCGAGGCCACCATTGAGCAGATGAACGAGCACGACAACGAGAAGATCCTGAAACTGAAGTCCGTGCTGGAGGAGAGCACCTTTGATCCTTCAATTAAAGTAGAAGATTTATTAAATGGCGCAGATGATGACACGGAGTGCGATTTGCGGGAGTTTGCAGAGACGAATCTCTCTTTTCTGGATGAAGATCAGGAGTTTTTGAATGACTCCAGGAATGCCACCTCCCCGCTCTCGGAATCCTTCTTCACCAGCGGCATTGTGGCCAGCCAAACCCAGTACATGGACAGCGGGGGACAGGGGGGAATGCAGGGGATGCAGCCCCTCAACAGCCTGCTGCAACCACTGCTCTTCGGCGGGGCAACCACATCTAATGGCAGCGCCGCAGGCGGGGGCAATGAAACCACCACTCTGCTCACCGCCACCGATTGCCAAATGAATGCCAATCAAGGCCAAATCGATGCCAGTCTGCTGTTTGCCTGTGGCAACACAACAACAACAATAGCAGCAGCAACGGGAGGAGGAGGAGTGGTTAATAAACCTCTGGCCAATCCGCCGAGCGTGGCCAATCTGCAGCCGCTGTCGAACCAAACCAATTCCATTCTGAAGCGCCGACTGCGCAGCAATGCCCCCCAGGAGACGCACAAGTTCTCCAAGTTCCACACCCTCTCCCCGCATCGATCCAAGCTGCGCAAGCCATCCCGCACCCACTACACTCCTGCTCCCATCCTGAATCCGGATCGAAAGGGCACCGGACTCTACTGCAATGTGCGCAAGCAACTCGGTCAGGGATTGTTCGACGCCTTCGACGACGACTTCGGGGATTCCGTTGGACTGGTCGACTTCTCGGACGAGTCCAAGGTCAATCTGGGTTCCACCTACCAGGCGCAGATTCCCAGCTGTCGACCGATGGAGGAGGCGGTCAGGGATTCCCCCTGCGCCGAGCTGATGTGGAATCCCGAGGTGCAGGAGGACGACAAGATCCTGATGCGCTACATTGATCTCAGCAAGTCCTCGGCCGTTCCCATGGGCAGTCATTCCGAGGAGGTGGCGCTCCACACGCTGCTCAAGGCTAAGGGCAACTCGGCGGCGGCCGTTCTGAGTCTGCTCCAAACCCAGTCAGGCGCCTTCCAGATGAAGTGGACCGCCTACGAGTTGGAGCAGTTCCTGCGGGGACTGGAGAAGCACGGCAAGGACTTCGGCAAGATCGCCAGCGAGCTCCAGACAAAATCCTCCGGCGAGTGCGTGCAGATGTACTACTTCTGGAAGAAGCTGTGCGTGGACTACAAGGTGTCGCACCTGAAAATGGAGCCCGTGGTCGTAATTACACCCGCCGTGGAGAAGCCCTACGTCTGCGAGATCGCCGACTGTTCAGCGAGCTTCAGCTCGAAAGCAGCGCTGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGTCGGCGCTTTCGGGCACGCCCAAATTGGACGTGGGACTGGGCGGTGGCACCTTACCGCTTCCCAAGGAGGGCGAGTTCCCCTGCAAGGTGTGCGGCAAGGTCTTCAATAAGGTGAAGAGTCGCAGTGCGCACATGAAGACGCACCGGGTCCAGGAACCGGATCAGAAACACCAGCTGAACCAGCAGGCTGCTGCAGGATTGACCACCGTCGCCTCATCAACCATTATAGCACCCTCATAG
Protein Sequence
MCSASVGSEGSVTLQLRDANALEAAATKSATSAVSSTTSPNGAAAGAPASTLENALTIGYPDPEMLADVLGTIQTASTSGTNSGTSSTSIGGIISVEAPRKNRPKLSSPTRHGPQQCQICCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHAGGAATPTTSQSLSPTASSSGTSVATSSLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSEEQIKAMNLPIKTGVTLLSPTTSTSSNASSNASSSASSSPTITLSDGMSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNSSSSQNRPRTWNMQLLNSAQNVTVTVEDNSELVAPSSNSPVEVKEEELSPQLVGTMNSHLLNIVKLDKPTASIGVRALIEEKIISKRKDMTKGSFVVPAPPHSSGATTTLRRSISDLESFLNPKTSTSSHTQTMTTSTGTTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQAKTLNLGTGTNTITITTNNVPTTTTMSALTALKAGGTISGISTATNTDPKDSTLIELLKRGTRIAVTSKKNQSQGQTGSGLMMTSSGTTTNELTTLGNSGVQTVGRQIITNNNRTVIIPSDVQVVSTKSKLSSLSGLVKGNITSSSSGNLSLADGTPLSLTIAPNQELQAGGAGSSGTGNVISGGEGGVYTVTYTSDGTDLFDDAEVYNVSDTEMLLQTVDSMELLNDEEDEPQIKSEHSEDFALLSEAGDSAHTQLVKLEPEQVNSGGGNGTGNGNGSSANTTPLPTFQQFHSKELIMQNSSQIQAIASMRGSGNMAQSSPFIEDAAAQFVDASNTFFGDKTDFSHIYFKTDEGEATIEQMNEHDNEKILKLKSVLEESTFDPSIKVEDLLNGADDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIVASQTQYMDSGGQGGMQGMQPLNSLLQPLLFGGATTSNGSAAGGGNETTTLLTATDCQMNANQGQIDASLLFACGNTTTTIAAATGGGGVVNKPLANPPSVANLQPLSNQTNSILKRRLRSNAPQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCNVRKQLGQGLFDAFDDDFGDSVGLVDFSDESKVNLGSTYQAQIPSCRPMEEAVRDSPCAELMWNPEVQEDDKILMRYIDLSKSSAVPMGSHSEEVALHTLLKAKGNSAAAVLSLLQTQSGAFQMKWTAYELEQFLRGLEKHGKDFGKIASELQTKSSGECVQMYYFWKKLCVDYKVSHLKMEPVVVITPAVEKPYVCEIADCSASFSSKAALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALSGTPKLDVGLGGGTLPLPKEGEFPCKVCGKVFNKVKSRSAHMKTHRVQEPDQKHQLNQQAAAGLTTVASSTIIAPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00507894;
90% Identity
iTF_00507894;
80% Identity
iTF_00507894;