Basic Information

Gene Symbol
-
Assembly
GCA_018150545.1
Location
JAECWL010000192.1:16052175-16054418[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.2 1.9e+03 -1.2 0.0 22 46 194 220 194 220 0.76
2 6 2.7e-07 0.00024 21.0 0.0 1 41 226 267 226 272 0.92
3 6 0.36 3.1e+02 1.4 0.0 12 26 272 287 269 289 0.84
4 6 3.2e-06 0.0027 17.6 0.1 2 45 282 329 281 330 0.90
5 6 9.2e-06 0.0079 16.1 0.0 2 46 337 382 336 382 0.88
6 6 1.8e-08 1.6e-05 24.7 0.0 3 43 390 431 388 434 0.95

Sequence Information

Coding Sequence
ATGGACGGGGTAGAGGAATTGCTGGTAAACCAGCAACACCTGGTGTCGGAAATAAATAGCTTGTTGTGCACCACACAGGCACCGACCGATCCCAATGCGCTGCTGCTGAATCAGGAGATGCAGCGCCGCCTGCACCAGGTGCGGGCCAAGATTTTGTCCCTTCTTCAGCTTGTAAAGGCCCGATACCTTCGAAATCAGGAAATCTTGAAGCGTCGCATGCAGCCGCGTTCCCGATACGGCCTTGAAAACCTTTCCCTAAGCGGTGCCATCCTGCGCAAAGGCACATTTCGTTTCAAGGGAAACCTATACTTTCGGGATATCGATGGACGCAGTTGTCCCAACAACGAGGACTACGAGACACGGTGCCGGACAGAAATGTTTCCCACTGACTTCGACATGCGATCCCGGCATGTGTGGACTTTACTGGACAAAAAGAACGTGATCATGGGCATCAAACAGCAACTGTTGGACCACTGTGCTCAAGACAAAATCTCGATTAAACGTAAACGAAGGCCAATTGAACGACATGTCAGTACGTTGGTAAGCCTTCTGGCTTCTGCGGACAGCAGCTTCAGCATCGATTGGAATCAAATCAGTACCCTCGATCTGGAGTATCGCCACTCGCCCTATAGTTGTGAGGCCATGTGGCAGTTCTACCTGAAGCCAGAACGCAACCGTGGAGAATGGACTCTAGACGAAGATGAAAACCTTATTGCTGTAGCAACGGCCAACAAAATGCAGAATTGGGAAGTGATAGCCTTGTGCACGGACCGGCGATCAGACTACCAGTGTTTCGTTCGCATTAACACAAATCTACGACACGCACTGGACGCTAACGGCGGCAACCGCTGGAACGACATTGAAAACGATCGTCTCCGGATGTTGGTGCACAAGAATTCAATCAATGGCATTACTAATTGGAACAAGGTTGTGGAATACTTTCCCGGCAGGTCCAAGTCAACGATAATCGGTCGTTACATGTATGTTCTTCATCCCAGCATCAGTCATGAACCTTTTACCGCCAAGGAGGATATGATGTTGTTCGCTGCCGTAGAAGAATACAATGGAAAATTTCACTGCTTTCCGCGCACTCTGTTCCCCAATCGATCACTCGCGCAACTACGGACGCGCTATCAAAACACCCTGGCGCAACGGAATAAGACCGATGCATGGTCGGTGCTGGACGACAACCGGTTGATGGAATTCGTCACTGAACACGGCACCTCCCAGTGGCTAGGCTGTGCCAACTTTCTGGGCAATCACACGCGTACTAGTTGCCGTACTCGTTTCCTGGTTATTAAGAAATTTTTGGAACAGAATCCGTCAGCATCGGTGGAGGATTTACCGCGGCGCAGATCGAAGAAAGTTGCCCCAATTACTGCAGAGAATTGGGCGCAGTGTTTGCAGGAATGGCAGGAGGATCCAGATTCAATCACCAAAATGGACAAACGAAACGGTCCTAAAAAACGAGCAAAGAAGCCAAAGATAGATTGTCCTAATAAAATGGGAAAACTTGAAGTGGAGTACCTAGACCATTTTAAGTTTTCTTACAATTTGCAGTTGCTAAGGCCTCTGACTTTTCCGTTTCCCAAAGATAATGGAAATCTAACTTATGCAGCGAAAGCTTTATCCTACGATCCGCCGGCTCGTCTCCAGCCTTTATTAGGTGTTTCCATGCCTAAAGAACTGCTGGACACATACAGTCAAATGATGGGTAAACTTCCGAAAGAAAAAATCAATTTGAAAAGACCGCTCCTGCCGCCAAACTGGTCCACAATGATGGGGTTTCGAGCCCTATGTATTCTCTCCGGAGACTGTCGCAAGGTGGCTCCTTCGGCACAAGTCTTCGCTTACGAGGAATCCGATCCAGCTATTCAACTCTTTAGACGGAGATTGCGTGCACTCTTCTATCGAACGACTCTATTAAGTCGCCTGGAATCTCAAATTTTCACTCAACTGCCCAGCTCTTTGCAGGCTGCACAAAGGCCTTTACCGAAATTTATTCAAATGGGAATAAACCTAAACTCTGCCCAACAGTCACCAAAGGAAGACTTAAAACCGGAACCGCTGAGCGAGGACGAAATTCCAGACACTATGATGCTGGAAACAGCAGTGGAATACATTGTACCCTAG
Protein Sequence
MDGVEELLVNQQHLVSEINSLLCTTQAPTDPNALLLNQEMQRRLHQVRAKILSLLQLVKARYLRNQEILKRRMQPRSRYGLENLSLSGAILRKGTFRFKGNLYFRDIDGRSCPNNEDYETRCRTEMFPTDFDMRSRHVWTLLDKKNVIMGIKQQLLDHCAQDKISIKRKRRPIERHVSTLVSLLASADSSFSIDWNQISTLDLEYRHSPYSCEAMWQFYLKPERNRGEWTLDEDENLIAVATANKMQNWEVIALCTDRRSDYQCFVRINTNLRHALDANGGNRWNDIENDRLRMLVHKNSINGITNWNKVVEYFPGRSKSTIIGRYMYVLHPSISHEPFTAKEDMMLFAAVEEYNGKFHCFPRTLFPNRSLAQLRTRYQNTLAQRNKTDAWSVLDDNRLMEFVTEHGTSQWLGCANFLGNHTRTSCRTRFLVIKKFLEQNPSASVEDLPRRRSKKVAPITAENWAQCLQEWQEDPDSITKMDKRNGPKKRAKKPKIDCPNKMGKLEVEYLDHFKFSYNLQLLRPLTFPFPKDNGNLTYAAKALSYDPPARLQPLLGVSMPKELLDTYSQMMGKLPKEKINLKRPLLPPNWSTMMGFRALCILSGDCRKVAPSAQVFAYEESDPAIQLFRRRLRALFYRTTLLSRLESQIFTQLPSSLQAAQRPLPKFIQMGINLNSAQQSPKEDLKPEPLSEDEIPDTMMLETAVEYIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00614835;
90% Identity
iTF_00614835;
80% Identity
-