Basic Information

Gene Symbol
-
Assembly
GCA_035045575.1
Location
JAWNOV010000014.1:2886163-2887157[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7 1.2e+04 -3.1 0.0 29 43 51 65 26 88 0.57
2 2 1.3e-09 2.4e-06 28.0 0.0 23 89 150 208 133 208 0.83

Sequence Information

Coding Sequence
atgattaatattCGAGAACAGCTTCGGTGCGGTAGAAAAGGATGTAGGTACACCACAAACAGATCGTACAATCTTGAGCGGCACGAACGCAACCATGAGAAAGGCAAGGTACCGGTATCCCGGTGCCAACCATGCCCACACTGCACATATGCCGCCGGATCACTACACAACTTAATGCGACATATTAGCAACAAGCATGCAATGTTAAGCATAAAGAAGCAAAAGCATCAACGACCGTGCAGTCAAGCAAGGCATCAGAAGGAAGAATTGACGTCGACAGAGCGGTCCAGAatagaagaaagagagagtgaagaATATAAAGAAGAGAACCCAGCGCAACAGTTATTGACCTTTGACAATGAACAGCATTTGCGGCCCTCGCATTGGTATTGGAGCACGCCGCAGCAACAAGAGAAGAATTTTTTTAGACGTAGTGCTCTAAGTGCACAGTGTAAGATACTCGACCGGACCATCAACATGTTCAAatgGTACTCATTGGTAAAAGCAAGGGGAGGAGCTCTTAATGTGGATGATTGGGATGATGTTGGGGCAGCCCTGGGGCTTCCACAAGAATCAGGTCGACATCTTCATGCCAAGTACATGGATGTGCTTTTTGAATATGAGAAAGATGAGGAGGAGCGCTTACAGAAATGTCGGAAAGTCGAAGGTGTTCCCGTTTGGTGGGATGATGGTGATTTTATTACCGATAGCGACTGTTGTACGCTAGAGGATTCATGGTGGTCAAATGAGGAATGTCCATCACTTAATGTTCAAAATGCCATTgttgaaatgatttttaatgagTATTATTTGAATCATTTAAAGAACAGCAAACTGTTCAAACGGTTTTACGTAAAGGACTCGTGGCTTTGGGCCACAATGCTTAACTATCAAGCGCTAATAAgccaaatgaattttaaacattataCTGATTCTTGA
Protein Sequence
MINIREQLRCGRKGCRYTTNRSYNLERHERNHEKGKVPVSRCQPCPHCTYAAGSLHNLMRHISNKHAMLSIKKQKHQRPCSQARHQKEELTSTERSRIEERESEEYKEENPAQQLLTFDNEQHLRPSHWYWSTPQQQEKNFFRRSALSAQCKILDRTINMFKWYSLVKARGGALNVDDWDDVGAALGLPQESGRHLHAKYMDVLFEYEKDEEERLQKCRKVEGVPVWWDDGDFITDSDCCTLEDSWWSNEECPSLNVQNAIVEMIFNEYYLNHLKNSKLFKRFYVKDSWLWATMLNYQALISQMNFKHYTDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00522740; iTF_00575360;
90% Identity
-
80% Identity
-