Dfic010204.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- bab1
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000283.1:7218430-7220388[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-18 1.5e-14 53.2 0.0 1 43 55 98 55 100 0.95 2 2 2.6 5.3e+03 -2.9 0.3 6 12 203 209 196 212 0.73
Sequence Information
- Coding Sequence
- ATGATAGAGAATTCGCATGCCTGGATGGGCGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGGGGACCCCTCAAGTCCTGGCGTCCCGAAACCATGGCCGAGGCCATCTTCAGCGTGCTGAAGGAGGGACTCTCCCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTATCCCACGTTCGTGCTCTATGCGAACCGGGTGCACAACATGCTGGGTCCGTCCATCGACGGCGGGCCGGACTTGAGGCCCAAGGGACGTGGCAGGCCGCAGAGGATCCTACTGGGCATCTGGCCGGACGAGCACATCAAGGGCGTCATCAAGACGGTGGTCTTTCGCGACACCAAGGACATCAAGGACGACAGCCTGGCCGCTCACATGCCGCCCTACGGTCGACATTCGGACCTGCCATTGAGCTATCCCGGCGCAAGTGGCGCCCTGGCAGGCACGCCCAGCTCCTTGGCCTGTCCGAATGGCAGTGGTCCGCAGGCGGGCGTGGGTGGCGAGCAGCACATGTCGCAGGAAACTGCCGCTGCGGTCGCGGCGGTGGCCCACAATATCCGGCAACAAATGCAGATGGCAGCGGTGGCGCAGCACCAGGGATCCCAGCATCAGCCCGTTCCGCCGGGCTTGTTTAATCTACCACCCCATCCTGGAGTGGGTGGTGCGATACCAGGTATTATTTTACCCATTTATGGGCCTCGTCCATGCAACGCGATGCCCATCCTGCCGCCCTCCGAGAAGCGCAATTCCAGGCGCGGAGCCAAGGAGGTGGCCACATCGCACAGCAGCTCCATCTGCAGCAGCAGCAACAGGTGCGTCACAAGTGCTCCATCTCTTAAGAAGATAAGCAATAAGCAATCCTTCTGCTTTTTACAGGAGCGTAGACCTTGTGGTTGTCCCTTTGGCCCATGGCCATGTCCACATCACCATCATCAGCAGCATCATCAGGGCCACCAGGTGGCCCACAAGGCCGGTTTCGGTGCCAGTTCCAGTTCCTCCACCTCCTCCTCGATGGGCCAGCATCCGCCCAAGGCCAAAGGCAGTCCGCTGCGCAGCGAAACGCCGCTGCTCCACTCCCCGCTCGGCGATCTCGGCCTGAACATGGCCGGCTACAAGCGGGAGTTCTCGCCCAGCCGCCTCTTCGCCGAGGACCTGGCCGAGTTGGTGGGCGCCAGTGTCTCATCTTCCTCGTCCTCGGCGGCGGCGGCGGGATCTGCTCCACCGGAAAGGTCGGCGGCAGGATCCTCGGCAGCAGCGGGCGCCGATGCGCCCAGTTCCTCCAGCAGCGGTGGCATCAAAGTGGAGCCCATCACCACCACTAGCGAGTAA
- Protein Sequence
- MIENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSDLPLSYPGASGALAGTPSSLACPNGSGPQAGVGGEQHMSQETAAAVAAVAHNIRQQMQMAAVAQHQGSQHQPVPPGLFNLPPHPGVGGAIPGIILPIYGPRPCNAMPILPPSEKRNSRRGAKEVATSHSSSICSSSNRCVTSAPSLKKISNKQSFCFLQERRPCGCPFGPWPCPHHHHQQHHQGHQVAHKAGFGASSSSSTSSSMGQHPPKAKGSPLRSETPLLHSPLGDLGLNMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAAGSAPPERSAAGSSAAAGADAPSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -