Basic Information

Gene Symbol
Arid2
Assembly
GCA_035045725.1
Location
JAWNOU010000076.1:4033535-4039711[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.7e-25 1.9e-21 76.4 0.0 2 89 94 180 93 180 0.93
2 3 9 2e+04 -8.7 7.2 63 84 1098 1120 1073 1120 0.50
3 3 8.2 1.8e+04 -3.7 0.0 28 65 1620 1659 1609 1671 0.70

Sequence Information

Coding Sequence
ATGACGTCCATTGATAATGTACGTGTGCTGTTGCAGTCTTTGCCAGCAGCATCGCCTGCCgtcggcaacagcaacaacaatgcacagCAAAATGAGTCGACGCCGGCTAAACTTGGCGCTGCTGCAACACCATTGCGCGCGAGAAatacacagcagcagcaacaacagcagcaacagcagcagcagcagcagcagttgcaagcACAACCACAATTTTTTTATGGCACGCCGGAAAAATCAACAACTGGGGCCAGTGTTGGTGGAAAGCAGCTCAGGGCGCCGGAGGAATTCTGGCGTGATCTGCACCAGTTTCATGAGCGGCGCGGCACTCCGCTGACACAGGCCGCCAAGATTAGTGGTCAGCATGTAGACTTATACCAGCTGTACCAGGAGGTCACGGAGCGCGGTGGCTTCAATAAAGTGAACATGCGCGATGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCTGGCATTAAGCATATCTATCGTCGCTATTTGGATAAATACGAGCGCCTGAACTTCTTGGGTGAAGATCCCGACAAGCTGGAGGCCTTGGAGGCGGTCATCGAGTGTGCTGATTTGGGCGCCAGCGCCAGTCGTGCGCGTTCACGTGCcttgggcggcggcggcgttgggGGTGTAGGTGGCAGCTTAACTGGCGGCGGCTGGGGCAGCATTTTTGGCATGCCGCACTCCACACTGACGGCCGTGCCCATGGCGTATAACCAGCGCCAGCATATGGTGAATGCGGATCGCCGACGACAGTATAAAATGTCCACACAGCTGCACAAGCACAGCAGCTATGAgaagctgctgttgtcgcttaTCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACGCTGATGGCGAATGAGCAGCGTCCAACGCTGCAGCTGAACGAGTGCCCAAAGCTGTTGGATGTGCTGCTGGCACATTTGGGCGTCTATGCGGACTACAGCATGCGTCAGCTGTTCCAGCATGGCCACAACAATGCCGGCATGCAGGTGCGACGTCACTCGAAGCTTAATTTCTGGCGGGATTTGCTCTACGATAAGCCACAAATTCTGGACCTCTACACGGACGAACAAGCCTGGCTGGACAATGGACTGATCAACAAGGAGAGCGACGCCTGCAATGATTATCTGTTTCAATCGGATGAGCTTGATTTCGAGCTggactttttaaatttacgtCGCAGTCATGGCACGGATGAGCGCATTGGCCAGCGTGTGCTGCAGATTGTGCAGCTATTACGCAGCTTGAGTTTTCATCAGGACAACGTTACGCTGCTCGCCTCGAATCGTACGCTCTGGCGGTATCTGGTCATGGGTGCCAATGTTCGTTGGAGCAACATACACATTCAGGCTCTGGAGACGGCTGGCAATCTGGCGCAGCAATTTGACCTGCTGGATCCCGCCACGGACGAGCTATCGCGCAATCTGCTAGCTACTCTGTGCGAGGGCGTCGAATCGAATGATCGCGCTGTCATCATCAGCTGCCTAGAGATACTCTACAAACTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGTCTTGGCTTGGACTTCTACCAGCGTGTGATGCTGTTGCTCTCGCTGACCGATGTGATGCTTTTGATCTTCACGCTGGAGGCGATCTATGCGTTGAGCTCTTTGGGCGCGCGTCCCTGCTCGATGTTGATGCAGGTGCGCGGTTTGCTGGATCAGCTGGTGGCCTTGCTTACCGTCGAGGCGCAATCATATGGCGCGGCTGGCTGCATATTGATGCGCGTCGTGGAGGTGGTGCCGGGTAATATGTTGTCCACACTGGCACAGACCATACCGGGCACTCAAATGACACAACTGATGACGGtcaagcagccgcagcagccagcGCCGATTGCTGCACTGCCGCCGCCAGCGCCAACACAGGTCCAAGTGCTACCGCCACAGCCAGAGACCGTTTCTGTGCCAGTGCCTACGTCTGCTCCCACGACTACGCCCGCGCCCGCCGCTGTGTCCCTGCCTGTGCCTAGTTTGCCGCAGGTCCAGCTGCCTATGCCCAGTTTGCCGCAGGTCCAGCTTCCGCCACCGCCAACCCAACAAGTATCGATGCCTGCTCCAGCAGCTGGCACAGTTGTGCTGCCTGGAACGCTGCCCGCAGCGCCCTCTGCGCCGCAAAGCTTTACCCATGATGATGAGACCTATGCGCTGGCCTGGCTGGGTGCCACCTACGAGCGGGCCGGCAATGGTCATGAGTATCGCGTAGAGCAACAGGAGCTGTACACCATTTACCTATCGCACTGCCAGAAGGCGGGCAAACTCTCGGTGGTCAATCGACTGCAATTTCCGCGTCTCGTGCGGCTCATATTCAATGCGAGCGTGGGTCCAGCCATTGTGCGCCAGATGGACGGCACCGATCTGCCTGGCACGCACTATGTGGGCATAAGGATGCGTGCTCAGCCTTTGcccatgcagcagcagcatcagcaacaacaacaacagcagcagaaggcagcagcaacggcgacagcaacagctgccaaaaaGGAGCCAGCGCTGGCGCTCAAATCAGAGACAACAGGCGTAGACGCATCTGATGAAGCTACAGGTACACAAACGCCCAGCTCCTCGCTGATTAAGAGCCTGCTGGCAAGTAAAGTTAACGAGCGGCAGCTGAAACAAAAGGCCCAGGCCCAACCGCCTGCGCTGGTGGCCACCACAGCCTCAGCCACGGGCTCCCCGGCCAGCCAACCCATTAAGGTGACCTCCACGGCAATTAGCGCCTTTGTCAACAATCCGCTTATGCAGCACACGCCCGTAAAGGTGGGTCAAACCACCATAAAGCCGTTGCATCCGCAGCTGGCGCTGGAGAAGAAGCCAATGACGGACtcagcgccgccgccgctcgCACCATTAAGCGGCTCCAATGTGCTTACGAAGGATGCGCAAGGACGCACCGTAATTATACAATCCAAACGCAAACTGACCATCGATGAGGAGCAAAACAAGCGACTGGCATTggatagcagcagcaacacgccCGCTGGCAAGGATGAGCCGCAGGTGACGCCCTCTAAGAATGCGGCCAATCTCTACGCAGACTTGGCTGCCTCGATACTAGAAGATGAGGATTTGGACGATGTGCCGCCGCTGGCAGCGTCCAgtcaagagcagcagcagacgactctgcaacaacagcagcaacaacagcaacaacagcagcaacaacagcaccaacatcagcagcaacaacatcagcagcaacatcagcagcagcagcagcagcatcagcagcagcagcagcagctcaacaacaactacagctcATACCCGCAAAGGTGCAGCCCGCACAGCGTCAGCTCATCTTTCCCGGGCTTGCAAACGGTCCCGGTCATATTGCAGAAGacagagcaacagcaacagcagcagcagcagccgacgCAAACACAATATGTGCTGGCCACCAATCAGCAGGGACAGACGTATCTGGTGGCACAGCAAACGGCGccagtggcagcggcggccAATGCgccggccacgcccacgctaTTGGTTACTCAAGCGGCGCAGCAGCAGACCAAAACAATAATCATATTGCAACAGCCGGGTGTCAGTGCCAGCAATGTGCCCGGCACACAGAAGGTCATAATGACCACAGCGCAGGGTCAACAGGTGCTGGtgacaacaaccacagcgCCTGCGGTCGCCCAGCCACGGCCCGCCGCACAAGTCCaacagcagttgcagcaacagcagcaaatctTTCTAAACCCGCAGCGTGCGGTGCCCGCCGCCTTAGGTGCTGGTCAAATGTCACCCTCGCTGCTTTCGCAACTCAATCAGATACCCGCCACTATTAAGCTGCATCAGCCGCAGCCGTCGCAATCGCCGCAACTGCATCGTGGCGGCATTGTGGCCACCAAGACAGCGCCCAtaccgcagctgcagcagcatcagtcCATTATACAGCAGCATATCATCTCCGGcccggcggcagcggcagagaagcggcagctgctcctgGGCGGCATTAAGGAGACAACGCTCATCACACAAACGCCTGCCACGGCTGCCCCACTGCAGCAGAGTCAACTCAACTCGCAGACAATCATTACCACACAGCCGccggcagctgccacagcggTTGCTGGCcctgcactgcagcagcaacagcagcacatacgcagcgtgctcgagcagcagcagcagcatcatccaTCCATAATACAGCAGAAGATAACTATGCCCACAGTGCTAACGGATACGGTCAAAGCTAAAgctgcgccagcagcagcaaccattGCCAAGAAGCCGATGGCTCCGCCAACGCCGTCGATGcctgtgcaacaacaacagcagcagcaggtgcaaATGCCTGCGCTGAAACCTACACAACAACTTCAACAACAAGCGCAGTTAGTCAGCAGCGAAGCGAAGCCCAGCATTATGATTGAAGCCAAGCCGGTGGAGCAATctacaataacagcaacagcaacagttgcagcaatgccagcagcagctgccacagcaatTGCTTCTAccactacaacaacagcaacgagcATTGTTAGCAATAgcaatgcaacagcagccggagcagctgCCAGCGCAGTGCCCGTGGATGTCAATTGGCTATTCATTTGCGATTGGCGCAATTGTCCGCGGCGCAAATTCAAATCGCTCAACGAGCTGCAGCATCATGTCTGCAATGTGCATTGTCCGGATCATTTGGATTCCGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGTCCCAGCTTGTGTGACAACATAGCCCGTAAGCGTTACTCACTGATGACGCATCTGGTGGATCGTCATTTGGCGCTCGATGATCTGCGTGCGAGCGTGCAGCGTCGCCTTGCCACGGGCATACACAATGTGGCGCCCACCCAGCCAACGGTCACAATTGTGCGCAATGTGGGCAATGCCAGCAATGCGCCAGCatcaacagcggcaacaacagctgctgctgcgccagcGACAACGGCCACGGCTGTGGGCACCTCGGCACTGCAGGCAATCAAACGACATTCGGCCGATTTTCTCAACTCCAAGGAGCTGTTGGATGAGAACGAGGGCCCAGTAACAAAGAGCATACGCCTCACCGCGGCACTGATATTGCGCAATCTGGTCAACTACACATCGACGGCCAAGCGCAGCCTCAAGCGGTATGAGCCGCATCTGGCCAATGTGGCATTTAGCAATGTGGAGGCCAGCGGCGTCCTCTCCCACATACTGCACGAGCTCAGTCAGTAA
Protein Sequence
MTSIDNVRVLLQSLPAASPAVGNSNNNAQQNESTPAKLGAAATPLRARNTQQQQQQQQQQQQQQQLQAQPQFFYGTPEKSTTGASVGGKQLRAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYQLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAVIECADLGASASRARSRALGGGGVGGVGGSLTGGGWGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEQRPTLQLNECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINKESDACNDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQDNVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLAQTIPGTQMTQLMTVKQPQQPAPIAALPPPAPTQVQVLPPQPETVSVPVPTSAPTTTPAPAAVSLPVPSLPQVQLPMPSLPQVQLPPPPTQQVSMPAPAAGTVVLPGTLPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKLSVVNRLQFPRLVRLIFNASVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPMQQQHQQQQQQQQKAAATATATAAKKEPALALKSETTGVDASDEATGTQTPSSSLIKSLLASKVNERQLKQKAQAQPPALVATTASATGSPASQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDEEQNKRLALDSSSNTPAGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQQTTLQQQQQQQQQQQQQQHQHQQQQHQQQHQQQQQQHQQQQQQLNNNYSSYPQRCSPHSVSSSFPGLQTVPVILQKTEQQQQQQQQPTQTQYVLATNQQGQTYLVAQQTAPVAAAANAPATPTLLVTQAAQQQTKTIIILQQPGVSASNVPGTQKVIMTTAQGQQVLVTTTTAPAVAQPRPAAQVQQQLQQQQQIFLNPQRAVPAALGAGQMSPSLLSQLNQIPATIKLHQPQPSQSPQLHRGGIVATKTAPIPQLQQHQSIIQQHIISGPAAAAEKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPAAATAVAGPALQQQQQHIRSVLEQQQQHHPSIIQQKITMPTVLTDTVKAKAAPAAATIAKKPMAPPTPSMPVQQQQQQQVQMPALKPTQQLQQQAQLVSSEAKPSIMIEAKPVEQSTITATATVAAMPAAAATAIASTTTTTATSIVSNSNATAAGAAASAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPTQPTVTIVRNVGNASNAPASTAATTAAAAPATTATAVGTSALQAIKRHSADFLNSKELLDENEGPVTKSIRLTAALILRNLVNYTSTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00528580;
90% Identity
iTF_00530738;
80% Identity
-