Dequ004512.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- hang_1
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000002.1:9949941-9962291[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.19 15 6.4 1.0 3 23 318 339 317 339 0.93 2 15 0.14 11 6.8 3.5 3 22 443 462 441 462 0.89 3 15 0.00041 0.033 14.7 3.3 1 22 538 559 538 561 0.90 4 15 0.047 3.8 8.3 0.1 2 21 573 592 572 593 0.93 5 15 0.00048 0.038 14.5 0.2 2 23 729 751 728 751 0.95 6 15 0.0014 0.11 13.1 0.1 1 23 759 782 759 782 0.96 7 15 1.1e-05 0.00089 19.7 0.1 2 23 870 891 869 891 0.97 8 15 0.92 73 4.2 0.8 2 13 986 997 985 998 0.90 9 15 0.53 42 5.0 0.1 5 23 1013 1032 1012 1032 0.93 10 15 0.82 66 4.4 1.4 2 20 1040 1058 1040 1058 0.96 11 15 3.9e-05 0.0031 18.0 0.4 3 23 1152 1172 1151 1172 0.98 12 15 0.0035 0.28 11.8 0.1 1 23 1207 1229 1207 1229 0.97 13 15 0.00041 0.033 14.7 0.7 2 23 1310 1332 1309 1332 0.93 14 15 1.9 1.5e+02 3.2 0.1 2 20 1352 1370 1351 1372 0.90 15 15 0.0044 0.35 11.5 0.3 3 23 1387 1407 1387 1407 0.98
Sequence Information
- Coding Sequence
- ATGTGGCCCATAACACAACAAGAAATGGAATGTATTTCGATCATCAATAGCTATGCAGCCGATAAGGAGCCTCTGACTACCAAAATCTATAATTGCGTCAATATCAAGATCACACCACAGGATCGTTTATCACAACAGATTTGCCATGCTTGTATTAGCTATCTGAATTCATGGCAAAGTTTTAAAAATCGTTGCCTTAGTTCGCAAACCAAACAGCGGCAATGGCTGGAGACGTCCACTGAGTCGACGACGACGACAACGTCAAGTAAAAGCAAACTTTTGAGCTATTTAGATTTGAATAGAAGACGTGGTCCTGGTCATGTAGTTGCTCCATCTACAACTAATCCCTCTGGTCATTCCACTTCCATGCGCAAACTGAAAACCAAAATGTATTTACCCTTAGATATAACAGTCCCATCATCATCGCCAATACATCTTCCTGGTGCTCCTGCACCTCCGCCTCCGCCTCCCCCTCCTTCTGTTCATCCCTCAGCTCCAATCGCATCTATGTCAACTGCTGTCTTACCGCTACCACCGCCAAAGCCACTGTTAATGCCAATATCGGTGACTGCCCCATCAACATATTCGACTACAACGACTGCGACTGCGACTCCGCTGCTAATGCCGGTGACGCTGCAAAGCGCCACACAGCAATTGCGATTTTTCAGACGCTATTCCTATAATCCCCTGCCCGCTGTGCCCATCAAAGATGAGCCTATCGATGATACCGATGATGACTATCAGATGAAGTCCATAGATGAATCCATAGACGATATGGTTGATCCCACAATGTTCCTAGAGCGTTCTGAGCACGAAGGCGATGTCCCATTGATGACTTCGGACTATGATTATACGGCTCAGCATGGCGTTACAGCAGCTGCAGCAGCCGCGGCGCTACCAGCTAGCGCTGTGGCCAGTGTCGCCGCTGCTGGTGACTCGAAAGTGGCCAGTTGCCGGGCATGTAGCCTACAGTTCTCCACACGAGCCAATGCCCGACGGCACGAGCGTAATCTGCATCCGAATCTCTTTCAATTGTCCACCGATTCGCCCAACAATACCCCCGTTACAAAGCCAACGCCGGCTCTGGCCGCCGCATTGGAAATCCAACGGGCCGCTGCTGCGGCAGCCTCAGCTGAGGCAAGTCGTTCCGGTGGCAATATGTCAACGCAAAAGTATCGTCAGGTGGTAATGAATGCCTTTATCAAATGTGAAGCTGGTGGCTATGACTACGATAATCCCGAGCAATATCAATCCTTGCTGAGTCGCGACAAAGTTGAATTTATCGAGCAGAATGCCGAATTCCTTGAGCAGTATCAGACGATGACTTGTCGTTGTTGCAATAAGTTCTTTAGCACCTATAAGAATTTTATGGCCCATGTACGCAAGAAGTATCCATTGTTGCCGCGTAATCTCTGTTTCAATTGCCTCAAGATGAATGACTCGAAGGCTTTGTTTATATCACATCTGAAGAAGCGCAACTGCATCAATCTGTACAGGGTTATGAATGCCATCAACAACAAGCAGCAGCAGAACGATGGAACCTCCGTTGCTCCGTCGCCTGCTGCTGTTCCAAGAAGCTGCGGGCCAAAAGAGCTTCTGGTCAATAAGCTATACGAATGTAAACTCTGCCCAAAAGGTTTTCGCACCAAACATGAGTTCCGTACCCATGTCTATGATAAGCATGCGGATGTTCAGCGTAAGGATAACAATTCCATTCAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCTGTGGACAGGCGGCGTCATTACAACAACATGGACTGCATTGTTCGCTTGCGTTGCATGACCTGTGATGCCAAATTGGAGACGCATCAGCGATTCCTCGATCATGTCTATCAGGATCATTTGGGCGGCTTGAGCAGTGATAATGTCTCATCGACGACTGTGATTGGAACAACTAATGTGGATAATTCCCATTCGCCTGGCAAGAAGAATCTGCTGGGTGCATTGGGCATAGGATCGGCAGATGAATCTCGTAGTGCTGCCACGCCATCACTAATAACATCTACACCAAAGCCAGCTGTAGCTGCTGCTGCTTCCACAGTGACAGCTAGTGGTGGTTTATTAGGTGGTGGAGCCGTGGCATCGTCGGCGGCGGCGGCGGCCAATCGTGATCGTGATGGAGCTCCCAAATCTCAATATTTCTCCCGCATGCCCCAGGTCTGTCCCATTTGCGGCCAGCAGTATAACAATTACAACAATGTTCTGCGTCACATGGAATCCAAGCATCCCAATAAACTGCCCGAAACATACAAATGTGTACGTTGCGGCTTGGGCTATCCACGAATCTCTTATCTGCGTGAGCATATGATCAATGTCCATGGCGTTGATAAAAATCGCCATTCTGGCGGATTTGAGTATATTGTTAATGCGGATGCCGTTAAACTAGCCGATGGCAGTACACCCAATGTCTATACAGGCCGATATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGATGACGACGATGAGGGAACAACTGGCAGTGTGGCCAAAAAGATACGACTGGATGACAGCAGTAATAATAGCAGTCTGATGGGCATGGCCGCAACACAGCAAAAGGAGTGTCCCATTTGCAATGCAGTATTCAGCAACAATATTGGTCTATCCAATCACATGCGTTCACATTATACAGCCTCTGCAAATGCCTCTGCATCGGCGAATGCTTCTGCCTCGACGTCTGCTTCATCTAGCACAAATGCCGCTTTGGCTGCAGCCAATCGTATGACACCCAAATCATTGACCATAACAGCGGCTCCTCCAATTACAGCGGATACACCAACGCCATCAAATAAGAGCAAAACAACAATAGCATCGGCGGAGACAAACTCGGCGGCCGCACCTCAAGTACAGGCAATACAATTTCGTCGCAGTTTGGATCAGGCAGCCGATCGGCGATTCCGGCGTATGCGTTGCCGCATATGCCAGCGACGCTTCAGCTCCAAAAAAATCCTATCGTTATCACATGCTTACCGACCATCAAGTGCAGAATACTGCGGCAATGTCTACAGTGGCAGAAAAAGTCTCTGGGTTCATCGCTATAAGAAACATCCCCAAGTGCCTGATCCGGCCGAGTGTTGCCTATGTCGCAAAATATTTTTCGATCGTCAAATGCTGGACAATCATATGCCCACTTGCAATCGTAAGCCGATAACCTCCACAGGCGCACATCAACAACCACAACAGCAGCAGCACCAAAACCAACAAGATCAGCTGAGACGTGGTCTAGTTGTTTTCAAGCACAAAACTGGCGACGATGATGACGATGAGGAAGAAGATGTTGAACAGCAATCACAACTTAATTTAGATGATGGAACTGATGAAGCTTCTGTGCCCACTGCTGCGGCGGCTCCCTCCTCGTCATCGTCGGCGGCGGCTCATGTCAAGATACGCATACCTGAGGTGGCTTGCACCATTTGTGGAGCACGCTTTAACGATCAGGAAATGTTCACTAAGCACATACAGAAACATGAACAGGAATTGTATGTAGATAATCCATTAGCGGCTATGTTTGACGATAGTCCAGCCGATCCGGGGCAATTCCAAGTGGAGCGGCAGAACGAGAATGGGGAATATGCATGCGATTTGTGTGCCAAGACATTCCCACAAGTGATTGCACTTAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGAACAACAACAACAACAACAATTCGATGTTGCATCTACGCGAACTGCATGCAGTGGGCTTAGTGCCCAATCAACAGCAGCAACAACTGAACTCCAGCCACAATCAGAGCCAGCAGCAGCAGCAGAGCCACAATTCATCAGCGACCTCAACGACGGGAGCAAGCAAATCGCTGAAACGGAAACGTGAATTGAAATGTGATTACTGCGCCTCCACCTTCATCAGCAACAACAATCTGCGTCGTCATATGTATGAGCTGCATAAACATGAGGTTAGCCATTTGCCCGAACCACCGGTCATTGTGGTTGATGAGCCGCTCTCATGCCGCCGTTGTGATCTTCAATTTGATAGCAAAGAATTGTGGATTGAACACAAATTGGCCGATGCGAAAGTGGTGCGTCCTTTTTGTCCCTTTCAATGGGGATGTGATCTATGTGGCGAATACTTGTCACGCAAAGAGAAGCTCATCAATCATATTAACAATCACCTTAAGGAGGATGTTATAACAACAAACTGA
- Protein Sequence
- MWPITQQEMECISIINSYAADKEPLTTKIYNCVNIKITPQDRLSQQICHACISYLNSWQSFKNRCLSSQTKQRQWLETSTESTTTTTSSKSKLLSYLDLNRRRGPGHVVAPSTTNPSGHSTSMRKLKTKMYLPLDITVPSSSPIHLPGAPAPPPPPPPPSVHPSAPIASMSTAVLPLPPPKPLLMPISVTAPSTYSTTTTATATPLLMPVTLQSATQQLRFFRRYSYNPLPAVPIKDEPIDDTDDDYQMKSIDESIDDMVDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAAAAAAALPASAVASVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAAALEIQRAAAAAASAEASRSGGNMSTQKYRQVVMNAFIKCEAGGYDYDNPEQYQSLLSRDKVEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNAINNKQQQNDGTSVAPSPAAVPRSCGPKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNVSSTTVIGTTNVDNSHSPGKKNLLGALGIGSADESRSAATPSLITSTPKPAVAAAASTVTASGGLLGGGAVASSAAAAANRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDEGTTGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASANASASTSASSSTNAALAAANRMTPKSLTITAAPPITADTPTPSNKSKTTIASAETNSAAAPQVQAIQFRRSLDQAADRRFRRMRCRICQRRFSSKKILSLSHAYRPSSAEYCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKIFFDRQMLDNHMPTCNRKPITSTGAHQQPQQQQHQNQQDQLRRGLVVFKHKTGDDDDDEEEDVEQQSQLNLDDGTDEASVPTAAAAPSSSSSAAAHVKIRIPEVACTICGARFNDQEMFTKHIQKHEQELYVDNPLAAMFDDSPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLNNNNNNNSMLHLRELHAVGLVPNQQQQQLNSSHNQSQQQQQSHNSSATSTTGASKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDEPLSCRRCDLQFDSKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVITTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -