Basic Information

Gene Symbol
UBP1
Assembly
GCA_018153835.1
Location
NW:6312166-6322240[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.4e+04 -6.6 4.0 140 140 65 65 24 116 0.55
2 3 5.7e-53 4e-49 166.5 0.1 24 187 382 542 367 549 0.92
3 3 1.2e-13 8.7e-10 37.9 1.2 185 222 587 624 581 625 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCCCAAAACTCCGGTCTCTTGGATTTACAAAGCATCTTTGATCCACAATATTCTcatcatcaacaacaacaacaacttttgAGCCAACACCCACAACAAAataatcaacaacaacagcaacaatcgGAACAAATTCAACAACAACATCGCATCTTTTCATCAAAGTTCGATTTGAACCTTTTCAACGAACTCGACCAAATGGAATTCAACAACACTTTAAATCGCAGCCAATAccagaataataataataataataatagtaataataacaatatcaacaacagcagcaacaatcaGAGCAACAACACTAATAACAGTGTAAGTGAAAACCTAAATCAGatCCAAAACCGCCACTTCATCAGCGGCTATCATCACCAGCATATTGGTTCGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGAGAGCAGCTCGCTAATCGAACACATTACCATTGTCGTAGACGCCCAGTCGAAGGACTCGCCGGGACCGCAGATTATCGACGTGCAAACCATTTACCTGAACGGCGGCTCACGCAAAAGACGAATGGATTGGGACTCTTTGGATATTGTCCAAAGTGAGAATTCACCAACAGGATCCCAGAGCAGTGAGCTGCCCACCAAAGTGGCCCATCAAGAGAAGGACAAGCATAAGCGCGAGAAGCCCTCGGGTCGCAGCAGCTGGAGCGATGATATTGGCTTCGATCTGAATGCCGAATTCAACAGCAACTCCTACTTGAACAATGAGAACTTTCTGTCGTTCTCGCCCACTTTGTCCACCCTAAAGCAGGAACCGCAGACGGAGCAGATCAAGCCCGGTCAAAAGATTTCCCTGGACAATGCCGCTGGCTCACCATCCGTGGCAATTGCCAAGTTGGATGACGTTCAGAACTCCCCGGCACAGGCAACTGCTGGCCAGGATTCGGGTTCAGCTAGCAAGCATGATGTTAACTCCGGACTCATCTGCGGATGTGGTTCACCACAGGGTTCACCATTGGCCAACACAGAGTATGAGCTAAACGAGAAGGGCAAACCACAGCAGCAACTTAGCGTTTTGGATCCAACTAAGATCGAGATTGTTTCGCCCAATGGAGCTGCCCATGGCGAGGATCATAAATTTCAGTACATTTTGGCTGCCGCCACTTCTATTGCCACCAAGAACAACGAGGAGACCTTGACGTACCTCAACCAGGGTCAGAGCTATGAAATCAAGCTAAAGAAGATCGGCGACCTGTCCCTCTACAGGGATAAGATACTGAAGAGCGTGATCAAGATCTGTTTCCATGAGCGCCGTCTGCAGTTCATGGAGCGTGAGCAGATGCAGCAATGGCAGCAATCTCGCCCTGGCGAACGCATCATTGAGGTGGACGTACCGCTTTCGTATGGCCTCTGCCACGTGTCACAGCCACTAAGCTCCGGCTCACTGAACACCGTCGAGATCTTTTGGGACCCGCTTAAGGAGGTCGGCGTCTACATCAAAGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAACACGGCGGCGAGAAGGGTGTACCCTTCCGACTGCAGATTGAAACCTATATAGAAAACACAAACAGTACCAATACCAGCGGCTCGAGcggtagcaacaacaacaacagtggtggtggtggagccAGTGGTAATAGCAACGGCAGTTCAAACAGTGTCTCAACTGCTCCAGCATCTCCAGAACGCAACACAAATGGTGGCAACAGTGGCAAACAGGCGGTGCATGCAGCTGCCTGCCAGATCAAGGTCTTCAAGCTAAAGGGCGCTGACCGGAAACATAAGCAAGATCGTGAGAAGATTCAAAAGCGTCCACAATCGGAGCAGGATAAGTTCCAGCCCAGCTACGAGTGCACCATCATGAATGATATATCCCTAGATCTGGTGATGCCTGCCACCACTACAGGCTGCTACAGTCCAGAATGGGGGGCTATGGGAAATTCGAATTGCGAATTCTACGATGGAGTTCAGGGCATTCGTGAACATGCGCTTGCATCTGAAGGATCGTCGCTCCTGCCAACATCAGAAACAGAACGTGATTTATTGGATTTTATGAAACTCTGGCCAAATTCGCCTGTCCACATACCCAAGTACGATGGAATGCTTCCGTTTGCCCCAAGTGCAACATCGCCGGCTACCAGCAGCAGTCCCATAGCCATCAACTCGGTGACTTCTACCAACTCGCCCACCCTCAAGCTGATGGATGCCACCAATATGGTCTCCCCACAGCATGTGCCCGCTGAAATGGATGATTATAACCAAAACATAATGCCGGAATCGACGCCCTCGCAAGTGACGCAGTGGCTGACCAATAATCGCCTCACGACCTATCTATCAACATTTGCGCACTTCTCGGGAGCGGATATTATGCGcatGTCCAAGGAGGATTTGATTCAGATCTGCGGCCTGGCCGATGGCATTCGCATGTTCAACATTTTGCGCGCCAAAACCATTGCACCCAGACTCACCTTGTATGCCAGCTTGGATGGCTGCAGCTACAATGCCATCTACTTGCTGTCGAACACGGCCAAGGAGCTGCAACAGAAGCTGTTCAAGATGCCGGGCTTCTATGAGTTCATGGCCAAGGCCAGTGCCCAGGAGAATGGAGCCGGAGgagtggctgctgctgctgccctgTTTAACAATTGGGGCATGCACTCTAAGTACTCAGGCAGTGGCTCTAATATTTTCAATGATGCCAACAAGAGCTGCGTTTACATCTCGGGACCGTCGGGTATTCTTGTGACCGTCACCGACGAAGTGCTTAACAATGAGATCAAGGACGGCAGTCTCTATGCCCTGGAAGTGCAGGCCGGCAAGGTTATCCTTAAGCTGATCAACAAGCAGGACAACAACTAA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSHHQQQQQLLSQHPQQNNQQQQQQSEQIQQQHRIFSSKFDLNLFNELDQMEFNNTLNRSQYQNNNNNNNSNNNNINNSSNNQSNNTNNSVSENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTESSSLIEHITIVVDAQSKDSPGPQIIDVQTIYLNGGSRKRRMDWDSLDIVQSENSPTGSQSSELPTKVAHQEKDKHKREKPSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLSTLKQEPQTEQIKPGQKISLDNAAGSPSVAIAKLDDVQNSPAQATAGQDSGSASKHDVNSGLICGCGSPQGSPLANTEYELNEKGKPQQQLSVLDPTKIEIVSPNGAAHGEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSGSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSTNTSGSSGSNNNNSGGGGASGNSNGSSNSVSTAPASPERNTNGGNSGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVMPATTTGCYSPEWGAMGNSNCEFYDGVQGIREHALASEGSSLLPTSETERDLLDFMKLWPNSPVHIPKYDGMLPFAPSATSPATSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPAEMDDYNQNIMPESTPSQVTQWLTNNRLTTYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGAGGVAAAAALFNNWGMHSKYSGSGSNIFNDANKSCVYISGPSGILVTVTDEVLNNEIKDGSLYALEVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00602348;
80% Identity
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