Dequ016429.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- -
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000506.1:6883468-6885945[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.064 5.1 7.8 5.9 3 23 283 303 281 303 0.96 2 12 0.0077 0.61 10.8 0.5 1 23 309 334 309 334 0.93 3 12 0.0008 0.064 13.8 0.5 1 23 341 366 341 366 0.95 4 12 0.00018 0.015 15.9 2.4 1 23 375 397 375 397 0.97 5 12 8.6e-05 0.0069 16.9 0.1 1 23 404 426 404 426 0.97 6 12 0.007 0.56 10.9 0.5 1 23 432 454 432 454 0.97 7 12 0.15 12 6.7 1.8 1 23 460 483 460 483 0.96 8 12 0.011 0.91 10.2 4.5 1 23 489 511 489 511 0.96 9 12 0.00031 0.025 15.1 2.4 2 23 518 539 517 539 0.96 10 12 1.5e-05 0.0012 19.3 1.5 1 23 635 658 635 658 0.96 11 12 0.041 3.3 8.5 7.1 1 23 664 686 664 686 0.94 12 12 1.9e-06 0.00015 22.1 2.4 1 23 692 714 692 714 0.99
Sequence Information
- Coding Sequence
- ATGAATGAGGGAAGTGCGTTATCGTCGTACTCCATTCACTCGGTGTGCCGCATCTGTTTGAATCATTTGCAAAATGGTCCCGTCTTCGATCTATTCCTAATACCCGGACTGGCCAAGAAGCTGTGTGTGTGCACATCGCTGTCGGTGGAGCAGCAGGATGGATTCCCCCGCAATATATGCTGCACCTGCCACACCAAATTGGATGATATGCATCAGTTTCAGAAATTGTGCGTCGATTCGGTGCAGAAATTCAAAGAGATGTTGGACAACAATGCATTCCAGACCAGTTTCGATGTGCTGGACCCCAGTGTGGCGGCTCAGGATATGCCAGCGCAGGAAGATGATGATCATATTAACTTTGATCCGTTGCTGAATTCCAAAATTGAAATCATTGAAAATGAAGAGGATGTGTTCAAAATGCTCGAGACTGTGGATAAGGAAGTGGAGGAGGTGGAGAAGCCAGTGGACGATGATGATGATGACGACGATGATCGTATGGATAAATTCAATGATGACGACGACTACTCAATGGAAAGCGGCAATGATAATGATAGAGATGCAGATTTTCAATTAAATAGCAGCGATGATGATGTACCCTTGTCCCAGAGGACACGACCAGCTCAAACCCGTAAGGCCAAAAAGGTGACCAAACAGCAGCAGCAGAAAAAGAAAAAGCAGCAACAAACTAAAAAGGCCAAAAAGGATGCCGTCGATGAGGATGAGGATGAACTGAGCAGCTCTTCATTTGACTCCGATGACGATGAGGATGGCGACAGTGATTCCAAATCGAAGGGCAAACGCAAACGGATACCAGCCGATGAGAGGCACTTGCATCGTCTCATCGATTGCCACATTTGCCATCAGAAGTTCAAAAAGGCCATTCGCTATGAGGAGCACATGAAGCATCATAATGATCTCTTACCCTTCCAGTGTACGGTCGAGTCATGCCGCAAGGGATTCACCACAGCCAACGGTCTGAGAGTTCACGTAGAGCACGCCCATACGGAAACATCGGAAATGCATCCATGCACCGTTGAGGGGTGCAATAAAAGCTTTGCCCGCCCCGTTTTGCTCAATTTCCATATGAAACGTGTCCACAAAATCAATACTCCCCAGCGGGACTTCCCCTGCACCGAATGCGAAAAAGTATTCCGTTGTCCGACCGCACTCAAGAAGCACATGTATAAGCACACGGGCGAGGAGCTGCCATTTGCCTGTGAAATCTGTGGCAAGCGATTCCCCATCAATAGCGTCCTGCGAGATCACTTGCTCCGGCACGCTGGCATCAAGAATCACGTCTGTCCCTATTGCGGAGTGGGTAAGACCACTCGCCAGGAGTGGAACAAACACATCCTGACCCATACCAAGGAGAAGAAGTACGCCTGCCGGCAATGCGAACACACATCGCACAACAAACAGGCTCTGGCCAATCACGTGAAGGTGGTGCACGAGAAACGAAAGGATTTCGCCTGCCAGTATTGTGGCAAAACGTTTGGCAAGTCGCATGCCTGCAAGATCCATGAGCGTAGTCACACTGGGGAGAAGACATGCGAATGCAAGATCTGTGGCAAGGTATTCCTGTTTGAGAAAGGTCTTACCAAGCATTTAAAGACGCACGAGAAACGTGATTTGCCCCGTACGCAAACAAATCCCGTTAATATACCCGATCCGACTCTGCAGAATCAGGCCTCCACCTCTGCCGATGCGACGGCAGCATCGAATTTCGCAGCACCCGCTGCCCCGACCACTACTCAAACTGTGCCCAAACACAAATCCAACAATTCGGGACGCGTCGAGCGAGTGGATATCTCGCAATTGGCTGGCACTGTAGTCAATCCCATACCATCGGTGAATCTTCCGTCATGGTCGCCTCAGGTCAGTTTCACCAAGAAGGAGGGCCAGCACATTTGTCCCGATTGTGGCAAAGGTTTCAATCACGTCAGCAATATGAAACTCCATTACAAAGTTGTCCATCAGAAGGTTAAGGATTTCTGTTGTCGCTTCTGTCCCAAGCGATTTGCCAAGAAACAATATTTGCGTCATCACGAATACATCCATACCGGTGAGAAGCCCTACGAGTGCAAGATCTGTGGCAAACATTTCCGTCAGGAACAGGTTCTCAAAACGCACATGAAGGTGCACGATAAGCCACCAAAACCTCCAAGTAAATCAAGCAAAGAAGGTGCACCCAAATCGGATCATCAGCCAACGAAACGCCAGCAACCGAAGAACTTTGAGCAATATCAGGATCCGGCTGCCGAGCGAGCTGCCGCCACAGCTGAGCTGTTGGCATTCCAAATCGAAGAGAATGAGGCCAAACGCAAGGCTGAAATTGAGCTAAAGAAGATCCAAGAGGCGGCCTTCGAGCAGCTAAATAAGCTGCAAAAGCAACAGAATACCTACGATGGCTTCTATGCCCAAAAGAACGCCGAGGAGGGCTCCTCCACTTTGGATTCCCTTAAGTTTGATCACGTGTAA
- Protein Sequence
- MNEGSALSSYSIHSVCRICLNHLQNGPVFDLFLIPGLAKKLCVCTSLSVEQQDGFPRNICCTCHTKLDDMHQFQKLCVDSVQKFKEMLDNNAFQTSFDVLDPSVAAQDMPAQEDDDHINFDPLLNSKIEIIENEEDVFKMLETVDKEVEEVEKPVDDDDDDDDDRMDKFNDDDDYSMESGNDNDRDADFQLNSSDDDVPLSQRTRPAQTRKAKKVTKQQQQKKKKQQQTKKAKKDAVDEDEDELSSSSFDSDDDEDGDSDSKSKGKRKRIPADERHLHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSEMHPCTVEGCNKSFARPVLLNFHMKRVHKINTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYACRQCEHTSHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKTCECKICGKVFLFEKGLTKHLKTHEKRDLPRTQTNPVNIPDPTLQNQASTSADATAASNFAAPAAPTTTQTVPKHKSNNSGRVERVDISQLAGTVVNPIPSVNLPSWSPQVSFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKICGKHFRQEQVLKTHMKVHDKPPKPPSKSSKEGAPKSDHQPTKRQQPKNFEQYQDPAAERAAATAELLAFQIEENEAKRKAEIELKKIQEAAFEQLNKLQKQQNTYDGFYAQKNAEEGSSTLDSLKFDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00571368;
- 90% Identity
- iTF_00523894;
- 80% Identity
- -