Deug012048.1
Basic Information
- Insect
- Drosophila eugracilis
- Gene Symbol
- -
- Assembly
- GCA_018153835.1
- Location
- NW:3246409-3248779[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-16 3.4e-13 48.7 0.0 2 45 350 393 349 393 0.95 2 3 0.03 61 3.1 0.0 28 37 423 432 418 437 0.89 3 3 3.2e-20 6.5e-17 60.6 0.0 2 42 459 499 458 501 0.95
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGACACTCGTCCACGATAATGGATATACAGCGCTCGCTACGCAACGACGACGAGAACTGCGAGGTGGTTCTAGCCTCCAGGGATGGCGTCCGGGTGCGCGCCCATCTCTTTGTGCTAAGCACATGCAGCGAATTGATGCGAAACATCTTAGTTGACGTTCCTCGCGGTCAAGAGGCCACCATCGTGCTGCCCGACATCCGAGGTGATTTGCTGGAGAGCATGCTCTCTTTTATCTATATGGGTGAAACGAGCCTGCCCTCCGCTTCTCTATCCGAGTTTCTGGAGGCCATCAACCTATTGGGCATCAAGTCGGCCATCAGCTTTGAATGTAATCCCTCGGCTAGTCCGCCAAGTGTTAATGTGGAGAACGGTACATTAGCAGTAGAATCGGCAAAATCGATTACTGGCTTGCAAATTGCTGAAGCGGAGCTACTGGATGAAGAGGAGGAAGGCAATACCACTGAAACTGTACCAGCCACTGTCTTGGGAGAGCCCCAGAATCAGGCCAACCACTCCAGTCGTTCGTTGGAGTATCTAGATGTATACGAGCCGCCAAAGATTACCTACTCCATTGAGCATATGGACGGCAATTCGAGCGGCAATCAGTTTATTCTTACCGAGAACACAGGTACCTTCACCATCACTCAGTCTGGTTCCAATTTGTCCAAGATGGAAGTCGATGAGACGGTTACCAGTGGCGCCGAAGTGGAGCTGGTAGATGATGATGTTGAGGCGGATATCACAGAGGATTCTGAAGAACACGATGGACAAATGATTGAGGAGGAGTTTGGTCAAACCGATCCACTAATCGAGTTGAGTGGGGCCACTGAACTagacgacgacgaggacgtTCCCGGCGATCTGGTGGACGAAGATTTAGAAGAGACGGAAGAGAAGCCCCGTAAACTAGGAGGAAAGTCGCGTACCCGCCGATCCCTTAATTCCAAGTCCGCGAAGCGTTTGTCTAGTAAGCCGACCCGACTCCAGCAGTATGTGGCGCTCAAACGGGAAGTAAAAGATGATATAAACGATGCTTTGGATTTGGCGGCGGACGCTGTAATTCTCGAGGGCTTGAGCTTGCAAAAAGCCGCCGATCGGTTCGACATCTCTAAAACGGTTCTGTGGAGACGAGTGCGGACAAATCCGGCATACATGCGAAACAACCGGGAACGACCTTCGTTGGCTGAGGCTTATGAGCGACTAAAGAACGGAGATTCGCTAAAGAGTATCAGCACAGAATTGCAAATTCCCATGTCGACATTGCACCGGCATAAGGTTCGTTTGTCAGCACAGGGAAGCCTTCCAGACTTTGTGTCCTGCCGCCGGCGGGACAGTACGCCCAAGGACGAATTGCGTGACAAGTTGGCAAAAGCAGTACATGCCTGCCTTAATGAAGGAATGTCTCAGAACCACGCTGCCAACCTCTTCGAGATCCCCAAGAGCACTCTCTGGCGTCACCTGCAACGACGCATGTCTAATCAAGACCGGAAGGTCAAGAAGGAGCTTGATTATGAGGATGATTTGCTTAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDDENCEVVLASRDGVRVRAHLFVLSTCSELMRNILVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPPSVNVENGTLAVESAKSITGLQIAEAELLDEEEEGNTTETVPATVLGEPQNQANHSSRSLEYLDVYEPPKITYSIEHMDGNSSGNQFILTENTGTFTITQSGSNLSKMEVDETVTSGAEVELVDDDVEADITEDSEEHDGQMIEEEFGQTDPLIELSGATELDDDEDVPGDLVDEDLEETEEKPRKLGGKSRTRRSLNSKSAKRLSSKPTRLQQYVALKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLAEAYERLKNGDSLKSISTELQIPMSTLHRHKVRLSAQGSLPDFVSCRRRDSTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRMSNQDRKVKKELDYEDDLLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00505507;
- 80% Identity
- iTF_00505507;