Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_018153835.1
Location
NW:563761-573446[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.7 6.7e+03 -3.0 0.1 5 17 29 40 27 46 0.55
2 3 1.4e-07 0.00014 21.5 0.0 4 38 309 346 306 347 0.86
3 3 6.1e-09 6.1e-06 25.9 0.3 3 43 408 453 406 455 0.81

Sequence Information

Coding Sequence
atgatgatgaagatgcGACTAGACCTAAACGTGGCCTGTGTGTTGGCATGCCTCCTGCTGGGCGTCTCTGGTGCCAGCGCCTGGCACTCTGAGGAGCTGGAAATCTTTGATTTGGTCGAGGAGGTGAACCGAAACTTCTATGAGTTCATGGGCATCAATCAAACGGCCACGGGCGCTGAGGTTAAGCGCGCCTTTCGCACTCTGTCCATTGTCCTGCATCCAGATAAGAATCCAGCCGAGGATGCCAACATTCAGTTCCGTAATCTCGTCTCCATCTACGAGGTTCTCAAGGATCCTTCACGGCGTGAGAAATACGACAGAGTGCTCAAGGAGGGCATGCCCAACTGGAAGTCAGCTCTCTACTATTACCGTAGGATGAGGAAGATTGGCCTGTATGAGGGCGCCTTCATCCTCTTCCTGATCACCACCGTGGGACAGTATCTGTTTGCCTGGGCCGCTTACCTCGAGAAGAAGTACACCGCCGAACAGGTCTTTGGCACCAAGCTGAAGAAACTGcagaagaagaacaaaaacatTGACATGGACGTTATTCTTAGCGAAATACCGATGCCATCACTTCTGAATACCCTGCCCATTCAGATCCCTTTGGCATTGTGGAACCTTCCACGTACGATTAAGAATGGATTTAGCAAGGCCAACGAGCTTAAGGAACTGGCATTGGAGAAACGCAGGCAAGAACTGGAGGCTGCCCGTCGCCAAGAGGAGCTGGAGCGAGAGGCCGAGGAGCAGGCACGTCTGCGCAAGGAGCACAAGGAAAACTTGCGCAAGCGCAAGCAGAACAGCAAGGCGCCGGAAAAGACCGAGGAGGAGTTGCGTGGCTACTCGCAGATTCAGGCGCGAGAATTGACCGATGAAGATGCTGTTCGTCCGGCTTCCCAGAAGAGCACTGTGAGCGGTGGCTTCTGGACTGACGAGGATCTCACCGAACTGATTCGCCTGGTGAAGAAGTACCCAGGCGGAGCTGGTAGTCGCTGGAACACTATAGCTGAATCCATGAATCGCAGCGTGCAGGAGGTAACCTTCATGGCGGCTAAGATGAAAGAGAATGGTTATCGGATTCCCGGTCAAACGGACAGTGTAGCCGAGAATCTTGTCCAAGAATCCCAACAGGCGCAGCGTAAGGAGAAAGTGAAGAAGTCAGCGACAGGGCCAGGAACTGCAGCGGCTCCAGCGGAGAAAAGTATGCTGATTCCAGAGACCAACTGGACGCAGGAACAGCAACGCGCCCTTGAGGCGGCCATAGTTAAGTACCGTAAGACGGCAGGCGGGGATCGTTGGCAGAAGATTGCCAACAGTGTGCCGGAGAAGACCAAGGAGGAGTGCCTGGTGCGCTACAAATATCTCTGCGAGCTGGTCAAGACGCAGAAGCGGGCCGAAGAGGAGGCTAACGAGCCGGAGGAAGATTCGGCTGCGATTGAAGAGGAGCTTCCAGAGGAGGAGCCAGTTGCGCCGCCAGAACCGGAGGCAGCGCCAGTCGCCAAAAAGCTTAGCAAGCGAGAGCAGCGACGACGCAAACGAGATCTGTCCAGTGGCGAGGACTCAGACGATGCATATCAATACGAAATCAGTTAG
Protein Sequence
MMMKMRLDLNVACVLACLLLGVSGASAWHSEELEIFDLVEEVNRNFYEFMGINQTATGAEVKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDPSRREKYDRVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPLALWNLPRTIKNGFSKANELKELALEKRRQELEAARRQEELEREAEEQARLRKEHKENLRKRKQNSKAPEKTEEELRGYSQIQARELTDEDAVRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQTDSVAENLVQESQQAQRKEKVKKSATGPGTAAAPAEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKRAEEEANEPEEDSAAIEEELPEEEPVAPPEPEAAPVAKKLSKREQRRRKRDLSSGEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00507545;
80% Identity
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