Dfic010193.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- -
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000283.1:9778650-9780269[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-16 2.6e-13 49.3 0.0 2 44 352 394 351 395 0.93 2 3 0.035 70 3.1 0.0 28 37 425 434 420 439 0.89 3 3 5.5e-20 1.1e-16 60.1 0.0 2 44 461 503 460 504 0.94
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGGCACTCGTCCACGATAATGGATATACAGCGCTCGCTGCGCAACGACAGCGAGAACTGCGAAGTGGTTCTGGCCTCCAGGGACGGCGTCCGGGTGCGAGCCCACCTTTTCGTGCTTAGCACCTGCAGTGAGCTGATGCGGAACCTTTTGGTCGATGTGCCCCGTGGCCAGGAGGCCACCATCATGCTGCCCGACATTCGCGGCGATCTGCTTGAAAGTATGCTTTCATTCATCTACATGGGCGAGACCAGTCTGCCTTCCGCCTCGCTGTCCGAGTTCCTGGAGGCTATCAACCTGTTGGGCATCAAGTCGGCTATCAGCTTTGAGTGCAATCCCTCGGCCAGTCCGCCCAGTGCGGATGTGGGAAGCGGTTCGATGGCCGTTGAGACAGCTAAGTCGATAACTGGCCTGCAAATCGCCGAAGCCGAGCTACTGGATGAGGAGGAGGATGGTTCGGCACAGCCGGCCGAGACCGTGCCGACGACCGTTCTGGCAGAACCCCAGCACCAGCCCACTCACTCCAACCGGTCACTGGAGTACCTGGACGTGTACGAGCCGCCAAAGATCACCTACTCTATAGAGCACATGGACGGCCATTCGAGCGGAAACCAGTTCATCCTAACCGAAAACACGGGCACCTTTACCATCACACAGTCCGCCTCCAGCTTGACCAAGTTGGAAGCCGATGAGACAGTCGCCAGTGGTACCGAAGTGGAGCTGGTAGACGACGACGCCGAGGCGGAAATGGCGGAGGATGACTCGGAGGAACAAGACAACCAGATGATCGAGGAAGACTTCGCGGCATCAGATCCACTCATCGAGCTAGGCACTGCCGCAGAAATGGATGACGACGAGGACGTGCCGGTTGACATGGCGGACGAGGAGATCGAGGACGTAAAGCCCCGAAAGTTGCTCGAAGGCAAACCGCGGGTCCGCCGCCCGGTAAATGCAAAACCCACAAAGCGATCGCCAAGCAAACCAACGCGACTCCAGCAGTTTGTGGCACTTAAGCGGGAAATCAAAGACGATATCAACGACGCTCTGGATCTGGCGGCGGAGGCAGTGATCGTCGAGGGGTTGAGCTTACAAAAGGCCGCGGACCGCTTTGATATCTCCAAAACCGTCTTGTGGCGTCGAGTGCGCACCAATCCCGCCTACACACGCAACAACAGAGAACGACCATCGCTGCTAGAGGCCTATGAGCGCCTGAAGAACGGGGACTCGCTAAAGAGCATCAGCACAGAATTGCAGATCCCCATGTCTACGCTGCACCGGCATAAGGTTCGTCTGTCGGCGCAGGGACGTCTGCCGGACTTCGTGGCCTGCCGCAAGCGAGACACCACACCCAAGGATGAGTTGCGGGACAAACTGGCAAAGGCGGTGCACGCCTGCCTGAACGAGGGCATGTCCCAAAACCACGCGGCCAACCTGTTCGAGATCCCCAAGAGCACACTCTGGCGACACCTGCAGCGACGCTTATCCAACCAGAACCGCAAGGTCAAAAAGGAGCTGCAGGACGAGTACGAGGACGATCTCCTGATCTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDSENCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIMLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPPSADVGSGSMAVETAKSITGLQIAEAELLDEEEDGSAQPAETVPTTVLAEPQHQPTHSNRSLEYLDVYEPPKITYSIEHMDGHSSGNQFILTENTGTFTITQSASSLTKLEADETVASGTEVELVDDDAEAEMAEDDSEEQDNQMIEEDFAASDPLIELGTAAEMDDDEDVPVDMADEEIEDVKPRKLLEGKPRVRRPVNAKPTKRSPSKPTRLQQFVALKREIKDDINDALDLAAEAVIVEGLSLQKAADRFDISKTVLWRRVRTNPAYTRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKVRLSAQGRLPDFVACRKRDTTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRLSNQNRKVKKELQDEYEDDLLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00507711;
- 80% Identity
- iTF_00507711;