Basic Information

Gene Symbol
grh
Assembly
GCA_035045725.1
Location
JAWNOU010000052.1:8540608-8572840[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.24 1.6e+03 -1.7 3.6 74 110 204 241 141 284 0.59
2 3 3 2e+04 -5.5 1.8 99 99 508 508 488 523 0.45
3 3 3.8e-63 2.5e-59 200.4 0.5 24 221 639 831 625 833 0.94

Sequence Information

Coding Sequence
ATGCAggatgccagcagcagctatgCCATATCCTACACAGACTGGATAGCCGAGTCACGacgcagcgccagcagctaCAGCCTGGACGCACAGCAGCCAACgccaacgcagcagcagcagcaggagcagcatctgcatcatcatcatcctcatcagCCTCATCagcctcatcatcatcagcctcagcctcagcctcatcatcatcatcaggagcagcagcatcatgcGCACTACTTTGAGCCCGCCAAGCATGATGCACTGCAACACCTGCCGCTGACCGCCGCCGGGCTCATGCAGTCGGTGGCCGCCGAGATACAATTGAGCGAACAGCAGCCCACGCCGCCGCCCACAGCCAACGAATCCGCCGCCGATCCCGTGGATGCCCCTCAAGCCTATGCTGTCTACAGCTACTACAGAGATGTCGatgccgagcagcagcagcagcagcaggagcaggaggagcacaatgccagacagcagcagcagcaacagctcgtGTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCTTCGTCCGCCACAACCGGCGTGGTctccacaacaacaatctcaaatcaacagcagcaacatcagcagcagcagcagcagcaacaacaacagcagcagcatcaacagcagcagcaacagcagccgccacaTCCCAGCGACATTGTAACCATAACCACCGCGGGCGTGGGGAGCGCGGGCTCAATTGTCTCCgctgcagtgcagcagcagcagcagcagcagcagcagctgctgagcaTCAAGCGTGAGCCCGAAGACCTGAGCAAGGATCCCAAGAACGGCAGCCTGGGCGCCTCGGCAAATGGTTCGGTCATAACGCAGAAGATATTGGGCGTGGATGCAGCTAGAACCGAAGCTgaggcaactgcaactgcaactgcaactgcattcGAAATAGGCAAtaaaacagctgcaacaacaactgcaacaactgcaacaactgcaactgcaactagTCCCGCCAGAGCGACAGCGACAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACACCAGCAGAGCAGCAATGGCGCCAACACACAGCAGAGCACACTGCAAGCGCAAAGTCCCAGTCCCGGGCCGTATATCACAACGGACAGCTACGGCATGTATACGGCGAGCAGGCTGCCGCCCGGCCCACCGCCCGCCACCACATTCATAACGGAGCCCTATTATCGTGAATATTTTGCACCTGACGGCCAAGGCGGCTATGTGCCAGCGGGCACGGCGCGCAGTCTCTACGGCGAGGACGTATCCGTTACGGCGGCCACGCAGCCGCAGCCCGTGGGCGGCGTCTACGAGGCGCGCTTCAGCAGCAATGCGCCCACCACCACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcaacagcagcaacagcaacaacagcagcagcaggaacagtcGGGCAAAAGCGGCGGCACCCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTGGACTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAGAATCACATACAGCAgTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTGATCGATGCCAATGGCAGCATACCCGTTTCGGTGAACAGCATACAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACCAGCACAAATGGCTCGACTCGCTCGCGGCCCTGGCACGATTTCGGGCGCCAAAATGATGCtgacaaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGGCGCGAAGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGaGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGatACAAAGAACTCGGTTGGTCTTGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTATTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAAAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGGGACGCGACGGTCTTCCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGCAAGACGCGCGACGAGGAGCGCCGCGCGGCCAAGCGCAAGATGACAGCCACCGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCCGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAACTGAAGGGCGCCTCGCCTTTCTTGCTGCACGGCCAGAAggtggccacgcccacgctcAAGTTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAGAAGGATCATATCCTGGATCAGAGCATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCGCCGATGAAGCGCGGCCGGATGACGCCGCCGACCACGGAGCGTGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGCTGCACGTGGTGCCGCCGACCACAATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGACGATGACATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAA
Protein Sequence
MQDASSSYAISYTDWIAESRRSASSYSLDAQQPTPTQQQQQEQHLHHHHPHQPHQPHHHQPQPQPHHHHQEQQHHAHYFEPAKHDALQHLPLTAAGLMQSVAAEIQLSEQQPTPPPTANESAADPVDAPQAYAVYSYYRDVDAEQQQQQQEQEEHNARQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISNQQQQHQQQQQQQQQQQQHQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQLLSIKREPEDLSKDPKNGSLGASANGSVITQKILGVDAARTEAEATATATATAFEIGNKTAATTTATTATTATATSPARATATDLEMYATTGGTQIYLQTSHQQSSNGANTQQSTLQAQSPSPGPYITTDSYGMYTASRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTAATQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00526343;
80% Identity
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