Dfal015555.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila falleni
Gene Symbol
-
Assembly
GCA_035045575.1
Location
JAWNOV010000171.1:1038712-1041028[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 5.7e-06 0.00043 20.7 2.1 1 23 78 100 78 100 0.98
2 15 0.00035 0.026 15.1 3.0 1 23 106 128 106 128 0.98
3 15 0.0064 0.48 11.1 0.2 1 23 133 155 133 155 0.98
4 15 4.8e-05 0.0036 17.8 0.1 2 23 176 197 175 197 0.97
5 15 0.0086 0.64 10.7 3.2 1 23 203 225 203 225 0.96
6 15 4.1e-05 0.0031 18.0 2.4 1 23 231 254 231 254 0.98
7 15 0.00094 0.071 13.7 0.2 2 21 472 491 471 491 0.93
8 15 9.6e-06 0.00072 20.0 1.9 1 23 505 527 505 527 0.99
9 15 6.6e-07 5e-05 23.7 1.7 1 23 533 555 533 555 0.99
10 15 0.0014 0.11 13.2 6.1 1 23 561 583 561 583 0.98
11 15 8.7e-05 0.0065 17.0 4.7 1 23 593 615 593 615 0.98
12 15 4.2e-05 0.0031 18.0 5.2 1 23 621 643 621 643 0.99
13 15 2.9e-07 2.2e-05 24.8 5.1 1 23 649 671 649 671 0.99
14 15 3e-05 0.0022 18.5 4.6 2 23 678 699 677 699 0.97
15 15 0.007 0.52 11.0 9.7 1 23 705 727 705 727 0.96

Sequence Information

Coding Sequence
ATGGATATAAGTTGCGTGAAGGTTGAGCCTGAGCAAGAGAATGAAACGTTATGGGAATCGGACTTGGGCGTTAATACTTCAGAGATCGACATAGGACCAGTTAAGATAGAGGCAGAAAATTCCACAGAGTGCCAGGCTCCGGTTCCTATCAGATCATATCCTATTAAAAGAGCGTCGAAGAAGAAGCATCCTCCAGCTGTTGCTACTGCTGTGAGACGCTCCAAGGTTTCCTATCAGTGTGACCACTGCCCGCGTCACTTTGAAAGAAGCGATGAGCTCGAGATACACACCCAGATTCACACAAACAATCTGCTTTACAAGTGTTCATACTGTCCAAACAGTTTCTCTCACAAATCCATATTTACGGCACACATGTACGTACATGGAAAGTTTCCCTATGAATGCACGGAATGTGCGAAAGGATTTTTGAAGATCAGCGATCTGAAGAAACATGCTCAAATTCATGTTGATAAGCGTCTTTCCAAAAGTCCATTACCACGCACCCATAACGGAAATCAACCCATTCAGTGTTCACAGTGTCCACGAAGTTTCATGAAGAGCGACGAACTAGAGATACACCTTCAGATCCATAGCGATAAACTTCCATACAAGTGTCCCTACTGCCCGAGCAGCTTTGCGCATAAGTCTATTTACCTGTCGCACATTTGCGAACACACTGGTGAATTTCCCTACAAATGCCATGAGTGCTCGCAAGGATTTATGAGGAGAATTGATCTTACCAGACATCAACAAATTACGCACTGTGATCAGCTACTCATTAATTCTCGACAACTGTTAAAGAGATGCACAAAAAGCTTGAAATCAGAATTAACAAATAATCTCAATAAGAATGACTCAATCAAAGTCAACAGCTACattaaaaagaagaaggaaGTGCAGCAGGAACAAAGTGAATCAAGCTCGCAAATGTCTGCTATAGAACCTATGACTAAAGGGGATACGGAGAATGATACGTTAAGTAGCCagaaattgaatataaaagaAGCAATCATACACAATAGTTGCATCAAACAGAaggaggagcaggaacaggaacaggaaaaAATTAGATTCAGTTTGCAGTCGACTTCTATAAAAGCTGAAGCTAAAACGGATAAGGAAAGTAGTAAGTTAATTAGTCAGGTACTGAATATAAAAGAGGAAATCATGGACAACGAACAAGAGAAAATAAAGTGCAGCTCTCAAAAGGATCCTGAGCATAACCAAATTGTAAAAGATGTTTTGGATTTTTCTTCGAATCAAGACAAGAAACAATGCATAGACTCGATACAACACAGTGACTTAGATAAGTTGGATGTTGAAGTATTACCGGCAGATGCTAATATTAAGCATAATGTGAATGACAAACTAGAGGAGCAGGCTTTAATAAATCCTGGAACAAATCCATCCCAAATGTGCAAGATCTGCAATAAGGAATTCAAGAGCGTTGAAGATTTGCGCTTGCATGAAAGATGCTATACACATTCGAAAAGACAGTTGGGTGTCCGGCCGTACAAATGTGACCGCTGCTCGATGTCTTATACGCAAGCGTTCAGTCTTACGGTGCATATGCGCAAGCATACGGGAGAACGTCCATATCAATGTCCTCACTGTCTGCGGACTTTCATACGGAACTCGGGTCTGAAGGTCCACATTCGACAACACTCCGGCGAGAGACCTTATAAATGTGCTCACTGTCCACGTACCTTTGTCAATCACTCAAATCATAGAAAACATATGGTAATCCACGCTACGGATGTGGCCAGAAATCATCCTTACAAGTGCTCACACTGCCCCAGGACTTTTGCACAAAACTGCCAATTTATTACACATGTTCGCGGACATACCGGTGAACGTCCCTATCAATGCACACACTGCTCCAAGGGCTTTAAAGTGATTCATGATTTAACGAAACACCTACGCAGTCACACCGGAGAGCGTCCCTTTAAGTGTCCTCATTGCCCGAAATCCTTTGCTCAAAACTCACATTACCATGCGCATATTCGTGTACATTCCGGTGATCGACCTCTACAGTGTCCACATTGTCCGTGCACCTTTTTCAAGAGCTACAATCTGAAAGTTCATCTTAACACCCATACAGGAGAACGGCCCTACAAGTGTCCACACTGTCCAAAAACATTTACTCAGAATTCTTGTTGTAAGGCACACGTTTGTGAACATCAatcaagcaaataa
Protein Sequence
MDISCVKVEPEQENETLWESDLGVNTSEIDIGPVKIEAENSTECQAPVPIRSYPIKRASKKKHPPAVATAVRRSKVSYQCDHCPRHFERSDELEIHTQIHTNNLLYKCSYCPNSFSHKSIFTAHMYVHGKFPYECTECAKGFLKISDLKKHAQIHVDKRLSKSPLPRTHNGNQPIQCSQCPRSFMKSDELEIHLQIHSDKLPYKCPYCPSSFAHKSIYLSHICEHTGEFPYKCHECSQGFMRRIDLTRHQQITHCDQLLINSRQLLKRCTKSLKSELTNNLNKNDSIKVNSYIKKKKEVQQEQSESSSQMSAIEPMTKGDTENDTLSSQKLNIKEAIIHNSCIKQKEEQEQEQEKIRFSLQSTSIKAEAKTDKESSKLISQVLNIKEEIMDNEQEKIKCSSQKDPEHNQIVKDVLDFSSNQDKKQCIDSIQHSDLDKLDVEVLPADANIKHNVNDKLEEQALINPGTNPSQMCKICNKEFKSVEDLRLHERCYTHSKRQLGVRPYKCDRCSMSYTQAFSLTVHMRKHTGERPYQCPHCLRTFIRNSGLKVHIRQHSGERPYKCAHCPRTFVNHSNHRKHMVIHATDVARNHPYKCSHCPRTFAQNCQFITHVRGHTGERPYQCTHCSKGFKVIHDLTKHLRSHTGERPFKCPHCPKSFAQNSHYHAHIRVHSGDRPLQCPHCPCTFFKSYNLKVHLNTHTGERPYKCPHCPKTFTQNSCCKAHVCEHQSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-