Basic Information

Gene Symbol
pnr
Assembly
GCA_035045575.1
Location
JAWNOV010000142.1:4924325-4929044[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6 3.1e+03 -2.0 0.6 16 25 60 69 57 69 0.77
2 3 6.3 1.3e+04 -3.9 0.7 1 6 240 245 240 246 0.83
3 3 1.6e-16 3.1e-13 49.2 2.5 1 35 731 764 731 765 0.98

Sequence Information

Coding Sequence
ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCAGAGatctacaaatttataatagtgAGACAAGCGCAAATGAAACAGTTGGCAGTAGCCAACATCAATTATATGTTAATCAGTGCAATATTAATGAGAAtgcatcgaaatcgaattcaaAATGTGTATGCAATGCATTGGACCCAAATCCAAATACATGTTGCTGCCAATGTGATAACTCGTTATCAGCAGAGCAAAGCAATAATCCAAAACCGAATCCTcaacataaaaatacaaataaaaacaattatacacCGAGTGTGCCTTCTGCTATTGCCAACCCGCCATGCAcaattgacaacaacaacattatgtATGCATGCATGTTTTCCAATCAATCGcaaaatgaagtaaaaataACGAGTGAAGCAACAAATCCAATTGGCcaggaggagcaacaacaatttatacccaacaacaacaacaataagcagcagcagcaaaatgaTATTGTTCTTTACGATAATGCCACTAAATCGTCATCAGCAACAAAACATCATGTATTTCATGATATCGGCGAAAATACTTCAAGCAACGAAAATTACAATCAAGAGCATAAAGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTACCGAATGATGGATTCCCTACAATTATCTGCCGTGAGTGCCGGACAAAGCTTGAATCGTTTTCGAAGTTTCGCAACATGGCGTTGAATTCACATTTGGCATTAAGAGAATTTGTAACAATATCGAAATCGTCAAAGCTTgATACAAGTCATATGGAATCAAAACTTGATGAAATTTTGAAGTCAACATCCGAGGCAATAGCGGCAAAGGCACTGACTGAACTGAGCAAATCTTCAAAAACCAGATATAGCCAACGACAACCGAAACTTGATGGTGTCTTAAACTCAGCAAAGATTCTGGAGCGACATGTAGAGAATAACATAAGAGACATTCAGACTCCTTTATTATATTCAAACTTATTTGAAAGTCCATCCCTATCACAAACATCCAGTAATGCTATTGAAAGAGAGCCGATAATGATTCAAGATTCAAATCTAATGACAGCGcgaacagcaacagaaacagtaacaacaacaaaagcaacaattaaaacagagaaattttttgaattagaTAACGGTACGGCGATGAATTCAAAAGATCCAGATGTTGAGCAATATAAAAACTTGCAACAGCAATTAGAGACTGCCGCAGTGCTTATGGATATAAGTAAAAAGATTGTCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCAATTGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATCGATAATGAGATGCAAGATAGTGTTGAAATCGACTTGTCcgtgaaaaagaaaaaaattgaatattcaaCTGAACGGAATGTTGTAGCtccgacaacagcaacaccagcaacaacacgtAACACATTTGGTCAACCTCCAATACTTGATGTCCACGCGAATCCTATAAGAATTGGCGATGGCGATCCTAAAAATTATAGTATTACTATCAATAATGTTGGCTCATCTGGTTACCAATTGAACACTAAAAAACTGAATACCGAAAGTATTGCTACCACTTGTCTATCGGACTCTGAAGACAGCTCTGATTCGAATAAACTAGAAATGGATATTGCATCTGCTATGAACGATCGAAAGACTCCGGAGAGCGTTAATTCTGATCATGCGACAGATGCGGCGACGACACAACTTTGGCAAGCATTGGCACGATCCGCTGccAAAAATAAAGAGGAAAGCCGAGCATCGCAATTATTGCGAAACATGATGAATCAAACTTTTGTATTTCCTGTGCCGCCGACTATAGCATTGACAAAAGTACCTGAAGAACCATTACCACTATTAAAGGATATGTCTGAATCTCAATCGAGTGTTGTCAAAATATGTAGAAGAAAGCAAAGTTTTCCTACAAAAACAGATTGCGTCGAGTCTCCAGATATTAAGGTGACCGATACTTTCGTTCGTTCCGAAAGTGTATCAAATACATTGACAGAAGGAATCAAAGACAAAAAGAGCTTAAAATGCAACAGCACTAGTGCTCTGCCTACATCACAGAAGGATATGTCTTGCTCGAATTGTGGAaccttaacaacaacaatttggaGACGTAGTGTCAGAGGTGAAATGGTTTGTAATGCTTGCGGATTGTACTTTAAGCTACATGGCGTTAATCGACCCCATTCAATGAGACGCGACACCATTCATACTCGGCGCAGGCGACCAAAAGAATGCGAGAAATCGAAGAAAAGAAACCGACAATTACCCTGCAATTCGGCGGTAGAGTATGAAACGCATAACAATAGTAGTCCCGTTGAATGCAAGAAGCTGGATTTATCAATAAATCAGGAAACACTCAGTATTTCAGATCTAGTATTTAACaaatacaAAACGGAATTATCTGAAACAGGAGGAGCGACAGCAACACTAAAAgatgttattttaaaacgaaaaaaatcaCAATCTTTGCCTGAGTTTAATGATACCTGCGAAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAacgccaaataa
Protein Sequence
MYNVPHKYRQVCRLCLTLVNECDIRDLQIYNSETSANETVGSSQHQLYVNQCNINENASKSNSKCVCNALDPNPNTCCCQCDNSLSAEQSNNPKPNPQHKNTNKNNYTPSVPSAIANPPCTIDNNNIMYACMFSNQSQNEVKITSEATNPIGQEEQQQFIPNNNNNKQQQQNDIVLYDNATKSSSATKHHVFHDIGENTSSNENYNQEHKDDSSPHITIQIFNCLSIKPLPNDGFPTIICRECRTKLESFSKFRNMALNSHLALREFVTISKSSKLDTSHMESKLDEILKSTSEAIAAKALTELSKSSKTRYSQRQPKLDGVLNSAKILERHVENNIRDIQTPLLYSNLFESPSLSQTSSNAIEREPIMIQDSNLMTARTATETVTTTKATIKTEKFFELDNGTAMNSKDPDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSAIVDTSIKSSVIKSKRPSIDNEMQDSVEIDLSVKKKKIEYSTERNVVAPTTATPATTRNTFGQPPILDVHANPIRIGDGDPKNYSITINNVGSSGYQLNTKKLNTESIATTCLSDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHATDAATTQLWQALARSAAKNKEESRASQLLRNMMNQTFVFPVPPTIALTKVPEEPLPLLKDMSESQSSVVKICRRKQSFPTKTDCVESPDIKVTDTFVRSESVSNTLTEGIKDKKSLKCNSTSALPTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNSAVEYETHNNSSPVECKKLDLSINQETLSISDLVFNKYKTELSETGGATATLKDVILKRKKSQSLPEFNDTCEGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00529226;
90% Identity
iTF_00523337;
80% Identity
-