Basic Information

Insect: Drosophila equinoxialis
Gene Symbol: -
Assembly: GCA_018150345.1
Location: JAECWI010000600.1:3568574-3580176[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00057 0.046 14.3 2.0 1 23 740 762 740 762 0.98

2 8 9.7e-05 0.0078 16.7 1.4 1 23 794 816 794 816 0.97

3 8 0.14 11 6.8 0.4 1 19 824 841 824 847 0.81

4 8 0.024 1.9 9.2 0.0 3 23 854 875 853 875 0.96

5 8 0.00019 0.015 15.8 3.5 1 23 881 903 881 903 0.97

6 8 0.026 2.1 9.1 0.2 1 23 910 933 910 933 0.95

7 8 0.00024 0.019 15.5 2.2 2 20 940 958 939 961 0.91

8 8 0.049 3.9 8.2 8.7 1 23 967 990 967 990 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00057	0.046	14.3	2.0	1	23	740	762	740	762	0.98
2	8	9.7e-05	0.0078	16.7	1.4	1	23	794	816	794	816	0.97
3	8	0.14	11	6.8	0.4	1	19	824	841	824	847	0.81
4	8	0.024	1.9	9.2	0.0	3	23	854	875	853	875	0.96
5	8	0.00019	0.015	15.8	3.5	1	23	881	903	881	903	0.97
6	8	0.026	2.1	9.1	0.2	1	23	910	933	910	933	0.95
7	8	0.00024	0.019	15.5	2.2	2	20	940	958	939	961	0.91
8	8	0.049	3.9	8.2	8.7	1	23	967	990	967	990	0.96

