Basic Information

Gene Symbol
NCOR1
Assembly
GCA_018150345.1
Location
JAECWI010000002.1:9446471-9453355[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-08 0.0001 22.5 0.0 3 43 489 529 488 531 0.97

Sequence Information

Coding Sequence
ATGATGATGAAAAGCAAAAAGATTGAGGGTAGAAGATTTATCCAACAACCGGCAGCCTATAGCATTGGTCCAGTGCCCAGTGCATACCGCGACAATCACTATACGCGCATATCCCAACAGATGCAGGGAGCCCCGGTGCCATCGGAGTATCAACGTGTGGCCGCACGTGCTGCTGCTGCTGCAGCAGCTGTTGGTGGTGGTGGCAAAGGTGGCGGCGGAGTTGTCCAAGTGGGTGGACCACAATCTGCTGGAGGTGGTCCTGGTGGCGTAGGAGGAGCAAGTGGAGGACCTGGTGTTAGTAGTGGATCAATTTTAACTCCACTCTCAATGCTGAAAGTGGATACATTGCCACCGCAACCGCCACAGTTGACAATGTCGGCAACGCTGACACCTAGACTCACTGCATCCTCAGTGGTATCCTCGGCGGCACCACCCTCCTCAATGGGTGCGGTAACCGTGTCAACTGCCCCAGCGGCTCCTGGCAGCAGCAGCGGCATTGGCAGCAGTATGTCCACCTCGGTTAGCATATCGTCATCATCCTCATTGGCTTCAACAACCAGCTCCTCCTCATCCAGCACAGAAGCGTATCATCCACAGGTCGAGGCCATTTCACCCACCTTGCCCAGCGATAGCGCTGATGAACGTGGTCGCACCACCGCCAAGGAGGATCTGCTCCAGCAGATCCAGAAAGTGGACATTGAAATCAAATGTGCCGAAACCACAATGGATACGCTTCGCAAGAAAGAGAAATCCTTGATGGAGGATGCAGCGATAACCAAGCAACAGAAGGTGGCAGCCGAGCAAGTAGCTGCCGCCCATGGTGACGAGGTTATCGAATTAGCCTGGCGCACACAAATGCTGGCCGAAAAGATCTATGCGGCGAATCGTAAGACCGCAAATGCCCAACATTCCATGGTGAGTCGAGCCAATGGCCTGGAACGTGAGCATCATTCCTGGCTACCGCTGTACAATCAGCCGCTGGATGTCGAGGTCCTGACAACGCTTATCAAGCGGCATCAGACACAGGTGAAGGCGCCCCTCCTGGAGCACATATGCAAACTGAAGGCCGAACGCTGGGAGCACAATCAGAGTCTGGTTGAGAAATATACCAAGGATCAGGCCGATTGGCAGCGCCGATGCGAACGTGCCGAATCGAGTGCCAAGCGAAAGGCGCGCGAGGCCAAGAATCGGGAATTCTTTGAGAAGGTCTTCACGGAATTGCGCAAGCAACGCGAGGATAAGGAGCGCTTTAATCGCGTCGGCTCACGCATCAAATCGGAAGCCGATCTCGAGGAGATTATGGATGGTCTGCAAGAGCAGGCGCTGGAGGATAAGAAGATGCGTTCATATGCGGTTATACCGCCTCTCTTGTACGATGCCCGGCAACGTCATTGCGCCTATCACAATGAGAACGGACGCATTGAGGATATGGTGGCTGTGCATCAGGAGCGCAAGGCTCTCAATATGTGGACAGCCGGCGAGAAGGAGACCTTCAAAGAGAAATATCTACAACATCCGAAGAATTTTGGCGCCATTGCCGCCAGTTTGGATCGCAAATCGCCGCAGGATTGCGTCCGCTACTACTACCTCAGTAAGAAGACAGAGAACTACAAGCAGCTGTTGCGCAAATCGCGTCAGCGCACCCGCAGCTCTCGCAATCCGGCCAAGGCCCAGGCCCAGCAGCCGCAGTGCATCATTGATTCACTGACAACGGGCGTTACGACCCGCCTGCAACGGGAGCAGCAACAAAAGTCTGGCAATCGCTCATCCGCCGTGGCGGAACGTGAGCGTGCCGAGCGAGCCGCAGAACGTGAACGGGTGGCCGAAAAGGCAGCAGCAGATGCAGCCAAAGCGGCCGAAAGTGCCGCCGAGAAAGCAAGTGCGGTCACTAAGGCTGTGGAAGCTAATGCTGTTATGCCCGCTACAACGTCTACGGAATCCGTTGAGCAGTTGGCCAAAGGTAAAACAAGTGCCACGGCCACTAGCAAAGATAGTTACAATGCAGTTAATAGTAGTAGTGCGGCCACATCCTCAGCAACAACAACAACTGCAGCAACGCCGGCAGTTAGTGTGGCTCTCAATGGCTTTAAGCCTGGCTATCAGAGTCTTATCGGTGTAATGGCCGGCAATGTGAAGGCGTCAAGCACAGGTACAGGAGGACACAGTAATAGTAACGATGAAACGGCAATAGCAGCAACATCGACAGCAGCAACAACAACCCAAACAACATCCACACTGGGAGGAGGAGGATTGGCAACAACAGGAACGACAAATGCAACAAACATTGGCGATAAAATCGTCAAGCAAACGGCAACATCGTCTTCATCTTCATCTGCTGCCTCCGCCCCTTCCACAGTTGTGAGTGTGTCAGAGCAGGGCAGCAGCGTGGGCGGCAGCCTAACAACAGCCACAACAGCGGGCAATTATTTGGGACAAAAGTTGAAGGCAGCCCAAGTAGAAGGTTTGGGTGCCGGCAATGAGATACACTCGGATGTTAGCGATGCCAAGAAGAAACGTTTCGAATTGGCATCAAATGAGGCAACTAATGTAACCGCTGCATCGATTATGTCAACGGCGGCATCGGCGACACCAACATCAACCACAATGGCCACTTCGTCCATGCCAATGCCCCTGCTGGCTGATGGCAGCAATACCAATGTCAATATGTTAAATGCCAGCGATGTGATGGCTCTGGATGGCGGCAAAGTGGAGCCCATCAAAAATGCATTTTGCCTGGCAATGTCCTACAATGCGTCTGTCTGCTCCTCCTCCTGCTCCTGCTCCACTCTGTCTGTTTAA
Protein Sequence
MMMKSKKIEGRRFIQQPAAYSIGPVPSAYRDNHYTRISQQMQGAPVPSEYQRVAARAAAAAAAVGGGGKGGGGVVQVGGPQSAGGGPGGVGGASGGPGVSSGSILTPLSMLKVDTLPPQPPQLTMSATLTPRLTASSVVSSAAPPSSMGAVTVSTAPAAPGSSSGIGSSMSTSVSISSSSSLASTTSSSSSSTEAYHPQVEAISPTLPSDSADERGRTTAKEDLLQQIQKVDIEIKCAETTMDTLRKKEKSLMEDAAITKQQKVAAEQVAAAHGDEVIELAWRTQMLAEKIYAANRKTANAQHSMVSRANGLEREHHSWLPLYNQPLDVEVLTTLIKRHQTQVKAPLLEHICKLKAERWEHNQSLVEKYTKDQADWQRRCERAESSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLLYDARQRHCAYHNENGRIEDMVAVHQERKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAQQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASAVTKAVEANAVMPATTSTESVEQLAKGKTSATATSKDSYNAVNSSSAATSSATTTTAATPAVSVALNGFKPGYQSLIGVMAGNVKASSTGTGGHSNSNDETAIAATSTAATTTQTTSTLGGGGLATTGTTNATNIGDKIVKQTATSSSSSSAASAPSTVVSVSEQGSSVGGSLTTATTAGNYLGQKLKAAQVEGLGAGNEIHSDVSDAKKKRFELASNEATNVTAASIMSTAASATPTSTTMATSSMPMPLLADGSNTNVNMLNASDVMALDGGKVEPIKNAFCLAMSYNASVCSSSCSCSTLSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-