Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_035045575.1
Location
JAWNOV010000032.1:104405-107762[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.18 3.5e+03 -2.2 1.4 58 76 52 70 27 110 0.48
2 3 1 2e+04 -4.9 3.8 60 108 86 140 54 156 0.48
3 3 1.9e-98 3.7e-94 314.8 11.5 2 218 344 552 343 552 0.92

Sequence Information

Coding Sequence
ATGAGGAGCATGTTCCGTCCGATAAAGAAGATTTTCACGTACATTCAAAAAAATGCCAGCAACGGGAAAATGTTTGGCAGCACAAATAGCATAAACactgatgataatgatgatgtcgCAAGTGGCAGCAATGCCATCAAGCAGGCGCCGAAGGAGGAAGAGCAGGAGGAGCAACAGCTAGACAAGGAGCAAAAACATAAACTGGAAGTGGAACTGGGACTGGAACTGGAGCACGAAGATGATGATATTGAACGTCAAATAAAAACTTCAATTATCGATGCCACAAAGGTGCTTGCAACTAAATCGAAAATTATTTTGccaatgcaactgcaacttgatGATGAGCTGGCGGATTTTGCACACGAACCTGCAACGCTAACGGATGAGGAGGTTGACAATGATAttgatcatgatgatgatgatgttgttgttgaactgGATGAACAGTATCTGGAGCTGGAAAATTATCCAAACAATGAGATTATTGTGCTAACTGATAATGAGCTTAATTCATCGCTTGCCTCGGATAACATTTCGGAGGATCCTTTGGCCATTGATGAGTTTACACAGCCGACGGAGCAGGACAATGAGGAGGAAGAGATTGAAAATAATGGTGAATTGCTCTGGCTAAAGCTGGACACGCCCATGCCGGCgatggcggtggcggtggcaacCAGCAATAGTGGTAATGTGGATGACATTGTCATCACAGCACCGCCTGTAACTGCATCGTCAGCTAAGGTGCCCTCAAAGACCAAAGAGGAGGAGCTGCTGCGTAGTGATGGTGGCTCCGATTCTGGATTGGGCGGTGAAAACGACAGacacaatacaacaacaacaacagcaacaacaacggaagCTCCTCCAGGTGAAGCAACAACCACCTTGCAAAAACCACTGCGTTCCAATTTGAAGCGTCGTCTGGAGGATGATGAACTGTCTCTGGTGCCCGACATGAACAGCAGTTCCACCTCCTCCACCTCCGCCTCCACCGCAACCTCCGTTTGTCTGTCCAGCGCACAGAAACGCGCCAAGCGTTCCATTAACTTTGATAGCGTCAAAGTGTATTACTTTCCCCGCCAGCAGGGATTCAATTGCGTGCCCACTGCCGGCGGTTGCACCCTGGGAATGGGCGCCCGGCACATTGCCTTCAAGACTATGACGCTGGCGGAGCATGCAGCAGAATTAAGGCGTGCCCATCGCAGCCAGAATCAGAgccaggagcaacaacaacagctgcgcATTGGCGGCTCCAGCAGTGATGATAGCGAGGAATCCGAGGAGGATTATCTAAGCGAGGGCAGTGGCTCCGACGCCGACGACGGCTCCAATGGCTTCCTGCAACCGGTGACGCCAAAGCAGCGACGGGCGCTCCTCAAAGCCGCCGGCGTGCGAAAGATCGATGCGAGTGAGAAGATCGATTGCCGGGACATACGTAACTCACGCGAGGTGTGCGGTTGCTCCTGTCGCGAGTTCTGCGATCCAGAGACTTGTGCATGCAGTCAGGCGGGCATCAAGTGTCAGGTGGATCGGGCCATGTTCCCATGCGGTTGTACACGCGAAGCTTGTGGCAACACCGTCGGGCGTGTGGAATTCAATCCGACCCGTGTGCGCACCCATTACATCCACACGGTGATGCGTCTGGACATGGAGCAACGTCAGAGTCAAGGACCGCCAGCTGCGAGTGGCAACAGCTTGATCTATTCCAACAGCAGCGTTGGCATTATTTCACCCggggctgctgctgctgccgccacatccgcctcctcctcatcctccACCACCTCCTCGCATTGCTATTTCATGCAGCCGCAGTCCAACTACAGCTCCGGGTATGCCTCGCCAGCTTACACGCCCGAACCGAGTGTCAGCTActatcagcagcagcaacaacaacaacagacgcAACAGGCGACTGTCGTCTCACCTCTTGCTACCAGTTATCCACAGCTGGACAGCTTGGATTCTGGTCTATTTGCCAGTGGTAGCAATGCCACACCCTCGTATGGTGAGCTACTGACGCCCACCTATCATCAAACCCTTGGCTATGGCAGCGCTCAGCTCAATTCCTACACTGGTTACCAGCAGACGACATCAACATCCGGCGGCAACGCATCCCCCGGAGCGTATAGTTCGTGTGCGGTACCatcggtgccaccatttggcAACGCCACTACCACCGCCTCGAATGCAACGCAATATCAGCATGTGAATGCGTTGGAAACAACCGCATCCTCAATGaatgtcaacagcagcagtggAAGCAGCAGCATATCCGTAACGGCCAGCAATTGCTCCGCGGGATTGGTGCGTCTCAGTGGCGCAGTTGCAGCTGATTTCATTAGCCTGAACACGCCCATTGGCAGCTCGTCGCGTCTCTCGCAGATTAATGATCTGTTGCAGCACAATCGTAATGCCACAAGCGCTCTGGTGGCCGTCTCCGAGTCATATACCACTGTGcgaaacagcagcagtaatAGCAGCAGCACTATTGATTCTATCGACACGCCGCCCATTATGGAGGAGGCGCAGCGCAGCAGTTGCATGACCTTCGAGGAGTTGCCACCGCCGTTAATCAATCCCACGCCCATTGTGGCCGTCGTGGAGCATAGCGAACGtaagcaacagctgcagcaggtGGTGAATTCAACACCACAGCCTCGTCAGCCACTGGATACAAGTGGCAATCTTACCGAATCCTTGACGAGCGATATTTGA
Protein Sequence
MRSMFRPIKKIFTYIQKNASNGKMFGSTNSINTDDNDDVASGSNAIKQAPKEEEQEEQQLDKEQKHKLEVELGLELEHEDDDIERQIKTSIIDATKVLATKSKIILPMQLQLDDELADFAHEPATLTDEEVDNDIDHDDDDVVVELDEQYLELENYPNNEIIVLTDNELNSSLASDNISEDPLAIDEFTQPTEQDNEEEEIENNGELLWLKLDTPMPAMAVAVATSNSGNVDDIVITAPPVTASSAKVPSKTKEEELLRSDGGSDSGLGGENDRHNTTTTTATTTEAPPGEATTTLQKPLRSNLKRRLEDDELSLVPDMNSSSTSSTSASTATSVCLSSAQKRAKRSINFDSVKVYYFPRQQGFNCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRSQNQSQEQQQQLRIGGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGPPAASGNSLIYSNSSVGIISPGAAAAAATSASSSSSTTSSHCYFMQPQSNYSSGYASPAYTPEPSVSYYQQQQQQQQTQQATVVSPLATSYPQLDSLDSGLFASGSNATPSYGELLTPTYHQTLGYGSAQLNSYTGYQQTTSTSGGNASPGAYSSCAVPSVPPFGNATTTASNATQYQHVNALETTASSMNVNSSSGSSSISVTASNCSAGLVRLSGAVAADFISLNTPIGSSSRLSQINDLLQHNRNATSALVAVSESYTTVRNSSSNSSSTIDSIDTPPIMEEAQRSSCMTFEELPPPLINPTPIVAVVEHSERKQQLQQVVNSTPQPRQPLDTSGNLTESLTSDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00585186;
90% Identity
iTF_00522947;
80% Identity
-