Sequence Information

Coding Sequence: ATGGAAACGATTGTGCTCACGGAATACAGTATAGGCCACATTGCTCCTAAGATTGTGGATCAGTCACTAAATCTACTGGACAGCCTCAATACGGCATTGCGGTGCGATGCTATACAATTTTTGCTGCAGACGCTTAGGTGCAAATATCCAGAGGCCTGCGACCAAGTCGTTAGGAATCTCTTCAGTCACATAATAAATGATAATGGATCGGAAGGACGACTGGAAGGGGGAGGTGGTGCAGGTGGAGGAGATGTGGCGGAGCTAGCGAAGAGTAAGCAACTTCAGCTGTTGTTGGCCACCAAAAAAGAGATGAAGAAGGAGCCGACGGACACCAAAACAGAGATAAAGCGTGAGAGTAATGCCGAATCGACAGCTGGCTCGACAACGGATTTAAATCAAAATTTTGAGAAAATTCTTTGCAAGGAGGAGTTTATGTGCCTCGATGAGGAGGAGGAAGAGGATTTCAATGATGGTAACGATACGGAAAATTCATCATCCCAGCAATATCCTGCTCGTCGGAACAACAATAATAACAATGTGGATGCTATTGGTCCTGGTGATCCTCTCGATCTGATACAAACGAATGCAAGTGCCGGCGGATCTGTATTGGTGAAGAGAAAATATGCGGCCAGTTTTGGTAATCCCAATGAGTTGAAACACGACCAGGAGCAGGAGGAGATCGATGGCAAATTGATGATTAAACGAAAACGCATTAATCACATGACTCTGGCTAGTACTCTCACTACCGCCACATCGCTGAAGCGAAGGTTAGACGATCGGCTGGGCGTAGGCGTGGGCGAGGGCTATGTAATACAGGAGGATAACCAGTACACGATAAGGTATCATCACAGCTCAGGGCAGTTCAGTGAGAGGGCCTTTAAGGCCCAGTTTCGGGCATTGTTGAGATTGGCGCTGAGCCAGCACCACAAACCCTTCCTCAAGCAGTTCTACGAGAATTTCGTCATCAATGGACGATTGCTGGGTACCACTCCCTCGACGAAGATACTGAAAGCGTTGCGGGAGGAGCGATTGGAAGAGTGGAGGAGGCAGAGGGAACAGCGGATGCTTTTGGTGACCTTATTGAAACAAGAACGAGACCTGGAAAGGGAACGTGTCCAGGTGGAGGAGCAAGAGCAGGATCAGGAGCAAGAGCTAGAGCAGGAACAGGAACAGGATGAGCAAAAGCAAGATCTGCATTTGCCAACCATCTCATTTGGTGATTCCGAATTGGAATCAGAGACTGAGTCGCAATTATCCTCGGCCGCCCAAGAGATTATGAAATTCGAGGAGTTTATTGACGAGGGCGTAGGCGCTGGACGTCTGATTGATGGCCTGGAAATGGAGCCGGAGATTGATGAAATGCTAATCACTGGAGCCGATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAACCATGATAATGGACATCATATGAACAGCAGTGCAAATCTTGTGATTAATGGCCTTACATCAAGCAATAGCAACAATGGTCAGCAGCTAGCCCTGTCGGATGAGCACCATCAGCCAGTTAGCAAACCATTGTCATCGCATCTTCATCCGCATCCGCATCCTCTCCAGTTACCTAACCCCTCGATGGAAAACCATGTAATGAAAGGAAACCAACCCCCGCCACCAGGGCATAATATTATGACAGCAGCTGGCAGCGGCGGCAGTGCATCCACTTCCATGCATCAACATCACCATACAAACGAGATTCACTTGCATCATCATCACCAGCAGCAGCAACAGCAGAATCGATTCAATTCAAGCCAGAATCCGCTGACTATGATGGGTGGCATGATGCAACAACAGCAGCAGCATCAACAACAACAAAACGAATCGCAACACCACCCAATTATGCAGAGACAATTTTCTCCCATGATGAATAATCGCCAATTGCCATCATTGGCTGCCTTGTCGAATCTAAGTGGAGCTGGAGGAAATCCTCAACATCCCCCTCATCCACATACGCAATCGCATTCGCATTCGCACCCCCCATCCCCATCCCCATTCGCATCCGCATTCACACGGTGGCATGCCCTCAAATGCCAGGCAGTGCGGGAAGTGGGGGGGGCCGGTGGCAGTCACACGCCTGGCATTAAGAAGGATAAACCCAGCTATAATTGCCTATTGTGCCCTAAATCCTATCGCAAAAGGAAATCCCTGCTAGATCATTATAAAATGCATCCAGGCTATTGTCACGATTGTGGACAGCCAAATGGGAATACGCTAGAGGAAATCATTCAGCACAATCGCACGATGCATGTGAAGGAGTTCCCATTTGTGTGTGAGACCTGTGGCGAGTCCTATTCGCGAAAGCAACAGTTCCATGCCCATGTCGAGTCGCATAACAAGAAGGAATTCAAAACCTTTCCTTGCGGTGAATGCGGCTTAAAGTTCCCTCAAAAGAAGTTACAACAACATTTCGAGGAGACCGGCCATAAGGCCGATGGGGCCATCTGTGAGGTGTGCGGCGACGAGTTCCCATCAAAGAATGCCCTCTACCAGCATATCATTCGTGTCCACAAGCGGGACAATTTCTTTGAATGCCACATTTGCCATAATCGTTTCACCCTCAAGGCCAATCTGGAGCGTCACGTCCAGCTGCACACGGAGGTGAAGCGCACATATGTATGCGACCTATGCGGCTCATCGTATTTCACATATCCCGCACTCAAGGAGCATTACAGCAATGCCCACGTCGATGTCTCCGAATGCAAGTGTACGCTGTGTGGCAAGCGTTTTGGTTCAGCCAAATCACTGCAGAGGCACTTGCCATCCCACTCCGAAGAGAGGCCGCATTGCTGCAACTACTGCGATCAGACCTTTAAATGGAAAACGCATTTGGTGCGTCACAAGCAGACAATGCATGGCAATCAACCGCCACCGCCCAAAAAGGCCAAGCAGCGCTTTCCCAAGACGAATGAAGAAGCTGAATTGGCTGCCTTGACAGATATGCCGGGACCGCCGCCTGTGAAAGCCACCAAAAAGTCTAATGCCAGCAAGACCAAAACCCAGACTGGTTCAGGAGCAGGAGCAGGAGGTGGCAACCAACAGCAGCATCAAAAAGCAACGCCTACACCACCTCCTCCAGTGTCGACGACGCCGGGCTGTATTCAACAGGATCAATTCAATGCAGCAATGGTCAGCAGCAACAGCTCTCAATCCTCGACAGCTTCTACGTCGCAACATTCGGTGTCGACGAGGCTTCCAATGAATGTGCCGCCTGCCCAGCAGCAGCAACCTGCAGTCAAACCCCAGCCACCACAACAACAGCAACCGCCCCAACAACAAGATCCAGCTCTGGCTGGTGATCTATTGAGCTTCCAGCATATGTGGCCGGCGCAAGGCTTTAATCAGGCCGCGCCTCAACAGCCACACCAACCGCAGCAACCCCAGCAGCAACAGCCTCAGGCCCAGCCCAATCCGAGGGGCTATCCAGGTGCAGTGATGCGAGCGGGTCCCGTCTATGGAGGATCACCGGCAGTGGCCTACGAACAACATTTGGGCGATCAATTGCAGGTGGTCTCTGAGCAACAGAAGCAAAATAGCTTCCAGCCATATCATTCCCATGGATTGCAGCCTCCACCACAGCAGCAGCCACAACAACAAGCAATGCATCCCCATCTTTTACCACCACCAGGACCTCATGGAAGTGTCTATGAGCGAACCGGGGGAGTTGGTGTGGGTGTGGGTGTAATAGGCGTTGGCGGCTATCCAATGCTCGGCGATGAATCCAAGCCCGTCCTGCCGCCTATGATGGGTGGAATGATGCAGCAAATTCCCCATGGTCAGCCGGATTTACTATACTATCCAGTGAAGAACGATTGA
Protein Sequence: METIVLTEYSIGHIAPKIVDQSLNLLDSLNTALRCDAIQFLLQTLRCKYPEACDQVVRNLFSHIINDNGSEGRLEGGGGAGGGDVAELAKSKQLQLLLATKKEMKKEPTDTKTEIKRESNAESTAGSTTDLNQNFEKILCKEEFMCLDEEEEEDFNDGNDTENSSSQQYPARRNNNNNNVDAIGPGDPLDLIQTNASAGGSVLVKRKYAASFGNPNELKHDQEQEEIDGKLMIKRKRINHMTLASTLTTATSLKRRLDDRLGVGVGEGYVIQEDNQYTIRYHHSSGQFSERAFKAQFRALLRLALSQHHKPFLKQFYENFVINGRLLGTTPSTKILKALREERLEEWRRQREQRMLLVTLLKQERDLERERVQVEEQEQDQEQELEQEQEQDEQKQDLHLPTISFGDSELESETESQLSSAAQEIMKFEEFIDEGVGAGRLIDGLEMEPEIDEMLITGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNHDNGHHMNSSANLVINGLTSSNSNNGQQLALSDEHHQPVSKPLSSHLHPHPHPLQLPNPSMENHVMKGNQPPPPGHNIMTAAGSGGSASTSMHQHHHTNEIHLHHHHQQQQQQNRFNSSQNPLTMMGGMMQQQQQHQQQQNESQHHPIMQRQFSPMMNNRQLPSLAALSNLSGAGGNPQHPPHPHTQSHSHSHPPSPSPFASAFTRWHALKCQAVREVGGAGGSHTPGIKKDKPSYNCLLCPKSYRKRKSLLDHYKMHPGYCHDCGQPNGNTLEEIIQHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEFKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGDEFPSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRTYVCDLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTMHGNQPPPPKKAKQRFPKTNEEAELAALTDMPGPPPVKATKKSNASKTKTQTGSGAGAGGGNQQQHQKATPTPPPPVSTTPGCIQQDQFNAAMVSSNSSQSSTASTSQHSVSTRLPMNVPPAQQQQPAVKPQPPQQQQPPQQQDPALAGDLLSFQHMWPAQGFNQAAPQQPHQPQQPQQQQPQAQPNPRGYPGAVMRAGPVYGGSPAVAYEQHLGDQLQVVSEQQKQNSFQPYHSHGLQPPPQQQPQQQAMHPHLLPPPGPHGSVYERTGGVGVGVGVIGVGGYPMLGDESKPVLPPMMGGMMQQIPHGQPDLLYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00523971;
90% Identity: -
80% Identity: -