Basic Information

Gene Symbol
-
Assembly
GCA_018150545.1
Location
JAECWL010000161.1:13872754-13874508[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.9e-06 0.0051 16.7 0.2 1 45 47 106 47 107 0.88
2 4 0.09 77 3.3 0.0 1 34 179 223 179 226 0.85
3 4 1.7 1.4e+03 -0.7 0.0 4 16 305 317 305 321 0.81
4 4 0.4 3.4e+02 1.2 0.1 31 45 349 363 339 364 0.74

Sequence Information

Coding Sequence
ATGAGTAAATTGTGCGCCTTTAGTGAGAACCAGGAAGATGAAAACGAGACTGAGCAAAAATACGCCCACCTGCTGAATTCCGATTATTTTGGCGGTGCAACCCAATCCGGTTTGGAAAACAGCACTGATATACGCACTCGCAGGAATTGGACAAAGGACGAGGTGGAACTCTTCCTGGGACTCATTTGCCAACTCAAGTTGCAAACGCAGGTGCATGGAAAACGCAATGCGAAGGTTTTCAAGGTTATTGCCAAAGAAATGGGTAGAAAAGGCTGCTCCAAGACAGCACAGCAGCTGCAAACCAAGTACCATCAGTTGCGAAAACAATACCTGAAGGCCAGAAATTGTGGAGAGTCATTCGAGCACTTCGAGGCACTTCACGAATTATTTCAGGCCAGTGGAGCCTTAGACCTTGAGCTGGAGCCCGACAGTGACAGCGAGGCGGGGATGGACGAGGACATGGCCGACATGGGCTCTGAAAGCGAAGGAGATGACACCTTGGATGCCTCTTCCTCTACTATGCCCACCAATTCCCGCTGTAAATGGACCGACGGTGAGGTGGAGATGATGTTTGACCTGATTAACACAATGGGCGTGCGAAGAGCTCTATTGAGCAAGCGAAATGCCAAAGTGTTTAGAGCTTTAGCCAAAGAAATGGCCAAGCGAAACAGCAACAAGGGCCCAGACAAGTTGCGCATCAAGTTCCAGGTGCTGCGTCGAATGTACAACAAAGTAAAGAATGGAACTGGAGAGACCTTTGAGCACTTCGAAGCCATGCGCCAAGTGCTGGACCCCACGCCCGAAGAAGCGGCAGTTGTTGAGGCGGATGCCACTTTAAGTACTGCCAGCGAAAGCGAATTTAACGATAGCGATGATGATGATGGAGATGGCTCGCTAAGGGGAGCTCACTTTTGGTCAGATGAGGAGGTGGATGCTTTCCTTTTGATTATCAGGGACAAAGGCTTCTTTCGTGCCTTGGATGGCTCGAGAAAACGCAACTTCCAGACACTGGTGCACATTTCCAACATCCTGGCCAAGCAATCCTATAAACGCACCCCACACCAGCTGCGAAATAAACTGAGACTGCTTCTCAAACGGCATCGCGAAGCCAAGGAGAATGGCTTGGAGAATGTGCGCATCCTGCCCAGACATTTTGAACTGTTCGACGAACTGATGAAGACGCAGCACGAAGGTCGCAAAGGATACATGCAAAGACCCACCCGCCCTGAAAAAACATTCTTGTCAAAGAAACCCAGGACAGACCCACCGCCCGAGACGGAAAGTGATAACTCCAGCTCCACCTGTGATCTTTTAAGAGCTGCCTGCGAAAGCGAGGATTACGAAGCTACATTAAATACAGGCGAAGCAGAGCTGCCCACGCCGATGGAGGCTTTAAACTCCATAATGGAGGGACAGAAACAACTTCTAAGCCTAATCAAGACGACCAACGAAAGTTTCCTGCGGGAAATGCGCGAACAGCAGCAACAATTTCTGGAACAAGTATCCGAGCTGATGCGCCGCAATCGCGAGGAGACTCTTCGCGGGATCAAGGAACTAATGCCACCCAAGTAA
Protein Sequence
MSKLCAFSENQEDENETEQKYAHLLNSDYFGGATQSGLENSTDIRTRRNWTKDEVELFLGLICQLKLQTQVHGKRNAKVFKVIAKEMGRKGCSKTAQQLQTKYHQLRKQYLKARNCGESFEHFEALHELFQASGALDLELEPDSDSEAGMDEDMADMGSESEGDDTLDASSSTMPTNSRCKWTDGEVEMMFDLINTMGVRRALLSKRNAKVFRALAKEMAKRNSNKGPDKLRIKFQVLRRMYNKVKNGTGETFEHFEAMRQVLDPTPEEAAVVEADATLSTASESEFNDSDDDDGDGSLRGAHFWSDEEVDAFLLIIRDKGFFRALDGSRKRNFQTLVHISNILAKQSYKRTPHQLRNKLRLLLKRHREAKENGLENVRILPRHFELFDELMKTQHEGRKGYMQRPTRPEKTFLSKKPRTDPPPETESDNSSSTCDLLRAACESEDYEATLNTGEAELPTPMEALNSIMEGQKQLLSLIKTTNESFLREMREQQQQFLEQVSELMRRNREETLRGIKELMPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00477279;
90% Identity
iTF_00614850;
80% Identity
-