Derc015298.1
Basic Information
- Insect
- Drosophila ercepeae
- Gene Symbol
- -
- Assembly
- GCA_018150545.1
- Location
- JAECWL010000161.1:18534861-18547781[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.9e-12 2e-08 33.6 0.0 1 40 866 906 866 909 0.90 2 4 4.9e-14 1.1e-10 40.8 0.1 2 39 921 958 920 961 0.94 3 4 1.2e-17 2.5e-14 52.5 0.0 1 45 975 1020 975 1020 0.98 4 4 1.2e-19 2.6e-16 58.8 0.0 1 43 1027 1070 1027 1071 0.97
Sequence Information
- Coding Sequence
- ATGGCATGTTGTTCAATAACGGACCCCCCTTTTCCGCCGCCCTTCCGCGTCATTCCCTTCCAGAGTTCCGTTGAGCTGACGACGACGTCCCCGACGACGACGACGACGCTGACGACGACTGCCTTCAATCAGCAATGTTGGCGACGACTCCGGGCAGCCCAGCAATTTATCCAGCCATGCATATTAAGCCTCACGATTTGTATTTGTGTTTTGGGTTCAGACCGAGACCCAGAGCCAGAGTCCGGAGGTGGAACCTATCTGCTGCCGAAATCCGAAATACATGCCCGTTCCCTTGTTCCCTTCGAATCGAATCCCAAAACGAATCCCAACCCATCGCCTCCTTTCTGCTCCTTTCTGCTCCTTCCTGGTGCCTCCTTTCTAGTCCTGAACGGTGCCTCCTTTTTAGTCCTCAACGGTGCCTCCTTCTTGCTCCCAGTCGATGCCTTCTTCCTACTACTACCACGTGCCTCATTCCTGCTCCTAAACGGTGCCTCCTTCCTAGTCCTACTCGGAGACCTCGGGCGGAGGGCAGCCAGTGAGCCACTGAGCCACCCAACCACCTTGCCACCCATCTACCCTCCCAACCACCCATCCATCCAAAATAACTGTCCACCACCCAGTTGCCAGTTCCCAGAGCCCAGTTCCCAGACCCAATTCCGACCCAATCCCAGCCAGGCGGGCCTCTTGCGCACCGCCGAGCAACTGAAAATCAAAGGACTCTGCGAGACGGCAGAGAACGCGGATGACCTTAACGACGCGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCTACGTCCGGTTTGCAGCCAACGCTACGCAAGTCGCGGCTAAAGCGTTCCAAGTCACCGGACTTGCCCGGCAGTTCCGGAGCGGGATCAAGCAACTCGTCCCAGCAGCAGCAACCGCAGCCGGCGCACCATCACTCCCAGACTATTCTCATCCAGGGCCAGAATCAGGCCTCCATTGTGAGCCTGCAGCAGACGGCCGACGGCAACTACATACCAGTGTCCGGGAACGGTGACGAGTCGGACACCGAGAACGAGCACGAGCACGGGCACGGCCACGGACACAGTGGACATCCGCACGGACACAGCGGACACAGTGGACATCCGCACGGACACGATCACGACCACAGCCACACCCACAGCCACAGCCACTCGCATTCGCATTCGCATCCGCATTCGCACGACCACGAGCACGACCACGACCCGGAGCACGATCACGACGAGCACGAGAACAAGCCGAACAAGATCTGTAAGACGGAGCAGTCGGTGGCCTCGCCGGCATCCAATTCATCCGGCGCCTCGAACAATGCTGCGGGCGTGAGCGGCGGCGTCACATCCTCCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGTCCATGGGCTTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTCACGGAACACGTCGATCTGTCCTGCAACCCCAGCACGGACACACGCGATCTATCAAACCCCACCGAACCGCTCGATATTGACAATCATCTGGCCCAGCAGATCCACCGGCTCGATCAGTCCCCCATGCACTCCATCTCCCATCACCACACCGGCGACGAGAGCAACTCCAACCTGGTGCACATCAAGAGCGAGGTAATCGAGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCGATATCGGCGGCGCCACCGTCATGGAGATCGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCGGGGCATATGGACATGTACAACTCGGACACGAGCGAGGACTCGATGATGATCGCCAATGGGTCGCCGCACGACCAAAAGGAACCGCACTACACGAACTTGGATCAGCAGCACGGTGGTCTGGGGGGCAGCGTATGCGGGCCGGGGCCCGGTGGTGCTGGTGGCGGTGGGGGCATGGGTGGTGGTGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACATTGTGGCAACGTGCTCATCGCCTCGGCATCGAAACGCCCAAGAAGGAGGGCGGAACGAAGTCCTGGAACGAGGATGCTTTGCAGAATGCTTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCTTTCGGCATACCCTCCTCGACGCTCTACAAGATTGCCCGGCGGGAGGGCATCCGCCTGGCGGCTCCGTTCAATGCCGCCCCAACCACGTGGACGCCGGAGGATCTGGAGCGCGCCTTGGAGGCGATACGGGCGGGCAATACATCGGTCCAGAAAGCCAGTGCCGAGTTTGGGATACCCACAGGAACACTTTACGGACGCTGCAAGAGGGAGGGCATTGAGCTGAGCCGCTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTACGGACGCTTCAAGCGCGGCAAATACGATGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGCCAGGAGAACTCGGTACGTCAAATCCAAAGGAGCTAA
- Protein Sequence
- MACCSITDPPFPPPFRVIPFQSSVELTTTSPTTTTTLTTTAFNQQCWRRLRAAQQFIQPCILSLTICICVLGSDRDPEPESGGGTYLLPKSEIHARSLVPFESNPKTNPNPSPPFCSFLLLPGASFLVLNGASFLVLNGASFLLPVDAFFLLLPRASFLLLNGASFLVLLGDLGRRAASEPLSHPTTLPPIYPPNHPSIQNNCPPPSCQFPEPSSQTQFRPNPSQAGLLRTAEQLKIKGLCETAENADDLNDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATSGLQPTLRKSRLKRSKSPDLPGSSGAGSSNSSQQQQPQPAHHHSQTILIQGQNQASIVSLQQTADGNYIPVSGNGDESDTENEHEHGHGHGHSGHPHGHSGHSGHPHGHDHDHSHTHSHSHSHSHSHPHSHDHEHDHDPEHDHDEHENKPNKICKTEQSVASPASNSSGASNNAAGVSGGVTSSGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVSMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVHIKSEVIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGLGGSVCGPGPGGAGGGGGMGGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSVRQIQRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -