Basic Information

Gene Symbol
gt
Assembly
GCA_018153835.1
Location
NW:2595897-2597685[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8 2.2e+03 -1.6 2.2 22 34 80 92 73 107 0.58
2 2 2.8e-12 2.2e-09 36.8 5.2 5 58 388 441 384 446 0.93

Sequence Information

Coding Sequence
ATGCTAATGCACGAGAAACTCATCGCCGGGCAGTTCTTCGATCTCAAGAATGATCGCAAGCCGTTGATGCACCACCATCAGTATCAGCACCACCAGACGCATCACCAGCAGCAATCACTGCACCACTTGCCGCACAGCCAATTGCCGGTTCAGGGATCCTTGGGCTTGCCTAAAATGGATCTCTATGCGGCATATGCCTACCAGCAGCAGTTGCTAGGAGCTGCACtcagccagcagcaacagcaacagcaacatcagcaactgcaacagcagcagcatcagcaacaggcATCCTCTGCTGAGGTTTTAGATCTTTCACGGCGATGCGACAGCGTTGAAACGCCCAGGAAGACTCCATCACCCTATCAGACCAGCTACAGCTATGGCAGTGGTTCGCCCTCTGCCTCGCCCACCAGCAATCTTCTGTATGCCGCCCagatgcaacagcaacagcaacagcagcaacatcagcagcagcaacaattggCCTCCCTGTATCCCGCTTTTTACTACAACAACATTAAGCAGGAGCAAGCCACTCCGACTGCTGCCCCACCAAAGGTCACACCCACCGCTAGCCTCCTACAGACCTTTGCTGCCGCTTCTGCTGCAGCTgccgcagctgctgctgcttcatCGACCAACTCACCGAGACCCGCAAGCAATGCCAGCACTATGCAAATAGATGTCATGGAGAATCCCCAATCTCCGGCTGTTGAGGCCACCACACCAACCACATCCAGCAGTGGGGATGCAAGCAAGAATACTCGTCCCTTTAAGGCCTTTCCCCGGGATCCTTTGGTCATAGCTGCCAATTTCGCAGCCACCGATGTCCTTCTGGATAATCCGCGAGTGGAGCGCTACACAGAATACCGAAAGAGGGTTCTCGAGCAAATCAGGAGCTCCAACGGAGGATCACGCACCGTGACCAATCCCAAAATGCGAAGGACAAACTCAAGGAGCGGCTCCGTCAACGAAGGCAGCTCCTCGAACAACAATAGCGAAAGCGAGGATCGTGCTGCGGCGGAGGAGTCCAGCGACTGCGATTCCCAGGCGGGCAACTTCGAGGGAAAATCCTCCACCAGCAACTCCACCAATTTGGCCAACACCACTGGTGTCAACTCTGGGGTCAATTCGGGCAGCCAGGTGAAGGATGCCGCTTACTACGAGAGACGCCGTAAGAACAACGCCGCAGCCAAGAAGTCCCGCGATCGTCGCCGCATCAAGGAGGATGAGATCGCCATTAGGGCCGCCTATCTGGAGCGCCAGAACATTGAACTGCTGTGCCAAATTGATGCCCTCAAAGCCCAATTGGCCGCCTTCACCTCTGCCAAAGTAACCACCGCCTAA
Protein Sequence
MLMHEKLIAGQFFDLKNDRKPLMHHHQYQHHQTHHQQQSLHHLPHSQLPVQGSLGLPKMDLYAAYAYQQQLLGAALSQQQQQQQHQQLQQQQHQQQASSAEVLDLSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQQQQQHQQQQQLASLYPAFYYNNIKQEQATPTAAPPKVTPTASLLQTFAAASAAAAAAAAASSTNSPRPASNASTMQIDVMENPQSPAVEATTPTTSSSGDASKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSQAGNFEGKSSTSNSTNLANTTGVNSGVNSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAAFTSAKVTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00539416;
90% Identity
iTF_00591462;
80% Identity
-