Basic Information

Insect: Drosophila ercepeae
Gene Symbol: -
Assembly: GCA_018150545.1
Location: JAECWL010000192.1:10983004-10985114[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.6 1.1e+02 3.4 0.3 2 15 166 179 165 181 0.90

2 8 3.3e-06 0.00023 21.2 1.5 1 23 393 415 393 415 0.98

3 8 0.00024 0.017 15.4 0.3 1 23 421 444 421 444 0.98

4 8 0.44 31 5.1 0.5 3 23 452 473 450 473 0.89

5 8 1.6e-05 0.0011 19.1 5.3 1 23 496 518 496 518 0.98

6 8 1.9e-06 0.00013 22.0 0.3 1 23 524 546 524 546 0.95

7 8 0.0063 0.44 10.9 0.4 2 23 552 573 551 573 0.96

8 8 0.0015 0.11 12.9 0.8 3 23 581 603 579 603 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.6	1.1e+02	3.4	0.3	2	15	166	179	165	181	0.90
2	8	3.3e-06	0.00023	21.2	1.5	1	23	393	415	393	415	0.98
3	8	0.00024	0.017	15.4	0.3	1	23	421	444	421	444	0.98
4	8	0.44	31	5.1	0.5	3	23	452	473	450	473	0.89
5	8	1.6e-05	0.0011	19.1	5.3	1	23	496	518	496	518	0.98
6	8	1.9e-06	0.00013	22.0	0.3	1	23	524	546	524	546	0.95
7	8	0.0063	0.44	10.9	0.4	2	23	552	573	551	573	0.96
8	8	0.0015	0.11	12.9	0.8	3	23	581	603	579	603	0.92

Sequence Information

Coding Sequence: ATGAGATGTGTCGTGCCCAATTGCAGAAATGCTTTTGTAGGTAGGGCCAAGAGGGACCCGAATCAGCAGCATCCCATTGGATTCTTTAGTTTCCCAAAGTGCCCGGAAACATTCAAACTTTGGCTCGATTTTTGCGGTTACGAAAATGCTCCAAAAATTAAGAATCCATATATTTGCATCGAGCACTTCAAAGTGGAGGACATTGAGGGATCCCTCAAATTCGAAATGGGATTGGCCAAAAAACGAACTTTGCGTCCTGGTGCTGTTCCTTGCATTAAAAATAACGAGAGTCCCTCTGAAAGAGCACGCCAAGAAGGCATCCAGCGGCGCGAGAACCAACGACTGGTAAACGAACTCTTGGCGGAGGACGAGACCAAGAACGATAGACTCAGCACAGGAATAGCTGCTGCTCCGGAGTTTGTTACGCCTCCACAAGATAAAGGTGACCCAAGTGACGATGCTTCTTCGGAATTTAATCCCCAGATCCACCAAAATAAGTGCCGCATCTGCTACGAGGACTTCAGTAACGCATCTTCAGCGAAAGATCTCTTTGATGAGGCCAACAGCATCCTGCTTTTTCACATAGAAGTCATAAGCGGTGTTTGGATCAGCCAACTTAAAGGAGAACCTCATGTTATTTGCCAAGCATGCGAATCGGTACTCCATCAGGCCATCGAATTCCGAGAAATGTGCATAAACACGGAGCTAAAGATCACTCAAGCAATGGCAACCAAGCAATGCAATATCGAAGTTAGGGCAAACGAACCCGACGAAGTGGTTGAAGAAACCCCACCAGAGGTCGAATTTATCCCTGGGTTGGAAGATCTGGAACATGATAAAGAGGAGCCTCTGGAGGACGAACTTATAGTAACCGCTGATAGTCAGCTAAAGGAACAGCTAAAAGAGCCACCTACAAGTATCTCTTCGTCAGATCCGCTTAGCGTAGATGTGGGAGCCATGGTCATGATCAAGGAACTACTTAATCAATATACAGGACAAGAGACAACGAGAAACAGAACAAAAGCTGAAGAGCCATCTAACAAAAGGGAGAAACCCCTAGCCAAACCGCGAAAAAATGCAGTCCGCCAACAAATGCCAAAGAAAAGGGGTAATCCGAAGACCAAGGAGGAGAGAAATCTCATCCGCCGTGCACAACTTCGTGCGAAGCCGCCAAATTTCGTGTGTGATCAATGCGGCCAGGCCTTCCGCATGTCACACAACCTTCGCATCCACCAATTGCGCCACACCCGCACTAAGAACTACCAGTGTAGTGAATGTCCGATGACATTCTACGATGCCTATATGCGCAATATCCACGTCCGAGTCCGTCATAGGGGGGAAACTCCTTATGGGTGCCGTCACTGCACTGAAACCTTTGGTTATGCGGGAGCACGTCAGAAACACGAAAGCGAAGTTCACGGAGCCCCACCCCGCCTGATTGTACACCGCATTAATCCAAAGCCTATGCAACGCACCGATGTGCGGCACTACTGTAATCAGTGCCATAAAAGTTACGCCTCAAAATATGCCCTCCGCTGGCACTTGAAAACGCACACGGACCCACCGAGTTACAAATGCGAACAGTGCGGCAAGAGTTACAACGACCCAGCTAAGCTCAAACGCCATGAGGTTATCCACGACAAGAGACCTCTGCAGTGCGATGTCTGCCTCAAGGGATTCTACCAGCGTACGCGGCTAAAGGAACACGAACTGATTCACACTGGAGAGCGGCCCTACTGGTGTGAAATCTGCAATGTTAACTTTCGGTACAAATACAACATGAAAACACACGCAAATACCAAAATGCACAAAGACAATCTGGAAAAAAAGGAATCCATTCATGAGTTTGTAACTGAATAA
Protein Sequence: MRCVVPNCRNAFVGRAKRDPNQQHPIGFFSFPKCPETFKLWLDFCGYENAPKIKNPYICIEHFKVEDIEGSLKFEMGLAKKRTLRPGAVPCIKNNESPSERARQEGIQRRENQRLVNELLAEDETKNDRLSTGIAAAPEFVTPPQDKGDPSDDASSEFNPQIHQNKCRICYEDFSNASSAKDLFDEANSILLFHIEVISGVWISQLKGEPHVICQACESVLHQAIEFREMCINTELKITQAMATKQCNIEVRANEPDEVVEETPPEVEFIPGLEDLEHDKEEPLEDELIVTADSQLKEQLKEPPTSISSSDPLSVDVGAMVMIKELLNQYTGQETTRNRTKAEEPSNKREKPLAKPRKNAVRQQMPKKRGNPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHQLRHTRTKNYQCSECPMTFYDAYMRNIHVRVRHRGETPYGCRHCTETFGYAGARQKHESEVHGAPPRLIVHRINPKPMQRTDVRHYCNQCHKSYASKYALRWHLKTHTDPPSYKCEQCGKSYNDPAKLKRHEVIHDKRPLQCDVCLKGFYQRTRLKEHELIHTGERPYWCEICNVNFRYKYNMKTHANTKMHKDNLEKKESIHEFVTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00545998;
90% Identity: iTF_00545998;
80% Identity: iTF_00504023;