Basic Information

Gene Symbol
srp
Assembly
GCA_035045575.1
Location
JAWNOV010000062.1:14912765-14925555[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-18 9.7e-15 54.0 2.0 1 35 991 1024 991 1025 0.97

Sequence Information

Coding Sequence
ATGACAAAGATCAGCAAGGGCAAGGAAAAGGATAAAAGTTCCGCCGTCCCGCGTTTATCTAATAATTTGCTGACAAATGCtgccaaaatgaaaatcaacaaaGCGCAGtcgaataatacaaaaaagcaAGCAGTGCAAAAGGGTACAGGCGAAAAGGCAACAGGATCAAATGCAACAGCCGCAGCATTCGGTCAAGCGCAACAGGCAGTTGTCGTGAAAGAGACGGCAATAGAGGCGCAGGAGAACAGCGAAGCGCCGACgccgacgtcgtcgtcgtcgtcgtcgtcgtcgccgccGTCGTCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCAGACATCAGTTGCCAGCGAAACAGCGAAGCAAACGGTTACGACGACACAAGCAACCGCACCAGCAACgacaacacaaatacaaacaacaacagcaacaacaacgacgatcTCTGCGACAGCGTTAAATGATTTTGTTTATGATGAGAATGTAAGGCAGTcccagcatcaacagcagatCAATAATAGTGACGTCACGAGAAGAATTGTTGCAGACGAAGCGGCTAATAATAATCAAGATAAAGTCGACTTTAAAACCGAGAGCGAGTCGAAGCtagagacaacaacagcagcaacagcaacaacagcaggagctataacaactgcaactagcgataaatattacaaaattgttgATAAGTGTAAAAGTGAGATAAGTGATGAAAGCAAGgcatcaataacaacaatagcaacaacaaatttgccGGTAGTAGTGATAAATATTAATCAGCAAAACGACGCGAGTGAAAGTGttgacaacaaaatcaaaagtgAAGCAAATGAGAAAgaacaaacagcagcagcagcagcatcagcaactacaacatcagcaacactaacaacaacaatagcaacaacatcgGCTGCAGCCAATGAACTACCGTTGCATTATCGCGGCCTAAACAATTCGGTAATTATAACCAaccatcagcatcagcagcaacagcaacagcagctgcagttgcaacaagcCGAACAACATCAGCAAATATTCGAGCAGCAACAATTCTTGCAACACCAGCTATtaagccaacagcaacaacaactgcaagtggagcagcaacaacaacacgccaCTTGGTTGGCCTACAACAATTGTGCCTACGATCTAACCAGCAGCggtgcagcagcaactgcagcagcggcaacagcaattgcatcCCAACAGAGcagtcagcaacaacagcaacagcagcaacagcaacagcaggagAAGAGTGAATTGTATGCATTGGCTGCCTCACAGCATTTGTTGCATTTCCCTTACCATCATCCGCATCTTTACGAGCAACAGCAcagcgccagcagcagcacggATCCCATAATGCGCAACAACTTTACGCTTTATGGCGTCTACGGTGGTGGGGgcggtggtgttggtggtAGCGGCATAACGCAATCCGCACACGATCATCAAttgcagcaacatgttgctgctgttgcagcagcggcagcggccaACTCGGTGATTGCACATACCACACACAGCACACCCAACATCGATGAGGTCATACAGGATACGCTCAAGGATGAATGCTTCGATGATCATCACAGCTCCAGCTATCATATGCTAACATCCGTATCAGATCTGCAAGTGCTTAAGGAGGCAAATGCAGCCATGTATATGACGCACGATCAGTtggtgcaacagcaacacctgCACCATCATCatttgccacagcaacaacaacagcatcagcatcaacagcagcagcatcaacatcatcatcatcacaatAACTCGGCCAGTTCGGTGGGTGGAGATTCACCCTCACCCTCGCACACGCTGTCCGCTCATGCCAGCGATGTGGCAACGCTGCAGAGTTTCACCCAACTAACAAGTGCACCACCAAGCAGCGGTCTACACAGAGATAGCTACGGCAGCCTCTCACCGGAGCATGCCAGCTATTTTAACACACAGCTCAGCCCCGTGCTGCAGAGCAGCTCTGTCTATGCAGGTCCTTTACTTGCATCGGCCGCCAATGGCATGGGATATGGTATGCAATCAGTGCCCTCGCCCACTcacatgcaacagcaacatcaccagcaccaacagcagcaacatcagcagcaacagcaacaacatcatcagcatcacAACTCCACAAGCAGCAGTCCGGGTCCAGTGGGTTTACTCCACACCAGCGGCTCGACAACCACTGGAGCAACCGGGCACAGCTCATTGCTGGACGATGGCTATGCATCGCCAAAGAGCAGCCACAGTGGCAACggtgctggtggtggtggtgttgttgAAACCTTACCACCTTTTAATCGCTTTGCAGCAGCCAGCGGTGGTGCTGGCTATGGCAACGGCGTGGCCAATGGATCTGGCACTAGCGCTGAACGGACTGGCTATGCATCGCTGACCAATTACCGCACACAGAGCGATGCCTGGTCAGGTCATTACGAGCCAGTTAGCTACGCGTCCAGTGCCAACAGCCAGGGACAGTTGGGTGGGGGCGGAGGCGTCGCTGCAATGACCAATGTGATACGCAACGGACGTGccgttgcagcagcagctgctgctgcagccgcTGTCGATGGCGCTGCCAGTGCTGGCGTTGATCCTTCACGTTTCTTGGCCAATGCCGCACATCTATCCGCATCGGCATCGTTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAGCTACCCATTTAACGTGGCCACAAGTAGCCGCAATAAGGCAGCATCCACAAATGCCAACAGCGCAGCCGGTTCCGGTGCCGGTGCCGGCTCAACGTCAGCGACATCGTCGTCAGTGGCTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCGAGACGTGCTGGCATGTCCTGTTCCAACTGCCAGACGAGCTATACATCGCTGTGGCGTCGCAATCCTGGCGGTGAGCCCGTCTGCAATGCCTGTGGACTTTACTTTAAGCTGCACAATGTGGTGCGTCCCTTGACCATGAAGAAGGACACCATACAGAAACGCAAACGCAAGCCGAAGGGAACAAAGAGtgaaaagtcaaagaagaTGCGTGCTTCACAGGCGGCTGCATTGGTTGCCAGCAATGTGAATGCTTGCCACAATGTGGCAATGCAATTGGAGAGCCACAATCAGCAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATACgcatcacagcagcaacagctgcagcagcaacagctaaaCACTGAGCAACATTCATCGGCGGCCAGCTCGCCCCAAAGCATGGTATCCTCCTCATTATCACCAAATGCAACAtcccaacagcagcaacagcagcagcagcagcagctctgTGCTGGGCTGGACATGTCGCCCACATCCTCGTATCAAATGTCGCCCATtaacatgcaacaacagcagcagcagcaacaacaacagcaatcatgcagcatgcaacatTCACCTAGCACACCAACATCAGTCATGTCACATTCCATTTACTCAACGCCATCGCCCACGCAActtcacagcagcaacaacaataacaataatacacTGTTTaatcataacaacaacaacaacaacagcaatgaaaataacaaacaaattatacaGAAATATCTACAAGCTCAACAGctgagcaacagcaacaacaacaacagcagcaacagcaacagcgatcAACAATTATTGGCACAACAGCAACTTATGCACCTGATGCCGAACTCCAttacggcagcagcagctgcagcagcagcggcggcggcggcgatCAACACGGCGATCAAATCGGAAGCGGCcaccagcaacaccaacaccaccagCAAACAATTGGCTGccataacaacgacaacaacacagACAACGGCATCGAACACACTATCCTCACTGAGtctcaacagcagcagcaacattatcAATCTGCCAAATCCCTATCAACAGCAGACGCTTGGTCAGACGGAGATGCCCTTGTGTAAGGCCGCTCTCAGCGGAAGATCCTCATCGCCTTACTATCTTAATCATCTGGCCGACGAGGAGCAACCAGCCATTATCAAACTGGAGCAATTggatcatcatcagcagcagcaacaccaccaccagcagcagcagcagcaacatcagcaacagcaacaagatgAAATGTTGCTCAGTCGCTCAACATCAATCGATGAGCACTATGAATTGGCGGCATATCatcgccagcagcagcaacaacaacaacagcagcagcaacaaatgttgcagcATGAGCACCAAATTACAAGCTATGCATTACACGCAGCcgcacaacagcaactacacgAATTTGGACGAAAATATGGCGTTGAGCGCGAGACTGTCGTCAAAATGGAATAA
Protein Sequence
MTKISKGKEKDKSSAVPRLSNNLLTNAAKMKINKAQSNNTKKQAVQKGTGEKATGSNATAAAFGQAQQAVVVKETAIEAQENSEAPTPTSSSSSSSSPPSSLATANLSSTFESKAQTSVASETAKQTVTTTQATAPATTTQIQTTTATTTTISATALNDFVYDENVRQSQHQQQINNSDVTRRIVADEAANNNQDKVDFKTESESKLETTTAATATTAGAITTATSDKYYKIVDKCKSEISDESKASITTIATTNLPVVVININQQNDASESVDNKIKSEANEKEQTAAAAASATTTSATLTTTIATTSAAANELPLHYRGLNNSVIITNHQHQQQQQQQLQLQQAEQHQQIFEQQQFLQHQLLSQQQQQLQVEQQQQHATWLAYNNCAYDLTSSGAAATAAAATAIASQQSSQQQQQQQQQQQQEKSELYALAASQHLLHFPYHHPHLYEQQHSASSSTDPIMRNNFTLYGVYGGGGGGVGGSGITQSAHDHQLQQHVAAVAAAAAANSVIAHTTHSTPNIDEVIQDTLKDECFDDHHSSSYHMLTSVSDLQVLKEANAAMYMTHDQLVQQQHLHHHHLPQQQQQHQHQQQQHQHHHHHNNSASSVGGDSPSPSHTLSAHASDVATLQSFTQLTSAPPSSGLHRDSYGSLSPEHASYFNTQLSPVLQSSSVYAGPLLASAANGMGYGMQSVPSPTHMQQQHHQHQQQQHQQQQQQHHQHHNSTSSSPGPVGLLHTSGSTTTGATGHSSLLDDGYASPKSSHSGNGAGGGGVVETLPPFNRFAAASGGAGYGNGVANGSGTSAERTGYASLTNYRTQSDAWSGHYEPVSYASSANSQGQLGGGGGVAAMTNVIRNGRAVAAAAAAAAAVDGAASAGVDPSRFLANAAHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKSYPFNVATSSRNKAASTNANSAAGSGAGAGSTSATSSSVASTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAALVASNVNACHNVAMQLESHNQQMDVNDEMKPLAYMSYASQQQQLQQQQLNTEQHSSAASSPQSMVSSSLSPNATSQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQQQQQSCSMQHSPSTPTSVMSHSIYSTPSPTQLHSSNNNNNNTLFNHNNNNNNSNENNKQIIQKYLQAQQLSNSNNNNSSNSNSDQQLLAQQQLMHLMPNSITAAAAAAAAAAAAINTAIKSEAATSNTNTTSKQLAAITTTTTQTTASNTLSSLSLNSSSNIINLPNPYQQQTLGQTEMPLCKAALSGRSSSPYYLNHLADEEQPAIIKLEQLDHHQQQQHHHQQQQQQHQQQQQDEMLLSRSTSIDEHYELAAYHRQQQQQQQQQQQQMLQHEHQITSYALHAAAQQQLHEFGRKYGVERETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00576003;
80% Identity
-