Basic Information

Gene Symbol
grh
Assembly
GCA_018150545.1
Location
JAECWL010000161.1:16357673-16381835[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-30 1.2e-26 93.2 0.1 24 148 699 818 685 821 0.92
2 2 2e-17 1.6e-13 50.3 0.2 169 221 821 872 818 874 0.91

Sequence Information

Coding Sequence
ATGCAGGAGGCCACGAGCACTACCAACTATGCTCTGTCGTACACCGATTGGATGGCCGAGCCACGGTACAAAAAGGATCAGAAGGAGGATAAGATACAGATAAAGGACAACACTCCTGGCGCTGTCATAAATGCCAAAGGATTCGATCACGTCGAAGGATGTCGATGTTGTGTGTGCTTCTCCCAGGGATTGTCACTGCTGGCCATCGTCCATTCGACCCTCCCCGCCACCTCCTTGCCGCCCCGCTTCTTCTCGCTCCCCAGCTCCCCATCCATTTGCATAAAATATGATCATGTCAAGGAGCATGGCCTGGTTGCTTTGGAGTCCTTGAGCCACCAGGAGGAGCAGCCTCATCATCATCTCACTGCTGCCGGCTTGATGCAGGCCGTGGCAGCGGAGATCCAGCTTAGCGAGCAGCAAGAGGCACTGCCACATCAACCCACCGATCATTCCGCCCCCTCGGACAATAGTCCTTATCCGGTTTATTCTAGTTTTTATCGGAATGATTCGGAAAAGGAGAACCATGGCTCCTCTGAAACAGAGATGGCCTGGAGCCACAACAATAGTGGAAAACTGAATGGCCAGACCACACCTATCGATGTCTCCGGTCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCCCACCCCTCGTCCTCGGCGACGGTCACCACCACGGGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTAGCATCAAACGAGAGCCCGAAGACTTGCGCAAGGATCCGAAGAATGGCAACATTACCGGTGGAGCGGCGGCGAACGGACAGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATGCACCACCAGCACCACCGCCATTCGCAAGTGAAGCTGATAGGCCCAGCACACCGCAGAACAGCAGCACCACCGCCGCGAGCAGCACCACCCCCACTCGGAATTCGGATTCGGAATCGGAAACGGAAGCAGCCGAAACCACAATAGAGATGTACGCGACCACGGGCGGCACTCAGATCTACCTACAGGTGAGACCCCGTGACCAAGACCGCGATCTTGTTGAGCGCTTTGTGACCCACCAAACCAACCACCTGCAGACCTCACATCCCAGCACGGCGAGCGGCGCGGGCGGCGGTGCCGGGCCGGCGGGCGCTGCCGGTGGCGGGGGCGTGTCCCTGCAGGCACAGAGCCCCAGTCCCGGGCCGTATATATCCGCTAATGACTACGGAATGTATACGGCCAGCCGCCTGCCACCCGGTCCCCCGCCCACCAGCACCACCACGTTCATAGCGGAGCCCTCGTACTACCGGGAATACTTTGCCACGGAAGGACCCGGCGGCTATGTGCCGGCCAGCACGCGATCCCTGTACGGCGACGTGGACGTCTCCGTCTCGCAACCCGGCGGAGTGGTCACCTACGAGGGCCGCTTCGCCGGCAGCGTTCCCCCGCCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGACGCCCCTCTATGCCAAAGCTATTACGGCGGCGGGTCTGACGGTGGATCTTCCAAGTCCGGACTCGGGCATTGGGACAGATGCCATAACTCCGCGGGATCAGACCAACATCCAACAGTCCTTCGATTATACGGAATTGTGCCAGCCGGGCACGCTGATCGACGCCAATGGCAGCATACCCGTCAGCGTGAACAGCATCCAGCAGAGAACGGTGGTGCACGGTAGCCAGAACAGCCCCACCACATCCTTGGTGGACACGAGCACGAATGGCTCCACCCGCTCCCGGCCATGGCACGACTTTGGGCGCCAGAACGATGCTGACAAAATACAAATACCAAAAATTTTCACAAATGTGGGCTTCCGCTATCACCTGGAAAGCCCCATCAGCTCATCACAGAGGCGCGAGGATGATCGCATCACCTACATAAACAAGGGCCAGTTCTATGGAATAACCCTGGAGTATGTTCACGATGCGGATAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAGGACGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCGGTCTACTGGAATCCGCTGGAGAGTTCCGCCAAGGGCCTGCCGTTGCACGTACAAATCGACACATTCGAGGACCCCAGGGACACGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACTCGGGATGAGGAGCGACGGGCTGCTAAACGAAAGATGACTGCCACTGGGCGGAAGAAACTGGACGAGCTTTATCATCCTGTGACGGATCGGTCCGAGTTCTACGGCATGCAGGACTTCGCCAAGCCGCCGGTGCTGTTCTCGCCAGCCGAGGACATGGAGAAGGTAGGTCTGCCATCCCATGCGGGGGGCACTGGCATGACATTCAACCCACTGAGCATGAGCAACGGCAACTCCAACTCCAACTCGCACTCGTCCTTGCAGAGCTTCTACGGGCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCTTTCCTGCTCCATGGCCAGAAGGTGGCTACGCCGACGCTAAAGTTTCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGACCAGAACATGCTATCCAGCACACCCCTGACCGACTTTGGTCCGCCGATGAAGCGTGGCAGGATGACGCCTCCTACCTCGGAGCGCGTGATGCTGTATGTGCGGCAGGAAAACGAGGAGGTCTACACCCCCCTGCACGTGGTACCGCCCACCACCATCGGCCTCCTGAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGATGACGATATGATATCGTTCTACTGCAATGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGATCTGTACGATGTGACGCTCACGGAGCTGCCCAACCAGTAG
Protein Sequence
MQEATSTTNYALSYTDWMAEPRYKKDQKEDKIQIKDNTPGAVINAKGFDHVEGCRCCVCFSQGLSLLAIVHSTLPATSLPPRFFSLPSSPSICIKYDHVKEHGLVALESLSHQEEQPHHHLTAAGLMQAVAAEIQLSEQQEALPHQPTDHSAPSDNSPYPVYSSFYRNDSEKENHGSSETEMAWSHNNSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATVTTTGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISIKREPEDLRKDPKNGNITGGAAANGQGSVITQKILHVDAPPAPPPFASEADRPSTPQNSSTTAASSTTPTRNSDSESETEAAETTIEMYATTGGTQIYLQVRPRDQDRDLVERFVTHQTNHLQTSHPSTASGAGGGAGPAGAAGGGGVSLQAQSPSPGPYISANDYGMYTASRLPPGPPPTSTTTFIAEPSYYREYFATEGPGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGLPSHAGGTGMTFNPLSMSNGNSNSNSHSSLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLSSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-