Basic Information

Gene Symbol
grh
Assembly
GCA_000005135.1
Location
CH954179.1:7929867-7955631[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.086 3.9e+02 0.2 0.3 74 118 185 229 153 250 0.68
2 3 0.39 1.8e+03 -2.0 1.4 91 109 483 501 467 519 0.49
3 3 5.8e-63 2.7e-59 200.2 0.5 24 221 631 823 617 825 0.93

Sequence Information

Coding Sequence
ATGCAGGAAGCCACGAGCACTACGAGCTATGCCTTATCATATACGGACTGGATGTCCGAGCCACGGCGAGGCTTCAGCTTGGACTCACTGCACCCGGCGCACGTGGAAGGCGataaccagcagcagcaccagccgcagcatcagcaccagcagctACTCCACCACTACTACAGCCCAGTTGACCAGGTCAAGGATCAGGCATTGGGCTTGCCCTTGAGCCACCATCAGGATCACCATGATAGCCATGGTAACCATGGTCACCACCTCACGGCTGCGGGCTTGATGCAGGCCGTTGCCGCGGAGATCCAACTGAACGAGGATCCGGATCAACTGCATCAGGATCCCAACGCCTCCCAAAATAGTCCTTATCCCATATACAGCTACTATCGCAGCGACGGAGAGAAGGCGAACGATGGTTCTCCTGGTGCCGATCTGCCCTGGAGCAGTGGAAAGCTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAGATTCAAGGCTTTCTGCTCGGCTCACACCCCTCGTCATCAGCGACGGTCAGCACAACCGGCGTTGTCTCCACGACAACGATCTcgcatcaccagcagcagcagcagcaacagcagcaacagcagcagcagcaacaccagcagcaacatcccgGCGACATTGTTAGTGCCGCTGGCGTGGGGAGCACGGGCTCCATTGTCTCCTCtgcggcgcagcagcagcagcaactaatTAGCATCAAACGAGAGCCCGAAGACTTGCGCAAGGATCCCAAGAACGGCAACATTGCCGGTGCTGCAACCGCAAATGGACCGGGTTCGGTCATAACGCAGAAGATCTTGCACGTGGATGCACCAACGGCAAGTGAAGCTGATAGGCCCAGCACacccagcagcaccaccagcatcaGCACTACTAGCACTGAAAACACTGAATCGGAGCCACAttcaggatcaggatcaggatcagaATCAGGATCGCCGGGAGCCAGGACCACAGCCACACTAGAGATGTATGCAACCACGGGCGGCACACAGATCTACCTACAGACCTCACATCCCAGCACGGCGAGCGGAGCGGGCGGCGGCGCCGGACCGGCTGGAGCCGCCGGTGGCGGCGGGGTGTCCATGCAGGCGCAGAGTCCCAGTCCGGGTCCCTATATCACGGCCAATGACTATGGCATGTACACGGCCAGTCGCCTGCCACCCGGTCCCCCgcccaccagcaccaccacgtTCATAGCGGAGCCCTCCTACTACCGGGAATACTTTGCGCCGGACGGCCAGGGTGGCTATGTACCGGCCAGCACGAGGTCCTTGTACGGCGACGTGGATGTATCCGTATCTCAGCCCGGCGGCGTGGTCACCTACGAGGGCCGCTTCGCCGGCAGCGTTCCCCCGCCCGCCACAACCACCGTGCTCACCAGcgtgcaccaccaccagcagcagcagcatcagcagcaacagcagcagcagcaacagcagcagcagcagcaacaccaccagcagcaacagcaccatTCGCAGGATGGCAAGAGCAACGGCGGAGCAACGCCCCTCTACGCTAAAGCCATCACGGCGGCGGGTCTAACGGTGGATCTGCCAAGTCCGGACTCGGGCATTGGTACGGATGCCATCACACCGCGGGATCAGACCAATATCCAACAGTCCTTCGATTACACGGAATTGTGCCAGCCCGGCACGCTGATCGATGCCAATGGCAGCATACCCGTCAGCGTGAACAGCATCCAGCAGAGGACGGTGGTCCATGGCAGCCAGAACAGCCCCACCACATCGCTGGTGGACACCAGCACCAATGGATCCACGCGATCGCGGCCCTGGCACGACTTTGGACGTCAGAATGATGCcgacaaaatacaaataccaaAAATCTTCACAAACGTGGGCTTCCGATACCACCTGGAGAGCCCCATCAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTACGGAATAACGCTGGAGTATGTGCACGATGCGGAAAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATTATGCTAATGTTCCGCGAGGAGAAGAGTCCCGAGGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTCGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTTCAGTGCTTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATACGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAACGAAAGACGCGCGATGAGGAGCGGCGGGCCGCCAAGCGAAAGATGACAGCCACGGGCAGAAAGAAGCTGGACGAGCTTTACCATCCGGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTCGCCAAGCCGCCGGTGCTGTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCACCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAACCACTTTCCGCCCGACATGCAGACCGATAAGAAGGACCACATACTGGACCAGAACATGCTGACCAGCACACCACTGACCGACTTTGGTCCGCCGATGAAGCGCGGCAGGATGACGCCGCCGACCTCGGAGCGCGTGATGTTGTACGTGCGGCAGGAGAACGAGGAGGTGTACACGCCGCTGCACGTGGTGCCGCCAACCACGATCGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MQEATSTTSYALSYTDWMSEPRRGFSLDSLHPAHVEGDNQQQHQPQHQHQQLLHHYYSPVDQVKDQALGLPLSHHQDHHDSHGNHGHHLTAAGLMQAVAAEIQLNEDPDQLHQDPNASQNSPYPIYSYYRSDGEKANDGSPGADLPWSSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATVSTTGVVSTTTISHHQQQQQQQQQQQQQQHQQQHPGDIVSAAGVGSTGSIVSSAAQQQQQLISIKREPEDLRKDPKNGNIAGAATANGPGSVITQKILHVDAPTASEADRPSTPSSTTSISTTSTENTESEPHSGSGSGSESGSPGARTTATLEMYATTGGTQIYLQTSHPSTASGAGGGAGPAGAAGGGGVSMQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTTTFIAEPSYYREYFAPDGQGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTSVHHHQQQQHQQQQQQQQQQQQQQHHQQQQHHSQDGKSNGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00536531;
80% Identity
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