Basic Information

Insect: Drosophila erecta
Gene Symbol: fru
Assembly: GCA_000005135.1
Location: CH954179.1:9369383-9371374[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 7e-12 9.8e-09 34.8 0.1 1 44 373 416 373 417 0.91

2 2 9.4 1.3e+04 -4.0 0.6 4 19 514 528 514 529 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	7e-12	9.8e-09	34.8	0.1	1	44	373	416	373	417	0.91
2	2	9.4	1.3e+04	-4.0	0.6	4	19	514	528	514	529	0.73

Sequence Information

Coding Sequence: ATGGGCGGCCCAACGGCGCCGGTGGCCAGCAGCGGCGAGGTGGGCCAGACGTACTGCCTCCGCTGGAACAACCACCAGACCAATCTGGTACAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCAGCCTGGTGGTGGACGATGAGCAGTTCCAGGCCCATCGCGTGGTTCTGGCGGCCAATTCACCGTATTTCCAGCACATCCTGAAGGATGTGCCGCAGGACCACTGCAGCATTATACTGCCGGGAGTGAAGGGCTTCGAGATTGCCGCCTTGCTGCAGTACATGTACACAGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATTCTGCGTACGGCCAAGGAGCTGCAGGTTAAGGGTCTGTACGACAACTTGATGAAGTTCAATCATGCCAGCGTCACGCCCACCTCCAGCTCGGGAGCTGGCGGAGCCAAGCCCCAGAACGGATCCGCATCCAACCACTCCTCATCCGTGATctccacatccacacacaTCTCGCCCAGCGCCGCCATCTCGAGCAGCTGctcaccaccaccgccgccgcagTTTGGCTATCAGCCGGGCTACAGCCACTAtcctcagcagcagcaaatgccgGCCAGTCAAATTCCGGCCGGTGAGGCTCCACTGACCCCCACCCAGGCCACGCCCCACTCGGCAGCCTCGGGAGCGGGCGAAGCCGGCGGCCAGTGGCCACTGACgccctccgccgccgccgccatgTTGAACTCTGTCTACGAATCAGCCGCCGATATGAATCCTCTCAAGCGCAAGAAGCTGTCGGCCATTTCAAGCATGCTCCTGAGTGGAAATCGCGACACACCCATCCTGAGAAACGTTCTGGCCCAAGCTAATCCCGCTGACTCCTCGCAACCCGGACCAATGAATGCCAATGGAGAGAAGACGCCCACTCATCCACACCAGAATACCCAGCTTCCGGCCGGATTGGGAGTAAGTGGAGGCGAGCGCAATCACAGCTTCAATGGGTCAGACTACGGCGGCGACAAGGAACCACTTTCGCCCTACACAGATCGTTCCTTTGAAGAGGAGACCGGTCAGTCCGGGGGCAAGAAGCCGGAATGGAAGCGGTACAAGCAGTATACCAGAGCGGACATGATGTGCGCCATCCAAGCGGTGAGGGAGGGAATGAGTGCCCTGCAGGCGAGCAGGAAGTATGGTCTGCCCAGTCGCACCCTCTACGACAAGGTCCGTAAGCTGAACATCACGACTGGACGTGGCACCCACCGCACACCGAAACGCAGCCCTCCGGGAGCAGAGTCCTCGCAGGGTTTTTCATATTCCGCCGCGGCAGCCGCTGCTGCCCACAACTACGGACATGGCCATGGACATGGCCATCACTCGGAGGTGAAGCGTGATCAGAAGGTGGACCATGTGCCCGCCCATCACGGCATGCCGCCCACCATTCCACCCTCAGCTGCGGCTCTCCTGGATCACGCTTTCCTTCAGCAGGCTCTGGAGAACCGTGGTGGTGACATGGCCGGCCGAGAGGCTCTCCATGCCATGGCACTGGCCGCAGCTGCCCATGCCGCTGCCAATCGCCTGTCCACCAGTCCGGCGGAGATGGACCAGCGCTCCAATGGCCATGGCATGCGGTCGCCAAGTCCGCAAGGTCGTCACTATCCGCACGAGCAGGAGGCCATGGACTTGGAGATGGAGAAGCACGAGCAGAATATAATCAAGCGGGAACGCGACCAGGACGAGCGTGAGGATGCGGACGATGAGGAGGATCATGAGCAAGAGCACGTGGAGGATCTCTCGCTGGCCAGAAAGGAGCGGCCACCATCGCCCTACTCGCCGCAGCCAACCGAGGGTGGTGCCGGCGTGATCATGCACGCCAGCAGTGCGTCCGCCAATGGCAAGGATCACGAGGACTACCCATCCTCGCCGCAGTTCGTTCCCATTGGGCTGAAGAGGGAGCTGGTGGAAGCCGAGGACGCTCAGGCCCGGGCCGACTGA
Protein Sequence: MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAGGAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQQMPASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSTSPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEGGAGVIMHASSASANGKDHEDYPSSPQFVPIGLKRELVEAEDAQARAD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00515674;
90% Identity: iTF_00539586;
80% Identity: iTF_00504770;